MGE detailed information
MGE type: Genomic_island MGE length: 25530 bp
Accession: NZ_CP062254 Location: 1457241..1482770 Organism: Pectobacterium parmentieri strain QK-5 Replicon: chromosome
Accession: NZ_CP062254 Location: 1457241..1482770 Organism: Pectobacterium parmentieri strain QK-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IG623_RS06770 () | 1452779..1453726 | + | 948 | WP_014699058.1 | omptin family outer membrane protease | - |
| IG623_RS06775 () | 1453840..1454205 | + | 366 | WP_014699059.1 | DUF4751 family protein | - |
| IG623_RS06780 () | 1454303..1455334 | - | 1032 | WP_014699060.1 | methionine synthase | - |
| IG623_RS06785 () | 1455362..1456339 | - | 978 | WP_014699061.1 | DUF1852 domain-containing protein | - |
| IG623_RS06790 () | 1456819..1457061 | - | 243 | WP_103808481.1 | GIY-YIG nuclease family protein | - |
| IG623_RS06795 () | 1457208..1457666 | + | 459 | WP_071822844.1 | NUDIX domain-containing protein | - |
| IG623_RS06800 () | 1457739..1458308 | + | 570 | WP_014699063.1 | TetR family transcriptional regulator | - |
| IG623_RS06805 () | 1458371..1458841 | + | 471 | Protein_1318 | nuclear transport factor 2 family protein | - |
| IG623_RS06810 () | 1458931..1459350 | - | 420 | WP_081439987.1 | IS3 family transposase ISStau1 | Transposase |
| IG623_RS06815 () | 1459510..1459800 | - | 291 | WP_014699065.1 | IS3 family transposase ISHar2 | Transposase |
| IG623_RS06820 () | 1459866..1460195 | + | 330 | Protein_1321 | IS30 family transposase | - |
| IG623_RS06825 () | 1460369..1460998 | - | 630 | WP_103808445.1 | hypothetical protein | - |
| IG623_RS06830 () | 1461429..1462643 | - | 1215 | WP_103808444.1 | Prophage integrase IntS ; Integrase | Integrase |
| IG623_RS06835 () | 1463004..1463174 | - | 171 | WP_155116481.1 | hypothetical protein | - |
| IG623_RS06840 () | 1463356..1464189 | - | 834 | WP_103808443.1 | DUF4942 domain-containing protein | - |
| IG623_RS06845 () | 1464307..1464627 | - | 321 | WP_103808442.1 | TA system toxin CbtA family protein | Toxin Detail |
| IG623_RS06850 () | 1464697..1465032 | - | 336 | WP_103808441.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IG623_RS06855 () | 1465069..1465542 | - | 474 | WP_121301511.1 | DNA repair protein RadC | - |
| IG623_RS06860 () | 1465626..1465859 | - | 234 | WP_103808798.1 | hypothetical protein | - |
| IG623_RS06865 () | 1465877..1466350 | - | 474 | WP_103808799.1 | hypothetical protein | - |
| IG623_RS06870 () | 1466386..1466955 | - | 570 | Protein_1331 | hypothetical protein | - |
| IG623_RS06875 () | 1467137..1467835 | - | 699 | WP_121247005.1 | DeoR family transcriptional regulator | - |
| IG623_RS06880 () | 1468205..1469080 | - | 876 | WP_103808734.1 | GTPase family protein | - |
| IG623_RS06885 () | 1469169..1470086 | - | 918 | WP_103808735.1 | hypothetical protein | - |
| IG623_RS06890 () | 1470589..1470801 | + | 213 | WP_103808736.1 | AlpA family phage regulatory protein | - |
| IG623_RS06895 () | 1470907..1471440 | + | 534 | WP_103808737.1 | secretoglobin family protein | - |
| IG623_RS06900 () | 1471450..1471828 | + | 379 | Protein_1337 | hypothetical protein | - |
| IG623_RS06905 () | 1472213..1472824 | + | 612 | WP_103808745.1 | inovirus Gp2 family protein | - |
| IG623_RS06910 () | 1473205..1475094 | + | 1890 | WP_103808738.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| IG623_RS06915 () | 1475317..1475853 | + | 537 | WP_103808739.1 | hypothetical protein | - |
| IG623_RS06920 () | 1475863..1477545 | + | 1683 | WP_103808740.1 | hypothetical protein | - |
| IG623_RS06925 () | 1478280..1478786 | - | 507 | WP_103808741.1 | hypothetical protein | - |
| IG623_RS06930 () | 1478773..1479657 | - | 885 | WP_103808742.1 | hypothetical protein | - |
| IG623_RS06935 () | 1480104..1482770 | - | 2667 | WP_146052179.1 | hypothetical protein | - |
| IG623_RS06940 () | 1483278..1484492 | - | 1215 | WP_121247008.1 | tyrosine-type recombinase/integrase | - |
| IG623_RS06950 () | 1485179..1487632 | + | 2454 | WP_103808086.1 | mechanosensitive ion channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|