MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP062248 Location: 3261214..3282145 Organism: Escherichia coli strain AML002_ev02 Replicon: chromosome
Accession: NZ_CP062248 Location: 3261214..3282145 Organism: Escherichia coli strain AML002_ev02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHN47_RS15805 () | 3257046..3258377 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| IHN47_RS15810 () | 3258399..3259388 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IHN47_RS15815 () | 3259487..3260425 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IHN47_RS15820 () | 3260614..3260958 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| IHN47_RS15825 () | 3261214..3261753 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| IHN47_RS15830 () | 3261775..3262962 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| IHN47_RS15840 () | 3263985..3265130 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| IHN47_RS15845 () | 3265227..3266117 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IHN47_RS15850 () | 3266147..3266917 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IHN47_RS15855 () | 3266933..3268267 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IHN47_RS15860 () | 3268642..3270213 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| IHN47_RS15865 () | 3270362..3270697 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IHN47_RS15870 () | 3270697..3271161 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IHN47_RS15875 () | 3271216..3272025 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IHN47_RS15880 () | 3272274..3273554 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IHN47_RS15885 () | 3273577..3274050 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IHN47_RS15890 () | 3274061..3274432 | + | 372 | Protein_3103 | PTS sugar transporter subunit IIC | - |
| IHN47_RS15895 () | 3274428..3274985 | + | 558 | Protein_3104 | amidohydrolase family protein | - |
| IHN47_RS15900 () | 3275336..3276490 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| IHN47_RS15905 () | 3276503..3277363 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| IHN47_RS15910 () | 3277530..3278006 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IHN47_RS15915 () | 3278045..3278848 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| IHN47_RS15920 () | 3278838..3279629 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| IHN47_RS15925 () | 3279630..3280385 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| IHN47_RS15930 () | 3280786..3281370 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| IHN47_RS15935 () | 3281450..3282145 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| IHN47_RS15940 () | 3282174..3284690 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| IHN47_RS15945 () | 3284701..3285792 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| IHN47_RS15950 () | 3285835..3286695 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|