NZ_CP0622404563430..4572478

MGE detailed information

MGE type: Genomic_island        MGE length: 9049 bp
Accession: NZ_CP062240        Location: 4563430..4572478         Organism: Escherichia coli strain AML001_ev02       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IHN55_RS21985 () 4560014..4560934 + 921 Protein_4278 Rpn family recombination-promoting nuclease/putative transposase -
IHN55_RS21990 () 4561178..4562590 - 1413 WP_000199300.1 PLP-dependent aminotransferase family protein -
IHN55_RS21995 () 4562767..4562931 + 165 WP_000394280.1 DUF1127 domain-containing protein -
IHN55_RS22000 () 4563430..4564947 + 1518 WP_011443605.1 STY4851/ECs_5259 family protein -
IHN55_RS22005 () 4565151..4567871 + 2721 WP_014639049.1 hypothetical protein -
IHN55_RS22010 () 4567928..4568974 - 1047 WP_000437621.1 5-methylcytosine-specific restriction endonuclease system specificity protein McrC -
IHN55_RS22015 () 4568974..4570353 - 1380 WP_000443951.1 5-methylcytosine-specific restriction endonuclease subunit McrB -
IHN55_RS22020 () 4570515..4570856 - 342 WP_000132601.1 endoribonuclease SymE Toxin Detail
- () 4570851..4570927 + 77 NuclAT_14 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_14 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_14 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_14 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_15 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_15 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_15 - Antitoxin Detail
- () 4570851..4570927 + 77 NuclAT_15 - Antitoxin Detail
IHN55_RS22025 () 4571084..4572478 - 1395 WP_001272447.1 type I restriction-modification system specificity subunit -
IHN55_RS22030 () 4572475..4574064 - 1590 WP_001063204.1 type I restriction-modification system methyltransferase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20090 HG738867 4458009..4467057 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6352 NC_000913 4572414..4581462 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21461 NC_007779 4577094..4586142 0
Escherichia coli BW2952 Genomic island TA6351 NC_012759 4508921..4517969 0
Escherichia coli DH1 Genomic island TA27427 NC_017638 4552192..4561240 0
Escherichia coli BW25113 Genomic island TA48706 NZ_CP009273 4562231..4571279 0
Escherichia coli strain DH5alpha Genomic island TA90501 NZ_CP025520 3428612..3437660 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285035 NZ_HG738867 4458009..4467057 0