MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38377 bp
Accession: NZ_CP062157 Location: 1..38377 Organism: Pseudomonas lundensis strain 2T.2.5.2 Replicon: plasmid pPL-38ph
Accession: NZ_CP062157 Location: 1..38377 Organism: Pseudomonas lundensis strain 2T.2.5.2 Replicon: plasmid pPL-38ph
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF654_RS00005 () | 277..1248 | + | 972 | WP_143518354.1 | hypothetical protein | - |
| IF654_RS00010 () | 2068..2724 | + | 657 | WP_095008609.1 | AAA family ATPase | - |
| IF654_RS00015 () | 2788..3039 | + | 252 | WP_095008608.1 | hypothetical protein | - |
| IF654_RS00020 () | 3162..4697 | + | 1536 | WP_095008607.1 | hypothetical protein | - |
| IF654_RS00025 () | 4773..4955 | + | 183 | WP_095008565.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IF654_RS00030 () | 4988..5410 | + | 423 | WP_095008564.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IF654_RS00035 () | 5504..5692 | + | 189 | WP_095008563.1 | hypothetical protein | - |
| IF654_RS00040 () | 5863..6213 | + | 351 | WP_095008562.1 | hypothetical protein | - |
| IF654_RS00045 () | 6210..6404 | + | 195 | WP_095008561.1 | hypothetical protein | - |
| IF654_RS00050 () | 6454..6642 | + | 189 | WP_095008560.1 | hypothetical protein | - |
| IF654_RS00055 () | 6642..7055 | + | 414 | WP_095008559.1 | hypothetical protein | - |
| IF654_RS00060 () | 7548..8000 | - | 453 | WP_095008557.1 | hypothetical protein | - |
| IF654_RS00065 () | 8029..8289 | - | 261 | WP_095008556.1 | hypothetical protein | - |
| IF654_RS00070 () | 8369..9031 | - | 663 | WP_095008555.1 | S24 family peptidase | - |
| IF654_RS00075 () | 9222..9428 | + | 207 | WP_143518348.1 | hypothetical protein | - |
| IF654_RS00080 () | 9412..10005 | + | 594 | WP_095008553.1 | hypothetical protein | - |
| IF654_RS00085 () | 10028..10483 | + | 456 | WP_143518347.1 | hypothetical protein | - |
| IF654_RS00090 () | 10703..11116 | + | 414 | WP_095008551.1 | hypothetical protein | - |
| IF654_RS00095 () | 11113..11709 | + | 597 | WP_095008550.1 | Lar family restriction alleviation protein | - |
| IF654_RS00100 () | 11825..13117 | + | 1293 | WP_095008549.1 | site-specific integrase | - |
| IF654_RS00105 () | 13156..13614 | + | 459 | WP_095008548.1 | hypothetical protein | - |
| IF654_RS00110 () | 13843..14160 | + | 318 | WP_095008618.1 | phage holin, lambda family | - |
| IF654_RS00115 () | 14285..14656 | + | 372 | WP_095008547.1 | hypothetical protein | - |
| IF654_RS00120 () | 14714..15451 | + | 738 | WP_095008546.1 | hypothetical protein | - |
| IF654_RS00125 () | 15557..16111 | + | 555 | WP_095008545.1 | terminase small subunit | - |
| IF654_RS00130 () | 16095..18098 | + | 2004 | WP_095008544.1 | phage terminase large subunit family protein | - |
| IF654_RS00135 () | 18089..18304 | + | 216 | WP_095008543.1 | primosomal replication protein PriB/PriC domain protein | - |
| IF654_RS00140 () | 18310..19833 | + | 1524 | WP_047295267.1 | phage portal protein | - |
| IF654_RS00145 () | 19808..21820 | + | 2013 | WP_095008617.1 | Clp protease ClpP | - |
| IF654_RS00150 () | 21890..22204 | + | 315 | WP_095008542.1 | DUF2190 family protein | - |
| IF654_RS00155 () | 22204..22584 | + | 381 | WP_095008541.1 | hypothetical protein | - |
| IF654_RS00160 () | 22604..23089 | + | 486 | WP_047280281.1 | hypothetical protein | - |
| IF654_RS00165 () | 23086..23679 | + | 594 | WP_095008540.1 | phage baseplate assembly protein V | - |
| IF654_RS00170 () | 23758..23955 | + | 198 | WP_047280311.1 | hypothetical protein | - |
| IF654_RS00175 () | 23962..24288 | + | 327 | WP_047275405.1 | GPW/gp25 family protein | - |
| IF654_RS00180 () | 24285..25172 | + | 888 | WP_048374849.1 | baseplate J/gp47 family protein | - |
| IF654_RS00185 () | 25169..25771 | + | 603 | WP_047280278.1 | phage tail protein I | - |
| IF654_RS00190 () | 25768..26382 | + | 615 | Protein_37 | phage tail protein | - |
| IF654_RS00195 () | 27948..28562 | + | 615 | WP_095008539.1 | phage tail protein | - |
| IF654_RS00200 () | 28653..29825 | + | 1173 | WP_047280277.1 | phage tail sheath family protein | - |
| IF654_RS00205 () | 29838..30341 | + | 504 | WP_047280276.1 | phage major tail tube protein | - |
| IF654_RS00210 () | 30353..30661 | + | 309 | WP_095008538.1 | phage tail assembly protein | - |
| IF654_RS00215 () | 30810..33845 | + | 3036 | WP_194862067.1 | phage tail tape measure protein | - |
| IF654_RS00220 () | 33862..34707 | + | 846 | WP_095008616.1 | phage tail protein | - |
| IF654_RS00225 () | 34682..34888 | + | 207 | WP_047296895.1 | tail protein X | - |
| IF654_RS00230 () | 34965..36011 | + | 1047 | WP_095008615.1 | late control protein | - |
| IF654_RS00235 () | 36058..36603 | + | 546 | WP_095008614.1 | glycoside hydrolase family 19 protein | - |
| IF654_RS00240 () | 36600..37127 | + | 528 | WP_095008613.1 | lysis system i-spanin subunit Rz | - |
| IF654_RS00245 () | 37278..38072 | + | 795 | WP_095008612.1 | DNA adenine methylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|