MGE detailed information
MGE type: Conjugative plasmid MGE length: 172576 bp
Accession: NZ_CP061760 Location: 1..172576 Organism: Escherichia coli O68:H12 strain 97.3 Replicon: plasmid unnamed3
Accession: NZ_CP061760 Location: 1..172576 Organism: Escherichia coli O68:H12 strain 97.3 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEC98_RS24055 () | 1166..1383 | + | 218 | Protein_1 | hypothetical protein | - |
| IEC98_RS24060 () | 1387..1497 | + | 111 | Protein_2 | IS481 family transposase | - |
| IEC98_RS24065 () | 1769..2500 | + | 732 | WP_000850414.1 | complement resistance protein TraT | - |
| IEC98_RS24070 () | 2560..2931 | + | 372 | WP_052892432.1 | colicin | - |
| IEC98_RS24075 () | 3414..3761 | + | 348 | WP_000142427.1 | hypothetical protein | - |
| IEC98_RS24080 () | 3779..4369 | - | 591 | WP_052892431.1 | hypothetical protein | - |
| IEC98_RS24085 () | 4366..4614 | - | 249 | WP_052892430.1 | hypothetical protein | - |
| IEC98_RS24090 () | 5210..5428 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IEC98_RS24095 () | 5430..5735 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IEC98_RS24100 () | 5736..6542 | + | 807 | WP_000016966.1 | site-specific integrase | - |
| IEC98_RS24105 () | 6722..7366 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IEC98_RS24110 () | 7453..7761 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IEC98_RS24115 () | 8176..9156 | + | 981 | WP_000688508.1 | plasmid segregation protein ParM | - |
| IEC98_RS24120 () | 9149..9565 | + | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| IEC98_RS24125 () | 9567..9740 | - | 174 | Protein_15 | DUF4113 domain-containing protein | - |
| IEC98_RS24130 () | 9770..11362 | - | 1593 | WP_000080210.1 | IS66 family transposase ISEc47 | Transposase |
| IEC98_RS24135 () | 11393..11743 | - | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| IEC98_RS24140 () | 11740..12159 | - | 420 | WP_000422696.1 | IS66 family transposase ISEc23 | Transposase |
| IEC98_RS24145 () | 12664..13455 | - | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| IEC98_RS24150 () | 13474..15447 | - | 1974 | WP_024177478.1 | Hemin receptor | VF |
| IEC98_RS24155 () | 15944..16153 | + | 210 | Protein_21 | IS21 family transposase IS21 | Transposase |
| IEC98_RS24160 () | 16176..16841 | + | 666 | WP_000448923.1 | hypothetical protein | - |
| IEC98_RS24165 () | 17120..19000 | + | 1881 | WP_001283355.1 | colicin | - |
| IEC98_RS24170 () | 19018..19365 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| IEC98_RS24175 () | 19484..19831 | + | 348 | WP_000142449.1 | hypothetical protein | - |
| IEC98_RS24180 () | 19851..20441 | - | 591 | WP_000194580.1 | hypothetical protein | - |
| IEC98_RS24185 () | 20441..20692 | - | 252 | WP_031322317.1 | hypothetical protein | - |
| IEC98_RS24190 () | 21065..21367 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| IEC98_RS24195 () | 21364..21990 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| IEC98_RS24200 () | 22186..23363 | - | 1178 | Protein_30 | translesion error-prone DNA polymerase V subunit UmuC | - |
| IEC98_RS24205 () | 23772..24860 | - | 1089 | WP_001459672.1 | hypothetical protein | - |
| IEC98_RS24210 () | 25464..26445 | + | 982 | Protein_32 | IS5 family transposase IS5B | Transposase |
| IEC98_RS24215 () | 26593..27597 | + | 1005 | Protein_33 | DUF4935 domain-containing protein | - |
| IEC98_RS24220 () | 27599..28558 | + | 960 | WP_016243128.1 | bacteriophage abortive infection AbiH family protein | - |
| IEC98_RS24225 () | 28814..29254 | - | 441 | WP_011264070.1 | hypothetical protein | - |
| IEC98_RS24230 () | 29519..30499 | - | 981 | WP_032430896.1 | IS5 family transposase IS5D | Transposase |
| IEC98_RS24235 () | 30567..31277 | - | 711 | Protein_37 | site-specific integrase | - |
| IEC98_RS24240 () | 31378..31476 | - | 99 | Protein_38 | hypothetical protein | - |
| IEC98_RS24245 () | 31476..31913 | - | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IEC98_RS24250 () | 31910..32158 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| IEC98_RS24255 () | 32577..33479 | + | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| IEC98_RS24260 () | 33476..33788 | + | 313 | Protein_42 | hypothetical protein | - |
| IEC98_RS24265 () | 33865..34548 | + | 684 | WP_000086114.1 | DNA methylase | - |
| IEC98_RS24270 () | 34549..34770 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IEC98_RS24275 () | 34784..35218 | + | 435 | WP_000274419.1 | DUF1380 family protein | - |
| IEC98_RS24280 () | 35263..36033 | + | 771 | WP_001006218.1 | hypothetical protein | - |
| IEC98_RS24285 () | 36570..36872 | + | 303 | WP_077776154.1 | antirestriction protein | - |
| IEC98_RS24290 () | 36919..37338 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| IEC98_RS24295 () | 37338..37529 | + | 192 | WP_001027507.1 | hypothetical protein | - |
| IEC98_RS24300 () | 37492..37845 | + | 354 | WP_001367791.1 | hypothetical protein | - |
| IEC98_RS24305 () | 38282..38815 | + | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| IEC98_RS24310 () | 38873..39106 | + | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| IEC98_RS24315 () | 39166..41124 | + | 1959 | WP_000117306.1 | ParB/RepB/Spo0J family partition protein | - |
| IEC98_RS24320 () | 41179..41613 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| IEC98_RS24325 () | 41610..42329 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IEC98_RS24330 () | 42326..42922 | + | 597 | WP_000978008.1 | hypothetical protein | - |
| IEC98_RS24335 () | 43387..43887 | + | 501 | WP_000117617.1 | antirestriction protein ArdA | - |
| IEC98_RS24340 () | 44619..45053 | + | 435 | WP_000218847.1 | hypothetical protein | - |
| IEC98_RS24345 () | 45146..45412 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| IEC98_RS24350 () | 45477..46403 | + | 927 | WP_000038346.1 | Recombination-promoting nuclease RpnA | VF |
| IEC98_RS24355 () | 46403..46636 | + | 234 | WP_001370006.1 | hypothetical protein | - |
| IEC98_RS24360 () | 46667..46918 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| IEC98_RS24365 () | 47497..48345 | + | 849 | WP_001077013.1 | DUF4942 domain-containing protein | - |
| IEC98_RS24370 () | 48430..48765 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| IEC98_RS24375 () | 48997..49329 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| IEC98_RS24380 () | 49341..52052 | + | 2712 | WP_011310099.1 | Protein TraI | Relaxase |
| IEC98_RS24385 () | 52120..52551 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| IEC98_RS24390 () | 52649..52951 | - | 303 | WP_000334995.1 | hypothetical protein | - |
| IEC98_RS24395 () | 53077..55380 | - | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| IEC98_RS24400 () | 55361..56479 | - | 1119 | WP_011310097.1 | DsbC family protein | - |
| IEC98_RS24405 () | 56476..57747 | - | 1272 | WP_000121915.1 | IncI1-type conjugal transfer protein TrbA | - |
| IEC98_RS24410 () | 58191..58387 | + | 197 | Protein_72 | hypothetical protein | - |
| IEC98_RS24415 () | 58530..58841 | - | 312 | WP_000203481.1 | hypothetical protein | - |
| IEC98_RS24420 () | 58869..59060 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| IEC98_RS24425 () | 59070..59435 | - | 366 | WP_000997722.1 | hypothetical protein | - |
| IEC98_RS24430 () | 59942..64021 | - | 4080 | WP_136751174.1 | Serine protease SepA autotransporter | VF |
| IEC98_RS24435 () | 64468..64881 | - | 414 | WP_000598952.1 | thermonuclease family protein | - |
| IEC98_RS24440 () | 65040..65663 | + | 624 | WP_001158018.1 | hypothetical protein | - |
| IEC98_RS24445 () | 65751..66206 | + | 456 | WP_001205143.1 | DUF2569 family protein | - |
| IEC98_RS24450 () | 66407..67942 | + | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| IEC98_RS24455 () | 68035..68277 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| IEC98_RS24460 () | 68611..68763 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| IEC98_RS24465 () | 68901..70487 | - | 1587 | WP_000004566.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| IEC98_RS24470 () | 70761..71411 | - | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IEC98_RS24475 () | 71481..73646 | - | 2166 | WP_000691805.1 | DotA/TraY family protein | - |
| IEC98_RS24480 () | 73719..74288 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| IEC98_RS24485 () | 74285..75490 | - | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| IEC98_RS24490 () | 75451..76068 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| IEC98_RS24495 () | 76068..79112 | - | 3045 | WP_001024761.1 | hypothetical protein | - |
| IEC98_RS24500 () | 79287..79667 | - | 381 | WP_000690886.1 | hypothetical protein | - |
| IEC98_RS24505 () | 79667..80026 | - | 360 | WP_000380399.1 | hypothetical protein | - |
| IEC98_RS24510 () | 80081..80899 | - | 819 | WP_191115682.1 | conjugal transfer protein TraT | - |
| IEC98_RS24515 () | 80814..81065 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| IEC98_RS24520 () | 81122..81520 | - | 399 | WP_000086066.1 | hypothetical protein | - |
| IEC98_RS24525 () | 81567..82094 | - | 528 | WP_011310083.1 | conjugal transfer protein TraQ | - |
| IEC98_RS24530 () | 82094..82807 | - | 714 | WP_000787005.1 | conjugal transfer protein TraP | - |
| IEC98_RS24535 () | 82804..84135 | - | 1332 | WP_096696081.1 | conjugal transfer protein TraO | - |
| IEC98_RS24540 () | 84139..85113 | - | 975 | WP_001165562.1 | hypothetical protein | VF |
| IEC98_RS24545 () | 85124..85819 | - | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| IEC98_RS24550 () | 85831..86181 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| IEC98_RS24555 () | 86198..90214 | - | 4017 | WP_033811931.1 | DNA primase | - |
| IEC98_RS24560 () | 90278..90568 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| IEC98_RS24565 () | 90565..91713 | - | 1149 | WP_000625247.1 | putative protein YggR | VF |
| IEC98_RS24570 () | 91697..92533 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| IEC98_RS24575 () | 92530..92982 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| IEC98_RS24580 () | 93341..94542 | - | 1202 | Protein_106 | conjugal transfer protein TraF | - |
| IEC98_RS24585 () | 94632..95453 | - | 822 | WP_000804094.1 | hypothetical protein | - |
| IEC98_RS24590 () | 95713..96033 | + | 321 | WP_000695056.1 | hypothetical protein | - |
| IEC98_RS24595 () | 96125..96415 | - | 291 | WP_000681897.1 | hypothetical protein | - |
| IEC98_RS24600 () | 96873..98237 | - | 1365 | WP_001168071.1 | hypothetical protein | VF |
| IEC98_RS24605 () | 98242..98877 | - | 636 | WP_000478595.1 | prepilin peptidase | - |
| IEC98_RS24610 () | 98896..99369 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| IEC98_RS24615 () | 99423..99959 | - | 537 | WP_001011156.1 | cleavage protein | - |
| IEC98_RS24620 () | 100033..101133 | - | 1101 | WP_096696083.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IEC98_RS24625 () | 101135..102643 | - | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IEC98_RS24630 () | 102728..103180 | - | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| IEC98_RS24635 () | 103170..104465 | - | 1296 | WP_000129891.1 | type 4b pilus protein PilO2 | - |
| IEC98_RS24640 () | 104486..106105 | - | 1620 | WP_001034996.1 | Outer membrane lipoprotein BfpB | VF |
| IEC98_RS24645 () | 106136..106573 | - | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| IEC98_RS24650 () | 106578..107648 | - | 1071 | WP_001170190.1 | hypothetical protein | VF |
| IEC98_RS24655 () | 108257..108574 | - | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| IEC98_RS24660 () | 108580..110274 | - | 1695 | WP_000482662.1 | flotillin family protein | - |
| IEC98_RS24665 () | 110301..110921 | - | 621 | WP_000176499.1 | DUF1449 family protein | - |
| IEC98_RS24670 () | 111188..111853 | - | 666 | WP_000154144.1 | hypothetical protein | - |
| IEC98_RS24675 () | 111994..112635 | - | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| IEC98_RS24680 () | 113337..114368 | + | 1032 | WP_000907876.1 | hypothetical protein | - |
| IEC98_RS24685 () | 115065..115325 | + | 261 | WP_072094435.1 | hypothetical protein | - |
| IEC98_RS24690 () | 115338..115577 | + | 240 | WP_011310132.1 | MarR family transcriptional regulator | - |
| IEC98_RS24695 () | 116030..123496 | + | 7467 | Protein_129 | tRNA nuclease CdiA | VF |
| IEC98_RS24700 () | 124116..124376 | + | 261 | WP_000038919.1 | hypothetical protein | - |
| IEC98_RS24705 () | 124804..125223 | + | 420 | WP_000422695.1 | IS66 family transposase ISEc23 | Transposase |
| IEC98_RS24710 () | 125220..125570 | + | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| IEC98_RS24715 () | 125601..127193 | + | 1593 | WP_191115680.1 | IS66 family transposase ISEc47 | Transposase |
| IEC98_RS24720 () | 127231..127428 | + | 198 | Protein_134 | IS66 family transposase IS682 | Transposase |
| IEC98_RS24725 () | 127482..128525 | + | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| IEC98_RS24730 () | 128542..128967 | + | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| IEC98_RS24735 () | 129251..129439 | - | 189 | Protein_137 | IS66 family transposase ISEc47 | Transposase |
| IEC98_RS24740 () | 129501..129683 | + | 183 | Protein_138 | IS110 family transposase | - |
| IEC98_RS24745 () | 130018..130440 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| IEC98_RS24750 () | 130701..132788 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| IEC98_RS24755 () | 133096..133867 | - | 772 | Protein_141 | transposase | - |
| IEC98_RS24760 () | 133950..134099 | - | 150 | WP_000539306.1 | hypothetical protein | - |
| IEC98_RS24765 () | 134365..135747 | - | 1383 | WP_136830074.1 | autoagglutinating adhesin Saa | - |
| IEC98_RS24770 () | 136001..136090 | + | 90 | Protein_144 | transposase | - |
| IEC98_RS24775 () | 136157..137319 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IEC98_RS24780 () | 137377..137697 | + | 321 | WP_000220092.1 | hypothetical protein | - |
| IEC98_RS24785 () | 138187..138864 | - | 678 | WP_011310127.1 | hypothetical protein | - |
| IEC98_RS24790 () | 139023..139409 | + | 387 | WP_000598953.1 | thermonuclease family protein | - |
| IEC98_RS24795 () | 139906..143808 | + | 3903 | WP_060612763.1 | Serine protease EspP | VF |
| IEC98_RS24800 () | 143971..144180 | - | 210 | WP_062896385.1 | hypothetical protein | - |
| IEC98_RS24805 () | 144314..144678 | + | 365 | Protein_151 | hypothetical protein | - |
| IEC98_RS24810 () | 144688..144879 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| IEC98_RS24815 () | 144907..145218 | + | 312 | WP_000203483.1 | hypothetical protein | - |
| IEC98_RS24820 () | 145334..145798 | + | 465 | WP_077629759.1 | IS3 family transposase ISKpn8 | Transposase |
| IEC98_RS24825 () | 145866..146102 | + | 237 | WP_001369996.1 | hypothetical protein | - |
| IEC98_RS24830 () | 146143..146841 | - | 699 | WP_000431492.1 | lactate utilization protein C | - |
| IEC98_RS24835 () | 146846..148261 | - | 1416 | WP_191115681.1 | iron-sulfur cluster-binding protein | - |
| IEC98_RS24840 () | 148272..148991 | - | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| IEC98_RS24845 () | 149042..150598 | - | 1557 | WP_000554412.1 | L-lactate permease | - |
| IEC98_RS24850 () | 150963..151311 | - | 349 | Protein_160 | integrase core domain-containing protein | - |
| IEC98_RS24855 () | 151331..151960 | - | 630 | Protein_161 | transposase | - |
| IEC98_RS24860 () | 152065..153601 | - | 1537 | Protein_162 | IS3 family transposase | - |
| IEC98_RS24865 () | 153688..154122 | - | 435 | Protein_163 | IS110 family transposase ISEc21 | Transposase |
| IEC98_RS24870 () | 154452..154999 | - | 548 | Protein_164 | transposase | - |
| IEC98_RS24875 () | 155607..155891 | + | 285 | WP_000439678.1 | Major pilu subunit operon regulatory protein PapB | VF |
| IEC98_RS24880 () | 156106..160413 | + | 4308 | WP_060612721.1 | Autotransporter adhesin SadA | VF |
| IEC98_RS24885 () | 160438..161241 | + | 804 | WP_060612724.1 | Outer membrane protein A | VF |
| IEC98_RS24890 () | 161669..162184 | + | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| IEC98_RS24895 () | 162186..165182 | + | 2997 | WP_011310119.1 | Hemolysin, chromosomal | VF |
| IEC98_RS24900 () | 165232..167352 | + | 2121 | WP_072199949.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| IEC98_RS24905 () | 167356..168795 | + | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| IEC98_RS24910 () | 168916..169410 | + | 495 | WP_000377258.1 | Transcriptional repressor MprA | VF |
| IEC98_RS24915 () | 169540..169770 | + | 231 | WP_072127350.1 | serine/threonine protein kinase | - |
| IEC98_RS24920 () | 169927..171153 | + | 1227 | Protein_174 | ISL3 family transposase | - |
| IEC98_RS24925 () | 171207..171917 | + | 711 | Protein_175 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|