MGE detailed information
MGE type: Prophage MGE length: 61625 bp
Accession: NZ_CP061749 Location: 3941809..4003433 Organism: Escherichia coli O15:H12 strain 2273-PO3 Replicon: chromosome
Accession: NZ_CP061749 Location: 3941809..4003433 Organism: Escherichia coli O15:H12 strain 2273-PO3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IED00_RS19010 () | 3937787..3938938 | + | 1152 | WP_000323729.1 | trypsin-like peptidase domain-containing protein | - |
| IED00_RS19015 () | 3939163..3939732 | - | 570 | Protein_3751 | IS5 family transposase | - |
| IED00_RS19020 () | 3939728..3940422 | - | 695 | Protein_3752 | WYL domain-containing protein | - |
| IED00_RS19025 () | 3940854..3941717 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| IED00_RS19030 () | 3941809..3942630 | + | 822 | WP_000197388.1 | DUF945 domain-containing protein | - |
| IED00_RS19035 () | 3942847..3943548 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| IED00_RS19040 () | 3943589..3943825 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| IED00_RS19045 () | 3943825..3944268 | + | 444 | WP_001547764.1 | phage transcriptional regulator | - |
| IED00_RS19050 () | 3944291..3944758 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| IED00_RS19055 () | 3944835..3945074 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| IED00_RS19060 () | 3945172..3945630 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| IED00_RS19065 () | 3945646..3946122 | + | 477 | WP_000811693.1 | RadC family protein | - |
| IED00_RS19070 () | 3946131..3946352 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| IED00_RS19075 () | 3946371..3946688 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| IED00_RS19080 () | 3946709..3947050 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| IED00_RS19085 () | 3947649..3948008 | + | 360 | WP_097311094.1 | hypothetical protein | - |
| IED00_RS19090 () | 3948001..3948543 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| IED00_RS19095 () | 3949147..3949428 | - | 282 | WP_000617442.1 | PerC family transcriptional regulator | - |
| IED00_RS19100 () | 3949688..3950143 | + | 456 | WP_000230716.1 | hypothetical protein | - |
| IED00_RS19105 () | 3950223..3950444 | + | 222 | WP_001378274.1 | hypothetical protein | - |
| IED00_RS19110 () | 3950670..3950930 | - | 261 | WP_052601878.1 | hypothetical protein | - |
| IED00_RS19115 () | 3950996..3951694 | - | 699 | WP_000594596.1 | hypothetical protein | - |
| IED00_RS19120 () | 3951845..3954565 | - | 2721 | WP_000968280.1 | lytic transglycosylase domain-containing protein | - |
| IED00_RS19125 () | 3954562..3955881 | - | 1320 | WP_016247964.1 | phage DNA ejection protein | - |
| IED00_RS19130 () | 3955881..3956558 | - | 678 | WP_000909175.1 | hypothetical protein | - |
| IED00_RS19135 () | 3956552..3957013 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| IED00_RS19140 () | 3957030..3957191 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| IED00_RS19145 () | 3957586..3959121 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| IED00_RS19150 () | 3959171..3959518 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| IED00_RS19155 () | 3959515..3959898 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| IED00_RS19160 () | 3960221..3962977 | - | 2757 | WP_047668300.1 | TOPRIM and DUF927 domain-containing protein | - |
| IED00_RS19165 () | 3962964..3963335 | - | 372 | WP_001208878.1 | hypothetical protein | - |
| IED00_RS19170 () | 3963328..3963669 | - | 342 | WP_000628967.1 | hypothetical protein | - |
| IED00_RS19175 () | 3963680..3964282 | - | 603 | WP_032153477.1 | hypothetical protein | - |
| IED00_RS19180 () | 3964275..3964496 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| IED00_RS19185 () | 3964493..3964756 | - | 264 | WP_001024673.1 | hypothetical protein | - |
| IED00_RS19190 () | 3964753..3964947 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| IED00_RS19195 () | 3964940..3966007 | - | 1068 | WP_047668298.1 | ash family protein | - |
| IED00_RS19200 () | 3966004..3966183 | - | 180 | WP_000042976.1 | DUF4222 domain-containing protein | - |
| IED00_RS19205 () | 3966176..3967009 | - | 834 | WP_097311078.1 | antA/AntB antirepressor family protein | - |
| IED00_RS19210 () | 3967022..3967453 | - | 432 | WP_000412538.1 | hypothetical protein | - |
| IED00_RS19215 () | 3967453..3967656 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| IED00_RS19220 () | 3968048..3969262 | - | 1215 | WP_027661785.1 | Prophage integrase IntS ; Integrase | Integrase |
| IED00_RS19230 () | 3969618..3970871 | - | 1254 | WP_000893260.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IED00_RS19235 () | 3970883..3971986 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IED00_RS19240 () | 3972274..3973329 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| IED00_RS19245 () | 3973368..3973769 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| IED00_RS19250 () | 3973827..3975071 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3974487..3974567 | - | 81 | NuclAT_12 | - | - |
| - () | 3974487..3974567 | - | 81 | NuclAT_12 | - | - |
| - () | 3974487..3974567 | - | 81 | NuclAT_12 | - | - |
| - () | 3974487..3974567 | - | 81 | NuclAT_12 | - | - |
| IED00_RS19255 () | 3975163..3975621 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IED00_RS19260 () | 3975882..3977339 | + | 1458 | WP_001292997.1 | cytosol nonspecific dipeptidase | - |
| IED00_RS25700 () | 3977396..3977748 | - | 353 | Protein_3800 | peptide chain release factor H | - |
| IED00_RS19270 () | 3977744..3977950 | - | 207 | Protein_3801 | RtcB family protein | - |
| IED00_RS19275 () | 3978269..3978721 | - | 453 | WP_001059881.1 | GNAT family N-acetyltransferase | - |
| IED00_RS19280 () | 3978718..3979773 | - | 1056 | WP_001226182.1 | DNA polymerase IV | - |
| IED00_RS19285 () | 3979844..3980629 | - | 786 | WP_000207588.1 | Chemotaxis protein LafU | VF |
| IED00_RS19290 () | 3980601..3982313 | + | 1713 | Protein_3805 | Flagellar biosynthesis protein FlhA | VF |
| IED00_RS19295 () | 3982537..3983034 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| IED00_RS19300 () | 3983210..3983959 | - | 750 | WP_000093940.1 | Murein DD-endopeptidase MepH | VF |
| IED00_RS19305 () | 3984260..3985000 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IED00_RS19310 () | 3984971..3985738 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| IED00_RS19315 () | 3985944..3986522 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| IED00_RS19320 () | 3986762..3989206 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| IED00_RS19325 () | 3989249..3989695 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| IED00_RS19330 () | 3989876..3990646 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| IED00_RS19335 () | 3990788..3991485 | - | 698 | Protein_3814 | IS1 family transposase IS1X2 | Transposase |
| IED00_RS19340 () | 3991966..3993174 | + | 1209 | WP_016236915.1 | Prophage integrase IntA ; Integrase | Integrase |
| IED00_RS19345 () | 3993233..3993706 | + | 474 | WP_001614377.1 | hypothetical protein | - |
| IED00_RS19350 () | 3993758..3994476 | - | 719 | Protein_3817 | inovirus Gp2 family protein | - |
| IED00_RS19355 () | 3994412..3995109 | + | 698 | Protein_3818 | IS1 family transposase IS1X2 | Transposase |
| IED00_RS19360 () | 3995556..3997082 | - | 1527 | WP_001614374.1 | DUF3987 domain-containing protein | - |
| IED00_RS19365 () | 3997107..3997331 | - | 225 | WP_001614372.1 | AlpA family phage regulatory protein | - |
| IED00_RS19370 () | 3997435..3999282 | + | 1848 | WP_016236914.1 | hypothetical protein | - |
| IED00_RS19375 () | 4000059..4000241 | + | 183 | WP_023564427.1 | hypothetical protein | - |
| IED00_RS19380 () | 4000300..4000593 | - | 294 | Protein_3823 | hypothetical protein | - |
| IED00_RS19385 () | 4000662..4000907 | + | 246 | Protein_3824 | IS3 family transposase ISEc17 | Transposase |
| IED00_RS19390 () | 4000924..4001621 | - | 698 | Protein_3825 | IS1 family transposase IS1R | Transposase |
| IED00_RS19395 () | 4001677..4002171 | + | 495 | Protein_3826 | GIY-YIG nuclease family protein | - |
| IED00_RS19400 () | 4002453..4003433 | - | 981 | WP_079780838.1 | IS5 family transposase IS5D | Transposase |
| IED00_RS19405 () | 4003468..4003797 | + | 330 | WP_024196074.1 | acid-activated periplasmic chaperone HdeB | - |
| IED00_RS19410 () | 4003849..4004652 | - | 804 | WP_032669189.1 | aquaporin | - |
| IED00_RS19415 () | 4004706..4006529 | - | 1824 | WP_002917661.1 | diol dehydratase reactivase subunit alpha | - |
| IED00_RS19420 () | 4006542..4006967 | - | 426 | WP_002917670.1 | glycerol dehydratase small subunit DhaB3 | - |
| IED00_RS19425 () | 4006970..4007554 | - | 585 | WP_002917672.1 | propanediol/glycerol family dehydratase medium subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|