MGE detailed information
MGE type: Mobilizable plasmid MGE length: 85479 bp
Accession: NZ_CP061532 Location: 1..85479 Organism: Escherichia coli strain WEM25 Replicon: plasmid p2
Accession: NZ_CP061532 Location: 1..85479 Organism: Escherichia coli strain WEM25 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5V41_RS23250 () | 1..1011 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| H5V41_RS23255 () | 1728..2468 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| H5V41_RS23260 () | 3117..3383 | - | 267 | WP_024144810.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H5V41_RS23265 () | 3932..4629 | - | 698 | Protein_3 | IS1 family transposase IS1A | Transposase |
| H5V41_RS23270 () | 4746..5381 | - | 636 | WP_000677445.1 | hypothetical protein | VF |
| H5V41_RS23275 () | 5395..6390 | - | 996 | WP_190812258.1 | Fimbria adhesin protein | VF |
| H5V41_RS23280 () | 6381..8867 | - | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
| H5V41_RS23285 () | 8879..9580 | - | 702 | WP_004211921.1 | putative fimbrial chaperone YadV | VF |
| H5V41_RS23290 () | 9676..10284 | - | 609 | WP_002916128.1 | hypothetical protein | VF |
| H5V41_RS23295 () | 10452..11432 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| H5V41_RS23300 () | 11766..12463 | + | 698 | Protein_10 | IS1 family transposase IS1A | Transposase |
| H5V41_RS23305 () | 12460..12900 | + | 441 | WP_071997311.1 | EAL domain-containing protein | - |
| H5V41_RS23310 () | 13169..13603 | - | 435 | WP_001293129.1 | H-NS histone family protein | - |
| H5V41_RS23315 () | 13619..13825 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| H5V41_RS23320 () | 13822..15975 | - | 2154 | WP_031942376.1 | type IA DNA topoisomerase | - |
| H5V41_RS23325 () | 16111..17034 | + | 924 | Protein_15 | SMEK domain-containing protein | - |
| H5V41_RS23330 () | 17149..17451 | - | 303 | WP_000717624.1 | IncN plasmid KikA protein | - |
| H5V41_RS23335 () | 17448..17861 | - | 414 | WP_031942378.1 | conjugal transfer protein VirB | - |
| H5V41_RS23340 () | 17858..19693 | - | 1836 | WP_031942379.1 | type IV secretory system conjugative DNA transfer family protein | - |
| H5V41_RS23345 () | 19696..20727 | - | 1032 | WP_001058463.1 | Type IV secretion system protein VirB11 | VF |
| H5V41_RS23350 () | 20729..21934 | - | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| H5V41_RS23355 () | 21931..22860 | - | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| H5V41_RS23360 () | 22865..23578 | - | 714 | WP_000394613.1 | type IV secretion system protein | - |
| H5V41_RS23365 () | 23823..24884 | - | 1062 | WP_000796673.1 | hypothetical protein | VF |
| H5V41_RS23370 () | 24896..25180 | - | 285 | WP_000748128.1 | EexN family lipoprotein | - |
| H5V41_RS23375 () | 25195..25944 | - | 750 | WP_000744202.1 | pilus assembly protein | - |
| H5V41_RS23380 () | 25955..28708 | - | 2754 | WP_190812259.1 | Type IV secretion system protein virB4 | VF |
| H5V41_RS23385 () | 28727..29023 | - | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| H5V41_RS23390 () | 29001..29273 | - | 273 | WP_001436757.1 | hypothetical protein | - |
| H5V41_RS23395 () | 29345..30322 | + | 978 | WP_190812260.1 | IS5 family transposase ISKpn26 | Transposase |
| H5V41_RS23400 () | 30552..30701 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| H5V41_RS23405 () | 30771..30950 | - | 180 | WP_000439078.1 | hypothetical protein | - |
| H5V41_RS23410 () | 30993..31322 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| H5V41_RS23415 () | 31415..31630 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| H5V41_RS23420 () | 31620..31865 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| H5V41_RS23425 () | 31911..32234 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| H5V41_RS23430 () | 32380..32661 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H5V41_RS23435 () | 32651..32902 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| H5V41_RS23440 () | 34136..34972 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| H5V41_RS23445 () | 35012..35458 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| H5V41_RS23450 () | 35526..35948 | + | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| H5V41_RS23455 () | 36008..36976 | - | 969 | WP_176705453.1 | IS5 family transposase IS903B | Transposase |
| H5V41_RS23460 () | 37010..37207 | + | 198 | Protein_42 | hypothetical protein | VF |
| H5V41_RS23465 () | 37242..37876 | - | 635 | Protein_43 | hypothetical protein | VF |
| H5V41_RS23470 () | 37890..38883 | - | 994 | Protein_44 | Fimbria adhesin protein | VF |
| H5V41_RS23475 () | 38874..41357 | - | 2484 | Protein_45 | Outer membrane usher protein HtrE | VF |
| H5V41_RS23480 () | 41369..42061 | - | 693 | WP_190812261.1 | Chaperone protein FimC | VF |
| H5V41_RS23485 () | 42111..42808 | + | 698 | Protein_47 | IS1 family transposase IS1R | Transposase |
| H5V41_RS23490 () | 42928..43173 | - | 246 | Protein_48 | IS1 family transposase | - |
| H5V41_RS23495 () | 43233..43733 | - | 501 | Protein_49 | IS110 family transposase ISCps4 | Transposase |
| H5V41_RS23500 () | 44167..45171 | - | 1005 | WP_000851062.1 | LacI family DNA-binding transcriptional regulator | - |
| H5V41_RS23505 () | 45201..46601 | - | 1401 | WP_000056853.1 | sucrose-6-phosphate hydrolase | - |
| H5V41_RS23510 () | 46601..47971 | - | 1371 | WP_000345203.1 | sucrose-specific PTS transporter subunit IIBC | - |
| H5V41_RS23515 () | 48107..49624 | - | 1518 | WP_032488482.1 | carbohydrate porin | - |
| H5V41_RS23520 () | 49790..50713 | - | 924 | WP_000992321.1 | aminoimidazole riboside kinase | - |
| H5V41_RS23525 () | 51068..51316 | + | 249 | Protein_55 | IS3 family transposase ISEhe3 | Transposase |
| H5V41_RS23530 () | 51326..51850 | - | 525 | Protein_56 | IS30 family transposase IS30D | Transposase |
| H5V41_RS23535 () | 51916..52197 | + | 282 | Protein_57 | IS6 family transposase IS15DII | Transposase |
| H5V41_RS23540 () | 52197..52382 | - | 186 | Protein_58 | Tn3 family transposase | - |
| H5V41_RS23545 () | 52639..53916 | - | 1278 | WP_190812254.1 | DUF2254 domain-containing protein | - |
| H5V41_RS23550 () | 53980..55977 | - | 1998 | WP_008502232.1 | choline BCCT transporter BetT | - |
| H5V41_RS23555 () | 56187..57167 | - | 981 | WP_190812255.1 | IS5 family transposase ISKpn26 | Transposase |
| H5V41_RS23560 () | 57445..57726 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| H5V41_RS23565 () | 57707..58036 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H5V41_RS23570 () | 59199..59903 | + | 705 | WP_190812256.1 | IS6 family transposase IS26 | Transposase |
| H5V41_RS23575 () | 59952..61571 | + | 1620 | Protein_65 | Tn3 family transposase ISEc63 | Transposase |
| H5V41_RS23580 () | 61795..62277 | - | 483 | WP_072222379.1 | hypothetical protein | - |
| H5V41_RS23585 () | 62284..63285 | - | 1002 | Protein_67 | DUF262 domain-containing protein | - |
| H5V41_RS23590 () | 63351..64330 | + | 980 | Protein_68 | IS5 family transposase ISKpn26 | Transposase |
| H5V41_RS23595 () | 64479..64766 | - | 288 | Protein_69 | DUF262 domain-containing protein | - |
| H5V41_RS23600 () | 65050..65451 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H5V41_RS23605 () | 65384..65641 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H5V41_RS23610 () | 65734..66387 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H5V41_RS23615 () | 67338..68042 | - | 705 | WP_190812256.1 | IS6 family transposase IS26 | Transposase |
| H5V41_RS23620 () | 68019..68309 | + | 291 | WP_165469589.1 | RepB family plasmid replication initiator protein | - |
| H5V41_RS23625 () | 68550..69234 | - | 685 | Protein_75 | IS1 family transposase | - |
| H5V41_RS23630 () | 69503..70258 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| H5V41_RS23635 () | 70792..71375 | + | 584 | Protein_77 | IS1 family transposase | - |
| H5V41_RS23640 () | 71386..71577 | - | 192 | WP_000861580.1 | hypothetical protein | - |
| H5V41_RS23645 () | 71586..71972 | - | 387 | WP_001039463.1 | hypothetical protein | - |
| H5V41_RS23650 () | 72506..72880 | + | 375 | WP_016243903.1 | hypothetical protein | - |
| H5V41_RS23655 () | 72924..73079 | + | 156 | WP_016243904.1 | hypothetical protein | - |
| H5V41_RS23660 () | 73130..73815 | + | 686 | Protein_82 | IS1 family transposase | - |
| H5V41_RS23665 () | 73831..74133 | + | 303 | Protein_83 | replication initiation protein | - |
| H5V41_RS23670 () | 74961..75644 | - | 684 | Protein_84 | IS1 family transposase | - |
| H5V41_RS23675 () | 75796..77283 | - | 1488 | WP_024191381.1 | group II intron reverse transcriptase/maturase | - |
| H5V41_RS23680 () | 77688..78908 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| H5V41_RS23685 () | 79008..79433 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H5V41_RS23690 () | 79433..80704 | + | 1272 | WP_190812257.1 | Y-family DNA polymerase | - |
| H5V41_RS23695 () | 80783..81034 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| H5V41_RS23700 () | 81088..81393 | + | 306 | WP_016156495.1 | hypothetical protein | - |
| H5V41_RS23705 () | 82591..83562 | - | 972 | WP_016243880.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H5V41_RS23710 () | 83562..84728 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|