MGE detailed information
MGE type: Prophage MGE length: 37020 bp
Accession: NZ_CP061530 Location: 2146263..2183282 Organism: Escherichia coli strain WEM25 Replicon: chromosome
Accession: NZ_CP061530 Location: 2146263..2183282 Organism: Escherichia coli strain WEM25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5V41_RS10370 () | 2142778..2143524 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| H5V41_RS10375 () | 2143613..2144299 | + | 687 | WP_190812211.1 | DNA-binding transcriptional regulator YdfH | - |
| H5V41_RS10380 () | 2144476..2144679 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H5V41_RS10385 () | 2144714..2146174 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H5V41_RS10390 () | 2146263..2147546 | - | 1284 | Protein_2023 | MHS family MFS transporter YdfJ | - |
| H5V41_RS10395 () | 2148149..2148262 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| H5V41_RS10400 () | 2148331..2148564 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H5V41_RS10405 () | 2148881..2149192 | + | 312 | Protein_2026 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H5V41_RS10410 () | 2149349..2150303 | - | 955 | Protein_2027 | IS5 family transposase IS5B | Transposase |
| H5V41_RS10415 () | 2150714..2151211 | - | 498 | WP_001071778.1 | DUF2514 domain-containing protein | - |
| H5V41_RS10420 () | 2151208..2151741 | - | 534 | WP_001101173.1 | lysozyme | - |
| H5V41_RS10425 () | 2151855..2152115 | + | 261 | WP_001557934.1 | hypothetical protein | - |
| H5V41_RS10430 () | 2152063..2152614 | - | 552 | WP_000189900.1 | YdfR family protein | - |
| H5V41_RS10435 () | 2152619..2152834 | - | 216 | WP_190812212.1 | class II holin family protein | - |
| H5V41_RS10440 () | 2153025..2153738 | - | 714 | WP_190812213.1 | helix-turn-helix domain-containing protein | - |
| H5V41_RS10445 () | 2154145..2155104 | - | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| H5V41_RS10450 () | 2155297..2155821 | + | 525 | WP_000780584.1 | lipocalin family protein | - |
| H5V41_RS10455 () | 2155977..2156354 | - | 378 | WP_001204787.1 | antitermination protein | - |
| H5V41_RS10460 () | 2156372..2157421 | - | 1050 | WP_190812214.1 | DUF968 domain-containing protein | - |
| H5V41_RS10465 () | 2157423..2157701 | - | 279 | WP_001515373.1 | hypothetical protein | - |
| H5V41_RS10470 () | 2157768..2158019 | - | 252 | WP_001463433.1 | hypothetical protein | - |
| H5V41_RS10475 () | 2158236..2158391 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H5V41_RS10480 () | 2158463..2158750 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H5V41_RS10485 () | 2158750..2158989 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H5V41_RS10490 () | 2159014..2159319 | + | 306 | WP_071593935.1 | hypothetical protein | - |
| H5V41_RS10495 () | 2159522..2159854 | + | 333 | WP_001301033.1 | protein FlxA | - |
| H5V41_RS10500 () | 2160291..2161631 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| H5V41_RS10505 () | 2162170..2163332 | + | 1163 | WP_126323058.1 | IS3 family transposase IS3 | Transposase |
| H5V41_RS10510 () | 2163526..2163774 | + | 249 | Protein_2047 | IS3 family transposase ISEhe3 | Transposase |
| H5V41_RS10515 () | 2163784..2164935 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| H5V41_RS10520 () | 2165000..2165896 | + | 897 | Protein_2049 | IS3 family transposase ISEhe3 | Transposase |
| H5V41_RS10525 () | 2165915..2167129 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H5V41_RS10530 () | 2167335..2167661 | - | 327 | WP_001383202.1 | YnfA family protein | - |
| H5V41_RS10535 () | 2167796..2168137 | + | 342 | WP_190812215.1 | DUF1283 family protein | - |
| H5V41_RS10540 () | 2168172..2168732 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H5V41_RS10545 () | 2168735..2169445 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H5V41_RS10550 () | 2169553..2169858 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H5V41_RS10555 () | 2170057..2171535 | + | 1479 | WP_016245341.1 | molybdopterin-dependent oxidoreductase | - |
| H5V41_RS10560 () | 2172200..2173189 | - | 990 | WP_165471649.1 | hypothetical protein | - |
| H5V41_RS10565 () | 2173271..2173762 | - | 492 | WP_165471643.1 | hypothetical protein | - |
| H5V41_RS10570 () | 2174194..2174934 | - | 741 | WP_000178825.1 | KilA-N domain-containing protein | - |
| H5V41_RS10575 () | 2174936..2175325 | - | 390 | WP_000153249.1 | hypothetical protein | - |
| H5V41_RS10580 () | 2175736..2176104 | - | 369 | WP_032671097.1 | hypothetical protein | - |
| H5V41_RS10585 () | 2176598..2178223 | - | 1626 | WP_165471642.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H5V41_RS10590 () | 2178206..2179315 | + | 1110 | WP_074577550.1 | molybdopterin-dependent oxidoreductase | - |
| H5V41_RS10595 () | 2179376..2181799 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| H5V41_RS10600 () | 2181810..2182426 | + | 617 | Protein_2065 | dimethylsulfoxide reductase subunit B | - |
| H5V41_RS10605 () | 2182428..2183282 | + | 855 | WP_190812216.1 | dimethyl sulfoxide reductase anchor subunit | - |
| H5V41_RS10610 () | 2183325..2183939 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| H5V41_RS10615 () | 2184098..2185390 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| H5V41_RS10620 () | 2185343..2186038 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| H5V41_RS10625 () | 2186163..2187383 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|