MGE detailed information
MGE type: Prophage MGE length: 28518 bp
Accession: NZ_CP061530 Location: 1921962..1950479 Organism: Escherichia coli strain WEM25 Replicon: chromosome
Accession: NZ_CP061530 Location: 1921962..1950479 Organism: Escherichia coli strain WEM25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5V41_RS09330 () | 1918012..1918995 | + | 984 | WP_024238020.1 | zinc transporter ZntB | - |
| H5V41_RS09335 () | 1919473..1920846 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| H5V41_RS09340 () | 1920975..1921910 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| H5V41_RS09345 () | 1921962..1923197 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| H5V41_RS09350 () | 1923199..1923414 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| H5V41_RS09355 () | 1923493..1923702 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1923518..1923696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1923518..1923696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1923518..1923696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1923518..1923696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| H5V41_RS09360 () | 1923695..1923889 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| H5V41_RS09365 () | 1923946..1924755 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| H5V41_RS09370 () | 1924748..1927348 | - | 2601 | WP_190812194.1 | exodeoxyribonuclease VIII | - |
| H5V41_RS09375 () | 1927450..1927725 | - | 276 | WP_000632297.1 | protein RacC | - |
| H5V41_RS09380 () | 1927800..1927970 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| H5V41_RS09385 () | 1927970..1928191 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| H5V41_RS09390 () | 1928676..1929373 | - | 698 | Protein_1823 | IS1 family transposase IS1A | Transposase |
| H5V41_RS09395 () | 1929423..1929677 | + | 255 | WP_190812231.1 | superinfection exclusion B family protein | - |
| H5V41_RS09400 () | 1929674..1929829 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| H5V41_RS09405 () | 1930262..1930681 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| H5V41_RS09410 () | 1930761..1931015 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| H5V41_RS09415 () | 1931012..1931434 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| H5V41_RS09420 () | 1931512..1932300 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| H5V41_RS09425 () | 1932307..1933053 | + | 747 | WP_000788969.1 | ATP-binding protein | - |
| H5V41_RS09430 () | 1933076..1933837 | + | 762 | WP_024250660.1 | DUF1627 domain-containing protein | - |
| H5V41_RS09435 () | 1933853..1934275 | + | 423 | WP_001151249.1 | DUF977 family protein | - |
| H5V41_RS09445 () | 1936000..1937367 | + | 1368 | WP_001703208.1 | hypothetical protein | - |
| H5V41_RS09450 () | 1938038..1938376 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| H5V41_RS09455 () | 1939189..1939788 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| H5V41_RS09460 () | 1939788..1940078 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| H5V41_RS09465 () | 1940075..1940617 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| H5V41_RS09470 () | 1941662..1942090 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| H5V41_RS09475 () | 1942262..1942636 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| H5V41_RS09480 () | 1942888..1943103 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| H5V41_RS09485 () | 1943103..1943600 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| H5V41_RS09490 () | 1943817..1944002 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| H5V41_RS09495 () | 1944199..1945656 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| H5V41_RS09500 () | 1945794..1946585 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| H5V41_RS09505 () | 1946578..1947510 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| H5V41_RS09510 () | 1947446..1947685 | + | 240 | WP_190812195.1 | hypothetical protein | - |
| H5V41_RS09515 () | 1947714..1948411 | + | 698 | Protein_1848 | IS1 family transposase IS1A | Transposase |
| H5V41_RS09520 () | 1948404..1948724 | + | 321 | WP_190812232.1 | phage tail protein | - |
| H5V41_RS09525 () | 1948728..1949255 | + | 528 | WP_033561207.1 | tail fiber assembly protein | - |
| H5V41_RS09530 () | 1949284..1949817 | - | 534 | WP_190812196.1 | tail fiber assembly protein | - |
| H5V41_RS09535 () | 1949820..1950815 | - | 996 | Protein_1852 | phage tail protein | - |
| H5V41_RS09540 () | 1950845..1951039 | + | 195 | WP_001421134.1 | recombinase family protein | - |
| H5V41_RS09545 () | 1951073..1951171 | + | 99 | Protein_1854 | tail fiber assembly protein | - |
| H5V41_RS09550 () | 1951722..1952156 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| H5V41_RS09555 () | 1952297..1953430 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|