MGE detailed information
MGE type: Prophage MGE length: 51009 bp
Accession: NZ_CP061527 Location: 3357918..3408926 Organism: Shigella dysenteriae strain HNCMB 20080 Replicon: chromosome
Accession: NZ_CP061527 Location: 3357918..3408926 Organism: Shigella dysenteriae strain HNCMB 20080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC625_RS17910 () | 3353532..3356504 | + | 2973 | Protein_3500 | bacteriophage adsorption protein NfrA | - |
| IC625_RS17915 () | 3356505..3357395 | + | 891 | Protein_3501 | DUF4434 family protein | - |
| IC625_RS17920 () | 3357578..3357904 | + | 327 | Protein_3502 | DNA-binding transcriptional regulator EnvY | - |
| IC625_RS17930 () | 3358670..3358909 | + | 240 | Protein_3504 | DNA-binding transcriptional regulator EnvY | - |
| IC625_RS17935 () | 3358967..3359661 | + | 695 | WP_087786203.1 | IS1 family transposase IS1N | Transposase |
| IC625_RS17940 () | 3359675..3359887 | + | 213 | Protein_3506 | helix-turn-helix transcriptional regulator | - |
| IC625_RS17950 () | 3360176..3360873 | - | 698 | Protein_3507 | IS1 family transposase | - |
| IC625_RS17955 () | 3360928..3361272 | - | 345 | Protein_3508 | hypothetical protein | VF |
| IC625_RS17965 () | 3362254..3362571 | - | 318 | Protein_3510 | transposase | - |
| IC625_RS17970 () | 3362747..3363496 | - | 750 | WP_011378552.1 | hypothetical protein | VF |
| IC625_RS17975 () | 3363706..3363966 | + | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| IC625_RS17980 () | 3363969..3364247 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| IC625_RS17985 () | 3364403..3365143 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IC625_RS17990 () | 3365114..3365881 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| IC625_RS17995 () | 3366087..3366665 | - | 579 | WP_005020694.1 | hypothetical protein | VF |
| IC625_RS18000 () | 3366905..3369349 | + | 2445 | Protein_3517 | hypothetical protein | VF |
| IC625_RS18005 () | 3369392..3369865 | - | 474 | WP_000533149.1 | Ivy family C-type lysozyme inhibitor | - |
| IC625_RS18010 () | 3370019..3370789 | + | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| IC625_RS18015 () | 3370953..3372161 | - | 1209 | Protein_3520 | IS256 family transposase ISEc39 | Transposase |
| IC625_RS18025 () | 3372931..3373215 | + | 285 | Protein_3522 | type VI secretion system tube protein Hcp | - |
| IC625_RS18030 () | 3373236..3373388 | + | 153 | WP_001414527.1 | hypothetical protein | - |
| IC625_RS18035 () | 3373404..3374015 | + | 612 | Protein_3524 | peptidoglycan-binding protein LysM | - |
| IC625_RS18040 () | 3374071..3374764 | + | 694 | Protein_3525 | IS1 family transposase | - |
| IC625_RS18045 () | 3374780..3374905 | + | 126 | Protein_3526 | peptidoglycan-binding protein | - |
| IC625_RS18050 () | 3374908..3375162 | + | 255 | WP_005020710.1 | hypothetical protein | - |
| IC625_RS18055 () | 3375213..3375910 | + | 698 | Protein_3528 | IS1 family transposase | - |
| IC625_RS18065 () | 3376351..3377082 | - | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| IC625_RS18070 () | 3377147..3377614 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| IC625_RS18075 () | 3377611..3378333 | - | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| IC625_RS18080 () | 3378367..3379122 | + | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| IC625_RS18085 () | 3379194..3380552 | + | 1359 | WP_000644696.1 | hypothetical protein | VF |
| IC625_RS18090 () | 3380600..3381354 | - | 755 | Protein_3534 | class I SAM-dependent methyltransferase | - |
| IC625_RS18095 () | 3381432..3382232 | - | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| IC625_RS18100 () | 3382473..3383387 | + | 915 | WP_000648592.1 | hypothetical protein | VF |
| IC625_RS18105 () | 3383384..3384186 | - | 803 | Protein_3537 | 2,5-didehydrogluconate reductase DkgB | - |
| IC625_RS18140 () | 3389938..3390510 | - | 573 | WP_001140169.1 | hypothetical protein | VF |
| IC625_RS18145 () | 3390698..3391729 | + | 1032 | WP_000594003.1 | hypothetical protein | VF |
| IC625_RS18150 () | 3391722..3392375 | + | 654 | WP_001294603.1 | methionine ABC transporter permease MetI | - |
| IC625_RS18155 () | 3392415..3393230 | + | 816 | WP_000874233.1 | hypothetical protein | VF |
| IC625_RS18160 () | 3393348..3393752 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| IC625_RS18165 () | 3393749..3394456 | + | 708 | WP_000094004.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| IC625_RS18170 () | 3394567..3396285 | + | 1719 | WP_001260719.1 | proline--tRNA ligase | - |
| IC625_RS18175 () | 3396338..3397162 | + | 825 | WP_005020738.1 | YaeF family permuted papain-like enzyme | - |
| IC625_RS18180 () | 3397306..3398016 | - | 711 | WP_000239185.1 | envelope stress response activation lipoprotein NlpE | - |
| IC625_RS18185 () | 3398030..3398452 | - | 423 | WP_000635559.1 | aminoacyl-tRNA hydrolase | - |
| IC625_RS18190 () | 3398449..3398994 | - | 546 | WP_001185307.1 | YaeQ family protein | - |
| IC625_RS18195 () | 3399160..3399360 | + | 201 | WP_000417058.1 | YaeP family protein | - |
| IC625_RS18200 () | 3399347..3399607 | + | 261 | WP_000062312.1 | Rho-binding antiterminator | - |
| IC625_RS18205 () | 3399660..3400955 | - | 1296 | WP_000176586.1 | tRNA lysidine(34) synthetase TilS | - |
| IC625_RS18210 () | 3401023..3401412 | - | 390 | WP_038814217.1 | VOC family protein | - |
| IC625_RS18215 () | 3401455..3403447 | - | 1993 | Protein_3553 | lysine decarboxylase LdcC | - |
| IC625_RS18220 () | 3403463..3404160 | - | 698 | Protein_3554 | IS1 family transposase | - |
| IC625_RS18225 () | 3404194..3404373 | - | 180 | WP_001021035.1 | hypothetical protein | - |
| IC625_RS18230 () | 3404472..3405431 | - | 960 | WP_000055741.1 | acetyl-CoA carboxylase carboxyl transferase subunit alpha | - |
| IC625_RS18235 () | 3405444..3408926 | - | 3483 | WP_001294745.1 | DNA polymerase III subunit alpha | - |
| IC625_RS18240 () | 3408963..3409559 | - | 597 | WP_000569431.1 | ribonuclease HII | - |
| IC625_RS18245 () | 3409556..3410704 | - | 1149 | WP_000139657.1 | lipid-A-disaccharide synthase | - |
| IC625_RS18250 () | 3410704..3411492 | - | 789 | WP_000565966.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| IC625_RS18255 () | 3411496..3411951 | - | 456 | WP_000210739.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| IC625_RS18260 () | 3412056..3413081 | - | 1026 | WP_001139279.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| IC625_RS18265 () | 3413085..3413570 | - | 486 | WP_000758956.1 | molecular chaperone Skp | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|