MGE detailed information
MGE type: Prophage MGE length: 20457 bp
Accession: NZ_CP061527 Location: 1381759..1402215 Organism: Shigella dysenteriae strain HNCMB 20080 Replicon: chromosome
Accession: NZ_CP061527 Location: 1381759..1402215 Organism: Shigella dysenteriae strain HNCMB 20080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC625_RS07200 () | 1376997..1380749 | + | 3753 | Protein_1396 | AIDA-I family autotransporter adhesin YfaL/EhaC | - |
| IC625_RS07205 () | 1380890..1381612 | - | 723 | WP_000990765.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| IC625_RS07210 () | 1381759..1384386 | + | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| IC625_RS07215 () | 1384535..1384630 | + | 96 | Protein_1399 | DUF2138 domain-containing protein | - |
| IC625_RS07220 () | 1384622..1384963 | + | 342 | Protein_1400 | DUF2138 family protein | - |
| IC625_RS07225 () | 1384960..1385520 | + | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| IC625_RS07230 () | 1385578..1386582 | - | 1005 | Protein_1402 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IC625_RS07235 () | 1386716..1387947 | + | 1232 | WP_134806060.1 | IS3 family transposase ISSd1 | Transposase |
| IC625_RS07240 () | 1388000..1388410 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| IC625_RS07245 () | 1388407..1388628 | + | 222 | WP_001254231.1 | NinE family protein | - |
| IC625_RS07250 () | 1388625..1388933 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| IC625_RS07255 () | 1388923..1389252 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IC625_RS07260 () | 1389573..1390250 | + | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| IC625_RS07265 () | 1390325..1391047 | + | 723 | WP_001004003.1 | DNA-binding protein | - |
| IC625_RS07270 () | 1391085..1391225 | + | 141 | Protein_1410 | HNH endonuclease | - |
| IC625_RS07275 () | 1391282..1391976 | + | 695 | WP_134801589.1 | IS1 family transposase IS1N | Transposase |
| IC625_RS07280 () | 1391992..1392312 | - | 321 | Protein_1412 | hypothetical protein | VF |
| IC625_RS07285 () | 1392603..1393271 | - | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| IC625_RS07290 () | 1393271..1393987 | - | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| IC625_RS07295 () | 1393994..1394725 | - | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| IC625_RS07300 () | 1394743..1395471 | - | 729 | WP_000027205.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| IC625_RS07305 () | 1395689..1396206 | - | 518 | Protein_1417 | lipoprotein | - |
| IC625_RS07315 () | 1397628..1398389 | + | 762 | Protein_1419 | pentapeptide repeat-containing protein | - |
| IC625_RS07320 () | 1398447..1399141 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| IC625_RS07325 () | 1399157..1399678 | + | 522 | Protein_1421 | pentapeptide repeat-containing protein | - |
| IC625_RS07330 () | 1399694..1400391 | - | 698 | Protein_1422 | IS1 family transposase | - |
| IC625_RS07335 () | 1400447..1400854 | + | 408 | Protein_1423 | pentapeptide repeat-containing protein | - |
| IC625_RS07340 () | 1401065..1401388 | + | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| IC625_RS07345 () | 1401385..1402215 | + | 831 | WP_134802075.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| IC625_RS07350 () | 1402212..1403225 | - | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| IC625_RS07355 () | 1403324..1404754 | - | 1431 | WP_001136565.1 | SDR family oxidoreductase | - |
| IC625_RS07360 () | 1404765..1405766 | - | 1002 | WP_000566392.1 | low-specificity L-threonine aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|