MGE detailed information
MGE type: Conjugative plasmid MGE length: 162789 bp
Accession: NZ_CP061405 Location: 1..162789 Organism: Klebsiella pneumoniae strain NU-CRE055 Replicon: plasmid pCRE-055-1
Accession: NZ_CP061405 Location: 1..162789 Organism: Klebsiella pneumoniae strain NU-CRE055 Replicon: plasmid pCRE-055-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCV81_RS26890 () | 881..1096 | - | 216 | Protein_1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HCV81_RS26895 () | 1175..2446 | - | 1272 | WP_004152715.1 | Y-family DNA polymerase | - |
| HCV81_RS26900 () | 2446..2871 | - | 426 | WP_004178083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HCV81_RS26905 () | 3274..4761 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| HCV81_RS26910 () | 4995..5225 | + | 231 | WP_004152753.1 | hypothetical protein | - |
| HCV81_RS26915 () | 5746..6171 | + | 426 | WP_004118478.1 | antirestriction protein | - |
| HCV81_RS26920 () | 6408..6662 | + | 255 | WP_004152754.1 | DNA polymerase III subunit theta | - |
| HCV81_RS26925 () | 6697..7014 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| HCV81_RS26930 () | 7796..8023 | + | 228 | WP_004178072.1 | hypothetical protein | - |
| HCV81_RS26935 () | 8115..8345 | + | 231 | WP_004198570.1 | hypothetical protein | - |
| HCV81_RS26940 () | 8397..9752 | + | 1356 | WP_004178068.1 | DUF3560 domain-containing protein | - |
| HCV81_RS26945 () | 9800..10363 | + | 564 | WP_004152645.1 | methyltransferase | - |
| HCV81_RS26950 () | 11139..11681 | + | 543 | WP_004152644.1 | single-stranded DNA-binding protein | - |
| HCV81_RS26955 () | 11730..11978 | + | 249 | WP_004152643.1 | DUF905 domain-containing protein | - |
| HCV81_RS26960 () | 12048..14084 | + | 2037 | WP_004178066.1 | ParB/RepB/Spo0J family partition protein | - |
| HCV81_RS26965 () | 14151..14582 | + | 432 | WP_004152641.1 | conjugation system SOS inhibitor PsiB | - |
| HCV81_RS26970 () | 14579..15307 | + | 729 | WP_004152640.1 | plasmid SOS inhibition protein A | - |
| HCV81_RS26975 () | 15304..15630 | + | 327 | WP_004152639.1 | hypothetical protein | - |
| HCV81_RS26980 () | 15686..16060 | + | 375 | WP_004152638.1 | hypothetical protein | - |
| HCV81_RS26985 () | 16234..17300 | - | 1067 | Protein_20 | IS481 family transposase ISKpn28 | Transposase |
| HCV81_RS26990 () | 17372..17533 | + | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| HCV81_RS26995 () | 18229..18501 | + | 273 | WP_004182067.1 | hypothetical protein | - |
| HCV81_RS27000 () | 18498..18848 | + | 351 | WP_004182068.1 | hypothetical protein | - |
| HCV81_RS27005 () | 19484..19840 | + | 357 | WP_004152717.1 | hypothetical protein | - |
| HCV81_RS27010 () | 19901..20113 | + | 213 | WP_004152718.1 | hypothetical protein | - |
| HCV81_RS27015 () | 20124..20348 | + | 225 | WP_004152719.1 | hypothetical protein | - |
| HCV81_RS27020 () | 20429..20749 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HCV81_RS27025 () | 20739..21017 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| HCV81_RS27030 () | 21018..21431 | + | 414 | WP_004152722.1 | helix-turn-helix domain-containing protein | - |
| HCV81_RS27035 () | 22265..23086 | + | 822 | WP_004178064.1 | DUF945 domain-containing protein | - |
| HCV81_RS27040 () | 23119..23448 | + | 330 | WP_011977736.1 | hypothetical protein | - |
| HCV81_RS27045 () | 23481..23966 | - | 486 | WP_004178063.1 | hypothetical protein | VF |
| HCV81_RS27050 () | 24400..24792 | + | 393 | WP_004178062.1 | relaxosome protein TraM | - |
| HCV81_RS27055 () | 25015..25701 | + | 687 | WP_011977735.1 | transcriptional regulator TraJ family protein | - |
| HCV81_RS27060 () | 25785..26156 | + | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| HCV81_RS27065 () | 26210..26578 | + | 369 | WP_004178060.1 | type IV conjugative transfer system pilin TraA | - |
| HCV81_RS27070 () | 26592..26897 | + | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| HCV81_RS27075 () | 26917..27483 | + | 567 | WP_004152602.1 | type IV conjugative transfer system protein TraE | - |
| HCV81_RS27080 () | 27470..28210 | + | 741 | WP_004152601.1 | type-F conjugative transfer system secretin TraK | - |
| HCV81_RS27085 () | 28210..29634 | + | 1425 | WP_004152600.1 | conjugal transfer protein TraB | - |
| HCV81_RS27090 () | 29627..30223 | + | 597 | WP_004152599.1 | conjugal transfer protein TraP | - |
| HCV81_RS27095 () | 30246..30815 | + | 570 | WP_004152598.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HCV81_RS27100 () | 30947..31357 | + | 411 | WP_004152597.1 | lipase chaperone | - |
| HCV81_RS27105 () | 31362..31652 | + | 291 | WP_004152596.1 | hypothetical protein | - |
| HCV81_RS27110 () | 31676..31894 | + | 219 | WP_004171484.1 | hypothetical protein | - |
| HCV81_RS27115 () | 31895..32212 | + | 318 | WP_004152595.1 | hypothetical protein | - |
| HCV81_RS27120 () | 32279..32683 | + | 405 | WP_004152594.1 | hypothetical protein | - |
| HCV81_RS27125 () | 32979..33377 | + | 399 | WP_004153071.1 | hypothetical protein | - |
| HCV81_RS27130 () | 33449..36088 | + | 2640 | WP_004152592.1 | type IV secretion system protein TraC | - |
| HCV81_RS27135 () | 36088..36477 | + | 390 | WP_004152591.1 | type-F conjugative transfer system protein TrbI | - |
| HCV81_RS27140 () | 36477..37103 | + | 627 | WP_004152590.1 | type-F conjugative transfer system protein TraW | - |
| HCV81_RS27145 () | 37114..38106 | + | 993 | WP_059065823.1 | conjugal transfer pilus assembly protein TraU | - |
| HCV81_RS27150 () | 38119..38757 | + | 639 | WP_004152682.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HCV81_RS27155 () | 38805..40760 | + | 1956 | WP_004153093.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HCV81_RS27160 () | 40792..41028 | + | 237 | WP_004152683.1 | conjugal transfer protein TrbE | - |
| HCV81_RS27165 () | 41256..41582 | + | 327 | WP_004152685.1 | hypothetical protein | - |
| HCV81_RS27170 () | 41603..42355 | + | 753 | WP_004152686.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HCV81_RS27175 () | 42366..42605 | + | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HCV81_RS27180 () | 42577..43149 | + | 573 | WP_004152688.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HCV81_RS27185 () | 43142..43570 | + | 429 | WP_004152689.1 | hypothetical protein | - |
| HCV81_RS27190 () | 43557..44927 | + | 1371 | WP_004178055.1 | conjugal transfer protein TraH | - |
| HCV81_RS27195 () | 44927..47776 | + | 2850 | WP_004178054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HCV81_RS27200 () | 47782..48306 | + | 525 | Protein_63 | conjugal transfer protein TraS | - |
| HCV81_RS27205 () | 48498..49229 | + | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| HCV81_RS27210 () | 49589..51898 | + | 2310 | Protein_65 | type IV conjugative transfer system coupling protein TraD | - |
| HCV81_RS27215 () | 51898..57159 | + | 5262 | WP_004153029.1 | Multifunctional conjugation protein TraI | Relaxase |
| HCV81_RS27220 () | 57239..57964 | + | 726 | WP_004152303.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HCV81_RS27225 () | 58122..58718 | + | 597 | WP_004178053.1 | fertility inhibition protein FinO | - |
| HCV81_RS27230 () | 58738..59085 | + | 348 | WP_004152301.1 | hypothetical protein | - |
| HCV81_RS27235 () | 59300..59845 | - | 546 | WP_004178052.1 | hypothetical protein | - |
| HCV81_RS27240 () | 60202..62523 | + | 2322 | WP_004178051.1 | klebicin B-related nuclease bacteriocin | - |
| HCV81_RS27245 () | 62525..62803 | + | 279 | WP_004152296.1 | bacteriocin immunity protein | - |
| HCV81_RS27250 () | 63144..63623 | + | 480 | WP_009485932.1 | Phospholipase D | VF |
| HCV81_RS27255 () | 63944..64222 | + | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| HCV81_RS27260 () | 64439..64516 | + | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| HCV81_RS27265 () | 64509..65366 | + | 858 | WP_004152292.1 | incFII family plasmid replication initiator RepA | - |
| HCV81_RS27270 () | 66813..69008 | - | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| HCV81_RS27275 () | 69005..70321 | - | 1317 | WP_004152291.1 | ATP-binding protein | - |
| HCV81_RS27280 () | 70325..72634 | - | 2310 | WP_004152290.1 | TerB N-terminal domain-containing protein | - |
| HCV81_RS27285 () | 73279..74248 | - | 970 | Protein_80 | IS5 family transposase IS903B | Transposase |
| HCV81_RS27290 () | 74340..75593 | - | 1254 | WP_003846917.1 | lactose permease | - |
| HCV81_RS27295 () | 75645..78719 | - | 3075 | WP_004152287.1 | beta-galactosidase | - |
| HCV81_RS27300 () | 78841..79923 | - | 1083 | WP_004152286.1 | DNA-binding transcriptional repressor LacI | - |
| HCV81_RS27305 () | 80384..81394 | + | 1011 | WP_059065794.1 | zinc-binding alcohol dehydrogenase family protein | - |
| HCV81_RS27310 () | 81797..82800 | + | 1004 | Protein_85 | IS110 family transposase IS4321R | Transposase |
| HCV81_RS27315 () | 83092..83760 | + | 669 | WP_044117068.1 | IS6 family transposase IS26 | Transposase |
| HCV81_RS27320 () | 83966..84274 | - | 309 | Protein_87 | IS5 family transposase ISThi1 | Transposase |
| HCV81_RS27325 () | 84616..85443 | + | 828 | WP_004153729.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| HCV81_RS27330 () | 85440..86303 | + | 864 | WP_004152695.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| HCV81_RS27335 () | 86312..87139 | + | 828 | WP_004152694.1 | phosphonate ABC transporter, permease protein PhnE | - |
| HCV81_RS27340 () | 87148..88158 | + | 1011 | WP_004152693.1 | phosphonate dehydrogenase PtxD | - |
| HCV81_RS27345 () | 88152..89021 | + | 870 | WP_004152692.1 | HTH-type transcriptional activator CmpR | VF |
| HCV81_RS27350 () | 89129..89648 | + | 520 | Protein_93 | IS5 family transposase ISPst7 | Transposase |
| HCV81_RS27355 () | 90230..91210 | - | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| HCV81_RS27360 () | 91469..92166 | - | 698 | Protein_95 | IS1 family transposase IS1X2 | Transposase |
| HCV81_RS27365 () | 92351..92467 | - | 117 | Protein_96 | transposase domain-containing protein | - |
| HCV81_RS27370 () | 92412..92675 | - | 264 | WP_004118209.1 | transposase | - |
| HCV81_RS27375 () | 92690..92953 | + | 264 | WP_004118208.1 | hypothetical protein | - |
| HCV81_RS27380 () | 93197..93478 | + | 282 | WP_004152118.1 | helix-turn-helix domain-containing protein | - |
| HCV81_RS27385 () | 93513..94082 | + | 570 | WP_004152117.1 | Spore protein SP21 | VF |
| HCV81_RS27390 () | 94197..96992 | + | 2796 | WP_004152116.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| HCV81_RS27395 () | 96992..97189 | + | 198 | WP_004152115.1 | hypothetical protein | - |
| HCV81_RS27400 () | 97427..98176 | + | 750 | WP_009483782.1 | phosphate-starvation-inducible PsiE family protein | - |
| HCV81_RS27405 () | 98163..99125 | + | 963 | WP_004152113.1 | M48 family metalloprotease | - |
| HCV81_RS27410 () | 99213..100467 | + | 1255 | Protein_105 | IS3 family transposase ISKpn38 | Transposase |
| HCV81_RS27415 () | 100968..102314 | - | 1347 | WP_020314316.1 | ISNCY family transposase ISLad2 | Transposase |
| HCV81_RS27420 () | 102526..103008 | - | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HCV81_RS27425 () | 102996..103262 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HCV81_RS27430 () | 103438..103693 | - | 256 | Protein_109 | hypothetical protein | - |
| HCV81_RS27435 () | 103769..104026 | - | 258 | WP_004152107.1 | hypothetical protein | - |
| HCV81_RS27440 () | 104075..104278 | - | 204 | WP_004152106.1 | hemolysin expression modulator Hha | - |
| HCV81_RS27445 () | 104312..104680 | - | 369 | WP_004152105.1 | hypothetical protein | - |
| HCV81_RS27450 () | 104724..105218 | - | 495 | WP_004152104.1 | DNA-binding protein | - |
| HCV81_RS27455 () | 105249..105824 | - | 576 | WP_004152103.1 | hypothetical protein | - |
| HCV81_RS27460 () | 105812..106081 | - | 270 | WP_004152102.1 | hypothetical protein | - |
| HCV81_RS27465 () | 106439..106789 | + | 351 | WP_004152101.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HCV81_RS27470 () | 106839..107201 | + | 363 | WP_004152100.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HCV81_RS27475 () | 107219..108970 | + | 1752 | WP_004152099.1 | Arsenical pump-driving ATPase | VF |
| HCV81_RS27480 () | 109018..110307 | + | 1290 | WP_004152098.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HCV81_RS27485 () | 110320..110745 | + | 426 | WP_004152097.1 | glutaredoxin-dependent arsenate reductase | - |
| HCV81_RS27490 () | 110778..111314 | - | 537 | WP_004152096.1 | GNAT family N-acetyltransferase | - |
| HCV81_RS27495 () | 111436..113186 | - | 1751 | Protein_122 | arsenical pump-driving ATPase | - |
| HCV81_RS27500 () | 113211..113573 | - | 363 | WP_004152095.1 | arsenic metallochaperone ArsD family protein | - |
| HCV81_RS27505 () | 113649..114194 | - | 546 | WP_004182005.1 | sigma-70 family RNA polymerase sigma factor | - |
| HCV81_RS27510 () | 114203..114916 | - | 714 | WP_004152093.1 | arsenical resistance protein ArsH | - |
| HCV81_RS27515 () | 114913..115239 | - | 327 | WP_004152092.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HCV81_RS27520 () | 115571..116068 | + | 498 | WP_004152091.1 | GNAT family N-acetyltransferase | - |
| HCV81_RS27525 () | 116118..116627 | - | 510 | WP_031944101.1 | aquaporin | - |
| HCV81_RS27530 () | 116689..118309 | + | 1621 | Protein_129 | ISL3 family transposase ISEc38 | Transposase |
| HCV81_RS27535 () | 118370..118549 | + | 180 | WP_004152086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HCV81_RS27540 () | 118780..119214 | - | 435 | WP_004152085.1 | copper resistance system metallochaperone PcoE | - |
| HCV81_RS27545 () | 119431..120831 | - | 1401 | WP_004152084.1 | copper resistance membrane spanning protein PcoS | - |
| HCV81_RS27550 () | 120828..121508 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| HCV81_RS27555 () | 121563..122492 | - | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| HCV81_RS27560 () | 122497..122877 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| HCV81_RS27565 () | 122917..123807 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| HCV81_RS27570 () | 123813..125630 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| HCV81_RS27575 () | 125864..126313 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| HCV81_RS27580 () | 126709..127688 | - | 980 | Protein_139 | IS5 family transposase IS5D | Transposase |
| HCV81_RS27585 () | 127801..128538 | + | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| HCV81_RS27590 () | 128572..128769 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| HCV81_RS27595 () | 128810..131257 | - | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| HCV81_RS27600 () | 131384..131824 | - | 441 | WP_000758228.1 | hypothetical protein | - |
| HCV81_RS27605 () | 131911..135057 | - | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| HCV81_RS27610 () | 135068..136360 | - | 1293 | WP_004152079.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| HCV81_RS27615 () | 136474..136827 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| HCV81_RS27620 () | 136856..138241 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| HCV81_RS27625 () | 138431..139111 | + | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| HCV81_RS27630 () | 139104..140579 | + | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| HCV81_RS27635 () | 140830..141261 | + | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| HCV81_RS27640 () | 141557..142099 | - | 543 | Protein_151 | ISL3 family transposase ISKpn25 | Transposase |
| HCV81_RS27645 () | 142115..142599 | - | 485 | Protein_152 | IS1 family transposase IS1X2 | Transposase |
| HCV81_RS27650 () | 142690..143897 | + | 1208 | WP_085955172.1 | IS3 family transposase ISEcl1 | Transposase |
| HCV81_RS27655 () | 144088..144785 | + | 698 | Protein_154 | IS1 family transposase IS1X2 | Transposase |
| HCV81_RS27660 () | 144937..146934 | + | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| HCV81_RS27665 () | 146997..148274 | + | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| HCV81_RS27670 () | 149256..150692 | - | 1437 | WP_080895248.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| HCV81_RS27675 () | 151312..151569 | + | 258 | WP_004197688.1 | hypothetical protein | - |
| HCV81_RS27680 () | 152242..153210 | - | 969 | WP_011977741.1 | IS5 family transposase IS903B | Transposase |
| HCV81_RS27685 () | 153230..153541 | + | 312 | WP_071527918.1 | EAL domain-containing protein | - |
| HCV81_RS27690 () | 153568..154515 | - | 948 | WP_004152065.1 | sensor domain-containing diguanylate cyclase | - |
| HCV81_RS27695 () | 155659..156399 | + | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| HCV81_RS27700 () | 157116..158126 | - | 1011 | WP_004152063.1 | RepB family plasmid replication initiator protein | - |
| HCV81_RS27705 () | 158878..160044 | + | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| HCV81_RS27710 () | 160044..161015 | + | 972 | WP_004152062.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|