MGE detailed information
MGE type: Genomic_island MGE length: 15260 bp
Accession: NZ_CP061367 Location: 3545225..3560484 Organism: Shigella sonnei strain 6207 Replicon: chromosome
Accession: NZ_CP061367 Location: 3545225..3560484 Organism: Shigella sonnei strain 6207 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC759_RS18765 () | 3540820..3543453 | + | 2634 | WP_005138565.1 | lipid-binding membrane homeostasis protein YebT | - |
| IC759_RS18770 () | 3543534..3544973 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IC759_RS18775 () | 3545091..3545174 | + | 84 | Protein_3503 | DUF1480 family protein | - |
| IC759_RS18785 () | 3545946..3546104 | + | 159 | Protein_3505 | DUF1480 family protein | - |
| IC759_RS18790 () | 3546209..3546400 | + | 192 | WP_001296140.1 | YebW family protein | - |
| IC759_RS18795 () | 3546401..3546601 | - | 201 | Protein_3507 | serine/threonine-protein phosphatase | - |
| IC759_RS18800 () | 3547539..3547540 | - | 2 | WP_151360642.1 | IS3 family transposase IS600 | Transposase |
| IC759_RS18805 () | 3547856..3548161 | - | 306 | Protein_3509 | serine/threonine-protein phosphatase | - |
| IC759_RS18810 () | 3548216..3548913 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| IC759_RS18815 () | 3548927..3549100 | - | 174 | Protein_3511 | metallophosphoesterase | - |
| IC759_RS18820 () | 3549751..3550906 | + | 1156 | WP_085948182.1 | IS3 family transposase ISSd1 | Transposase |
| IC759_RS18825 () | 3551117..3552823 | + | 1707 | WP_000936825.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| IC759_RS18830 () | 3553835..3553836 | - | 2 | WP_151359765.1 | IS3 family transposase ISSfl10 | Transposase |
| IC759_RS18835 () | 3554342..3554662 | + | 321 | WP_241556168.1 | exodeoxyribonuclease VIII | - |
| IC759_RS18840 () | 3554640..3554756 | + | 117 | Protein_3516 | host-nuclease inhibitor Gam family protein | - |
| IC759_RS18845 () | 3554819..3555974 | + | 1156 | WP_094096616.1 | IS3 family transposase IS600 | Transposase |
| IC759_RS18850 () | 3556020..3556202 | + | 183 | Protein_3518 | host-nuclease inhibitor Gam family protein | - |
| IC759_RS18855 () | 3556208..3557305 | + | 1098 | WP_001173292.1 | AAA family ATPase | - |
| IC759_RS18860 () | 3557356..3557544 | + | 189 | WP_263452903.1 | DUF1187 family protein | - |
| - () | 3557362..3557540 | - | 179 | NuclAT_1 | - | - |
| - () | 3557362..3557540 | - | 179 | NuclAT_1 | - | - |
| - () | 3557362..3557540 | - | 179 | NuclAT_1 | - | - |
| - () | 3557362..3557540 | - | 179 | NuclAT_1 | - | - |
| IC759_RS18865 () | 3557651..3557911 | + | 261 | WP_077447296.1 | excisionase | - |
| IC759_RS18870 () | 3557940..3558637 | + | 698 | WP_229318984.1 | IS1-like element IS1A family transposase | - |
| IC759_RS18875 () | 3558674..3559750 | + | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| - | 3559881..3560115 | + | 235 | - | - | Antitoxin Detail |
| - | 3559882..3559985 | - | 104 | - | - | Toxin Detail |
| IC759_RS18880 () | 3560143..3560484 | - | 342 | WP_000976476.1 | YebY family protein | - |
| IC759_RS18885 () | 3560497..3561369 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| IC759_RS18890 () | 3561373..3561747 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| IC759_RS18895 () | 3561886..3562116 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| IC759_RS18900 () | 3562218..3562874 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| IC759_RS18905 () | 3562898..3563560 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|