MGE detailed information
MGE type: Prophage MGE length: 24644 bp
Accession: NZ_CP061339 Location: 2528516..2553159 Organism: Escherichia coli strain M00057 Replicon: chromosome
Accession: NZ_CP061339 Location: 2528516..2553159 Organism: Escherichia coli strain M00057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC755_RS12085 () | 2524370..2525170 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| IC755_RS12090 () | 2525183..2526034 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| IC755_RS12095 () | 2526090..2526548 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| IC755_RS12100 () | 2526978..2527544 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| IC755_RS12105 () | 2527541..2528350 | - | 810 | WP_000010097.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| IC755_RS12110 () | 2528516..2528725 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| IC755_RS12115 () | 2528738..2528881 | - | 144 | WP_001295496.1 | YobF family protein | - |
| IC755_RS12120 () | 2529551..2529838 | - | 288 | WP_001006866.1 | YebO family protein | - |
| IC755_RS12125 () | 2529913..2530056 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| IC755_RS12130 () | 2530215..2530454 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| IC755_RS12135 () | 2530570..2531721 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IC755_RS12140 () | 2531821..2532612 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| IC755_RS12145 () | 2532789..2534162 | + | 1374 | WP_001309553.1 | MFS transporter | - |
| IC755_RS12150 () | 2534208..2535089 | - | 882 | WP_000984517.1 | protease HtpX | - |
| IC755_RS12155 () | 2535281..2537329 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| IC755_RS12160 () | 2537349..2538047 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| IC755_RS12165 () | 2538144..2538641 | - | 498 | WP_188926223.1 | L-methionine (R)-S-oxide reductase | - |
| IC755_RS12170 () | 2538771..2540054 | + | 1284 | WP_188926225.1 | membrane integrity lipid transport subunit YebS | - |
| IC755_RS12175 () | 2540023..2542656 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| IC755_RS12180 () | 2542736..2544175 | + | 1440 | WP_188926226.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IC755_RS12185 () | 2544293..2544529 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| IC755_RS12190 () | 2544634..2544825 | + | 192 | WP_001296140.1 | YebW family protein | - |
| IC755_RS12195 () | 2544826..2545482 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - () | 2545579..2545850 | + | 272 | - | - | Antitoxin Detail |
| - () | 2545617..2545720 | - | 104 | - | - | Toxin Detail |
| IC755_RS12200 () | 2545878..2546219 | - | 342 | WP_000976481.1 | YebY family protein | - |
| IC755_RS12205 () | 2546232..2547104 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| IC755_RS12210 () | 2547108..2547482 | - | 375 | WP_000168743.1 | CopC domain-containing protein YobA | - |
| IC755_RS12215 () | 2547621..2547851 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| IC755_RS12220 () | 2547953..2548609 | + | 657 | WP_000011654.1 | carbon-nitrogen hydrolase family protein | - |
| IC755_RS12225 () | 2548633..2549295 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| IC755_RS12230 () | 2549292..2551352 | - | 2061 | WP_188926228.1 | oligopeptidase B | - |
| IC755_RS12235 () | 2551508..2551933 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| IC755_RS12240 () | 2551990..2553159 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| IC755_RS12245 () | 2553323..2553982 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| IC755_RS12250 () | 2554309..2554665 | - | 357 | WP_001295500.1 | protein YebF | - |
| IC755_RS12255 () | 2554732..2555022 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| IC755_RS12260 () | 2555156..2556334 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| IC755_RS12265 () | 2556389..2557030 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|