MGE detailed information
MGE type: Genomic_island MGE length: 36498 bp
Accession: NZ_CP061206 Location: 1283733..1320230 Organism: Escherichia coli strain DA61218 Replicon: chromosome
Accession: NZ_CP061206 Location: 1283733..1320230 Organism: Escherichia coli strain DA61218 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICI53_RS06030 () | 1280264..1280989 | - | 726 | WP_000066579.1 | type 1 fimbria chaperone FimC | - |
| ICI53_RS06035 () | 1281026..1281565 | - | 540 | WP_000824100.1 | type 1 fimbrial protein | - |
| ICI53_RS06040 () | 1281630..1282178 | - | 549 | WP_000695571.1 | type 1 fimbrial major subunit FimA | - |
| ICI53_RS06045 () | 1282659..1283255 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| ICI53_RS06050 () | 1283733..1284335 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| ICI53_RS06055 () | 1285800..1286516 | + | 717 | WP_001304536.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ICI53_RS06060 () | 1286536..1287642 | + | 1107 | WP_001304537.1 | N-acetylneuraminate epimerase | - |
| ICI53_RS06065 () | 1287707..1288687 | + | 981 | WP_000991426.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ICI53_RS06070 () | 1288695..1288817 | - | 123 | WP_001327357.1 | hypothetical protein | - |
| ICI53_RS06075 () | 1288913..1289335 | + | 423 | WP_077634196.1 | HNH endonuclease | - |
| ICI53_RS06080 () | 1289446..1289775 | - | 330 | WP_000988223.1 | hypothetical protein | - |
| ICI53_RS06085 () | 1290069..1291105 | + | 1037 | Protein_1186 | IS630 family transposase ISEc40 | Transposase |
| ICI53_RS06090 () | 1291089..1291803 | - | 715 | Protein_1187 | hypothetical protein | - |
| ICI53_RS06095 () | 1292097..1292348 | + | 252 | WP_000594386.1 | DUF1819 family protein | - |
| ICI53_RS06100 () | 1292517..1293422 | + | 906 | WP_000099232.1 | WYL domain-containing protein | - |
| ICI53_RS06105 () | 1293422..1296700 | + | 3279 | WP_000419018.1 | DEAD/DEAH box helicase family protein | - |
| ICI53_RS06110 () | 1296697..1297398 | + | 702 | WP_000081952.1 | DUF4391 domain-containing protein | - |
| ICI53_RS06115 () | 1297682..1297840 | + | 159 | WP_011076785.1 | ATP-binding domain-containing protein | - |
| ICI53_RS06120 () | 1297985..1299997 | + | 2013 | WP_000413174.1 | site-specific DNA-methyltransferase | - |
| ICI53_RS06125 () | 1300011..1303082 | + | 3072 | WP_000768220.1 | DEAD/DEAH box helicase family protein | - |
| ICI53_RS06130 () | 1303325..1304398 | - | 1074 | WP_001327207.1 | Prophage integrase IntA ; Integrase | Integrase |
| ICI53_RS06135 () | 1304862..1305014 | - | 153 | WP_001555250.1 | hypothetical protein | - |
| ICI53_RS06140 () | 1305099..1305296 | - | 198 | WP_000839235.1 | DUF957 domain-containing protein | - |
| ICI53_RS06145 () | 1305308..1305799 | - | 492 | WP_000976831.1 | hypothetical protein | - |
| ICI53_RS06150 () | 1305796..1306170 | - | 375 | WP_000854683.1 | TA system toxin CbtA family protein | Toxin Detail |
| ICI53_RS06155 () | 1306260..1306622 | - | 363 | WP_024186744.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ICI53_RS06160 () | 1306701..1306922 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| ICI53_RS06165 () | 1306991..1307467 | - | 477 | WP_001186708.1 | RadC family protein | - |
| ICI53_RS06170 () | 1307483..1307968 | - | 486 | WP_000206667.1 | antirestriction protein | - |
| ICI53_RS06175 () | 1308060..1308878 | - | 819 | WP_001234592.1 | DUF945 domain-containing protein | - |
| ICI53_RS06180 () | 1309218..1310288 | - | 1071 | WP_000102675.1 | hypothetical protein | VF |
| ICI53_RS06185 () | 1310285..1311190 | - | 906 | WP_000203561.1 | chemotaxis protein | - |
| ICI53_RS06190 () | 1311187..1313571 | - | 2385 | WP_000544631.1 | dynamin family protein | - |
| ICI53_RS06195 () | 1313682..1316528 | - | 2847 | WP_021522591.1 | Ag43/Cah family autotransporter adhesin | - |
| ICI53_RS06200 () | 1316900..1317772 | - | 873 | WP_001069690.1 | GTPase family protein | - |
| ICI53_RS06205 () | 1317871..1318743 | - | 873 | WP_000241620.1 | hypothetical protein | - |
| ICI53_RS06210 () | 1319784..1320257 | - | 474 | Protein_1211 | IS3 family transposase IS629 | Transposase |
| ICI53_RS06215 () | 1320347..1321855 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| ICI53_RS06220 () | 1322528..1323268 | - | 741 | Protein_1213 | IS3 family transposase | - |
| ICI53_RS06225 () | 1323558..1324166 | - | 609 | WP_063512650.1 | hypothetical protein | - |
| ICI53_RS06230 () | 1324254..1324460 | - | 207 | WP_000188790.1 | AlpA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|