MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157028 bp
Accession: NZ_CP061187 Location: 1..157028 Organism: Escherichia coli strain LD67-1 Replicon: plasmid pLD67-1-157kb
Accession: NZ_CP061187 Location: 1..157028 Organism: Escherichia coli strain LD67-1 Replicon: plasmid pLD67-1-157kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IB283_RS24040 () | 1..876 | + | 876 | Protein_0 | RepB family plasmid replication initiator protein | - |
| IB283_RS24045 () | 2025..2378 | + | 354 | WP_000423602.1 | hypothetical protein | - |
| IB283_RS24050 () | 2396..2746 | + | 351 | WP_024152015.1 | plasmid transfer protein | - |
| IB283_RS24055 () | 2758..3546 | + | 789 | WP_000783153.1 | pilus assembly protein | - |
| IB283_RS24060 () | 3546..4817 | + | 1272 | WP_000592090.1 | type-F conjugative transfer system secretin TraK | - |
| IB283_RS24065 () | 4819..5280 | + | 462 | WP_000521240.1 | hypothetical protein | - |
| IB283_RS24070 () | 5270..6625 | + | 1356 | WP_000351841.1 | IncHI-type conjugal transfer protein TrhB | - |
| IB283_RS24075 () | 6693..7115 | + | 423 | WP_000251250.1 | hypothetical protein | - |
| IB283_RS24080 () | 7234..7986 | + | 753 | WP_183079335.1 | protein-disulfide isomerase HtdT | - |
| IB283_RS24085 () | 7996..8946 | + | 951 | WP_001022587.1 | IncHI-type conjugal transfer lipoprotein TrhV | - |
| IB283_RS24090 () | 8955..11636 | + | 2682 | WP_000387412.1 | TraC family protein | - |
| IB283_RS24095 () | 15473..16726 | + | 1254 | WP_032084678.1 | Plasmid partition protein A | VF |
| IB283_RS24100 () | 16723..17727 | + | 1005 | WP_032192066.1 | ParB N-terminal domain-containing protein | - |
| IB283_RS24105 () | 17789..18178 | - | 390 | WP_001572421.1 | hypothetical protein | - |
| IB283_RS24110 () | 18175..18696 | - | 522 | WP_000598516.1 | hypothetical protein | - |
| IB283_RS24115 () | 18689..19525 | - | 837 | WP_042634275.1 | hypothetical protein | - |
| IB283_RS24120 () | 19522..20469 | - | 948 | WP_046788422.1 | metallophosphoesterase | - |
| IB283_RS24125 () | 20833..21870 | + | 1038 | WP_000818955.1 | hypothetical protein | - |
| IB283_RS24130 () | 21882..22520 | + | 639 | WP_001107537.1 | hypothetical protein | - |
| IB283_RS24135 () | 22924..23376 | + | 453 | WP_000952689.1 | hypothetical protein | - |
| IB283_RS24140 () | 23366..23791 | + | 426 | WP_000836980.1 | hypothetical protein | - |
| IB283_RS24145 () | 23800..24354 | + | 555 | WP_000235777.1 | hypothetical protein | - |
| IB283_RS24150 () | 24474..28778 | + | 4305 | WP_001232107.1 | IncHI-type conjugal transfer protein RSP | - |
| IB283_RS24155 () | 29056..29568 | + | 513 | WP_001286759.1 | IncHI-type conjugal transfer protein TrhF | - |
| IB283_RS24160 () | 29555..31066 | + | 1512 | WP_001256133.1 | hypothetical protein | - |
| IB283_RS24165 () | 31211..32266 | + | 1056 | WP_181196458.1 | IncHI-type conjugal transfer protein TrhU | - |
| IB283_RS24170 () | 32285..35473 | + | 3189 | WP_000776705.1 | IncHI-type conjugal transfer protein TrhN | - |
| IB283_RS24175 () | 35502..36374 | - | 873 | WP_000771832.1 | hypothetical protein | - |
| IB283_RS24180 () | 36554..38338 | + | 1785 | WP_042634277.1 | IncHI-type conjugal transfer helicase TrhI | - |
| IB283_RS24185 () | 38733..39605 | + | 873 | WP_000041927.1 | hypothetical protein | - |
| IB283_RS24190 () | 39663..40040 | + | 378 | WP_000120822.1 | hypothetical protein | - |
| IB283_RS24195 () | 40101..41078 | + | 978 | WP_042634278.1 | hypothetical protein | - |
| IB283_RS24200 () | 41136..42194 | + | 1059 | WP_000063335.1 | AAA family ATPase | - |
| IB283_RS24205 () | 42326..42499 | + | 174 | WP_001176647.1 | hypothetical protein | - |
| IB283_RS24210 () | 42563..43690 | + | 1128 | WP_000174395.1 | DUF3150 domain-containing protein | - |
| IB283_RS24215 () | 43768..45780 | + | 2013 | WP_046788423.1 | VWA domain-containing protein | - |
| IB283_RS24220 () | 45852..46073 | + | 222 | WP_042634307.1 | hypothetical protein | - |
| IB283_RS24225 () | 46187..47419 | + | 1233 | WP_000220381.1 | toprim domain-containing protein | - |
| IB283_RS24230 () | 47690..48211 | + | 522 | WP_001010933.1 | hypothetical protein | - |
| IB283_RS24235 () | 48290..49168 | + | 879 | WP_000762004.1 | hypothetical protein | - |
| IB283_RS24240 () | 49239..50174 | + | 936 | WP_000691118.1 | hypothetical protein | - |
| IB283_RS24245 () | 50243..51163 | + | 921 | WP_000991699.1 | hypothetical protein | - |
| IB283_RS24250 () | 51230..52168 | + | 939 | WP_000472043.1 | hypothetical protein | - |
| IB283_RS24255 () | 52340..53296 | + | 957 | WP_046788424.1 | hypothetical protein | - |
| IB283_RS24260 () | 53560..53835 | + | 276 | WP_001004201.1 | hypothetical protein | - |
| IB283_RS24265 () | 53880..54470 | + | 591 | WP_000578892.1 | hypothetical protein | - |
| IB283_RS24270 () | 54478..54735 | + | 258 | WP_001371933.1 | hypothetical protein | - |
| IB283_RS24275 () | 54809..55345 | + | 537 | WP_000107168.1 | hypothetical protein | - |
| IB283_RS24280 () | 55425..55808 | + | 384 | WP_001424628.1 | hypothetical protein | - |
| IB283_RS24285 () | 55899..56861 | + | 963 | WP_000119427.1 | DNA replication protein | - |
| IB283_RS24290 () | 56871..57776 | + | 906 | WP_001198594.1 | hypothetical protein | - |
| IB283_RS24295 () | 57712..58056 | + | 345 | WP_001805195.1 | hypothetical protein | - |
| IB283_RS24300 () | 58078..59253 | - | 1176 | WP_000795947.1 | tyrosine-type recombinase/integrase | - |
| IB283_RS24305 () | 59424..59636 | + | 213 | WP_001285422.1 | hypothetical protein | - |
| IB283_RS24310 () | 59997..61079 | + | 1083 | WP_001232449.1 | hypothetical protein | - |
| IB283_RS24315 () | 61246..62745 | - | 1500 | WP_001284313.1 | kinase | - |
| IB283_RS24320 () | 62771..64408 | - | 1638 | WP_000081622.1 | protein phosphatase 2C domain-containing protein | - |
| IB283_RS24325 () | 64408..65448 | - | 1041 | WP_001253653.1 | VWA domain-containing protein | - |
| IB283_RS24330 () | 65534..66172 | - | 639 | WP_001253658.1 | VWA domain-containing protein | - |
| IB283_RS24335 () | 66172..66813 | - | 642 | WP_000116681.1 | TerD family protein | - |
| IB283_RS24340 () | 66836..67474 | - | 639 | WP_001388628.1 | VWA domain-containing protein | - |
| IB283_RS24345 () | 67937..68404 | - | 468 | WP_001176767.1 | tellurium resistance protein TerW | - |
| IB283_RS24350 () | 68422..69630 | - | 1209 | WP_000506887.1 | DUF4236 domain-containing protein | - |
| IB283_RS24355 () | 69641..70597 | - | 957 | WP_000797366.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| IB283_RS24360 () | 70597..71676 | - | 1080 | WP_042634304.1 | cysteine protease StiP family protein | - |
| IB283_RS24365 () | 71678..72451 | - | 774 | WP_001040059.1 | hypothetical protein | - |
| IB283_RS24370 () | 72444..73586 | - | 1143 | WP_001285478.1 | phosphoribosyltransferase domain-containing protein | - |
| IB283_RS24375 () | 73596..74654 | - | 1059 | WP_001035162.1 | ATP-grasp domain-containing protein | - |
| IB283_RS24380 () | 74978..75559 | + | 582 | WP_042634303.1 | tellurium resistance TerZ family protein | - |
| IB283_RS24385 () | 75559..76716 | + | 1158 | WP_001054787.1 | TerD family protein | - |
| IB283_RS24390 () | 76739..77194 | + | 456 | WP_000007448.1 | tellurite resistance TerB family protein | - |
| IB283_RS24395 () | 77217..78257 | + | 1041 | WP_000255079.1 | tellurium resistance membrane protein TerC | - |
| IB283_RS24400 () | 78306..78884 | + | 579 | WP_000116677.1 | tellurium resistance membrane protein TerD | - |
| IB283_RS24405 () | 78952..79527 | + | 576 | WP_000301242.1 | TerD family protein | - |
| IB283_RS24410 () | 79956..81197 | + | 1242 | WP_001053338.1 | VWA domain-containing protein | - |
| IB283_RS24415 () | 81760..82041 | - | 282 | WP_000077926.1 | hypothetical protein | - |
| IB283_RS24420 () | 82091..82282 | - | 192 | WP_000398480.1 | hypothetical protein | - |
| IB283_RS24425 () | 82374..82715 | - | 342 | WP_001151575.1 | hypothetical protein | - |
| IB283_RS24430 () | 83088..83480 | + | 393 | WP_000341066.1 | hypothetical protein | - |
| IB283_RS24435 () | 84084..84377 | + | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| IB283_RS24440 () | 84382..85707 | + | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| IB283_RS24445 () | 85768..85974 | + | 207 | WP_000134171.1 | hypothetical protein | - |
| IB283_RS24450 () | 86076..86486 | + | 411 | WP_000985911.1 | hypothetical protein | - |
| IB283_RS24455 () | 86499..87314 | + | 816 | WP_001572439.1 | HNH endonuclease | - |
| IB283_RS24460 () | 87568..87993 | + | 426 | WP_001043843.1 | hypothetical protein | - |
| IB283_RS24465 () | 88447..88683 | + | 237 | Protein_85 | hypothetical protein | - |
| IB283_RS24470 () | 88738..89037 | + | 300 | WP_001572440.1 | hypothetical protein | - |
| IB283_RS24475 () | 89350..91389 | - | 2040 | WP_032192809.1 | ATP-dependent helicase | - |
| IB283_RS24480 () | 91386..92372 | - | 987 | WP_001572342.1 | hypothetical protein | - |
| IB283_RS24485 () | 92958..93341 | + | 384 | Protein_89 | HNH endonuclease | - |
| IB283_RS24490 () | 93403..93606 | + | 204 | WP_001194555.1 | hypothetical protein | - |
| IB283_RS24495 () | 93948..94352 | - | 405 | WP_001287392.1 | H-NS histone family protein | - |
| IB283_RS24500 () | 94850..95086 | - | 237 | WP_000175476.1 | hypothetical protein | - |
| IB283_RS24505 () | 95128..95583 | - | 456 | WP_001572344.1 | hypothetical protein | - |
| IB283_RS24510 () | 95643..96308 | - | 666 | WP_000490638.1 | hypothetical protein | - |
| IB283_RS24515 () | 96366..96746 | - | 381 | WP_001426317.1 | hypothetical protein | - |
| IB283_RS24520 () | 97389..98207 | + | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
| IB283_RS24525 () | 98204..99409 | + | 1206 | WP_001572381.1 | hypothetical protein | - |
| IB283_RS24530 () | 99689..101008 | - | 1320 | WP_000078514.1 | DUF1173 family protein | - |
| IB283_RS24535 () | 101031..101198 | - | 168 | WP_000220758.1 | hypothetical protein | - |
| IB283_RS24540 () | 101259..102686 | - | 1428 | WP_000833382.1 | DNA cytosine methyltransferase | - |
| IB283_RS24545 () | 102933..103415 | + | 483 | WP_000637602.1 | thermonuclease family protein | - |
| IB283_RS24550 () | 103418..104314 | + | 897 | WP_000975182.1 | hypothetical protein | - |
| IB283_RS24555 () | 104536..104769 | + | 234 | WP_015059496.1 | hypothetical protein | - |
| IB283_RS24560 () | 105431..105661 | + | 231 | WP_001572393.1 | hypothetical protein | - |
| IB283_RS24565 () | 106222..107384 | + | 1163 | WP_094320334.1 | IS3 family transposase IS3 | Transposase |
| IB283_RS24570 () | 107469..107720 | + | 252 | WP_106642851.1 | hypothetical protein | - |
| IB283_RS24575 () | 107750..108157 | + | 408 | WP_000074418.1 | hypothetical protein | - |
| IB283_RS24580 () | 108208..108525 | - | 318 | WP_029698059.1 | hypothetical protein | - |
| IB283_RS24585 () | 108902..109252 | - | 351 | WP_031613424.1 | hypothetical protein | - |
| IB283_RS24590 () | 109362..111113 | - | 1752 | Protein_110 | Tn3-like element TnAs1 family transposase | - |
| IB283_RS24595 () | 111102..111509 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| IB283_RS24600 () | 111647..112531 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| IB283_RS24605 () | 112563..113762 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| IB283_RS24610 () | 113868..114518 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IB283_RS24615 () | 114550..114792 | - | 243 | WP_000844627.1 | transposase | - |
| IB283_RS24620 () | 114910..115500 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| IB283_RS24625 () | 115637..116209 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| IB283_RS24630 () | 116246..117637 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| IB283_RS24635 () | 117670..118098 | + | 429 | Protein_119 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| IB283_RS24640 () | 118417..119073 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IB283_RS24645 () | 119468..120084 | + | 617 | Protein_121 | transposase | - |
| IB283_RS24650 () | 120151..120855 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IB283_RS24655 () | 120909..121913 | - | 1005 | Protein_123 | class 1 integron integrase IntI1 | - |
| IB283_RS24660 () | 122086..122538 | + | 453 | WP_000237816.1 | NAD(+)--rifampin ADP-ribosyltransferase Arr-2 | - |
| IB283_RS24665 () | 122859..124118 | + | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| IB283_RS24670 () | 124383..125183 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| IB283_RS24675 () | 125200..125991 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IB283_RS24680 () | 126066..126539 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| IB283_RS24685 () | 126786..127490 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IB283_RS24690 () | 127545..127961 | + | 417 | Protein_130 | serine hydrolase | - |
| IB283_RS24695 () | 128114..129010 | + | 897 | Protein_131 | TCR/Tet family MFS transporter | - |
| IB283_RS24700 () | 128977..129165 | - | 189 | Protein_132 | IS91 family transposase | - |
| IB283_RS24705 () | 129277..129582 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| IB283_RS24710 () | 129610..130824 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| IB283_RS24715 () | 131041..131925 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| IB283_RS24720 () | 131956..132786 | - | 831 | Protein_136 | IS91 family transposase ISVsa3 | Transposase |
| IB283_RS24725 () | 132850..133554 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| IB283_RS24730 () | 133639..134040 | - | 402 | WP_046788546.1 | hypothetical protein | - |
| IB283_RS24735 () | 134049..137000 | - | 2952 | WP_015344976.1 | Tn3-like element TnAs3 family transposase | - |
| IB283_RS24740 () | 137003..137488 | - | 486 | WP_001774155.1 | recombinase family protein | - |
| IB283_RS24745 () | 137528..138232 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IB283_RS24750 () | 138297..139196 | + | 900 | Protein_142 | hypothetical protein | - |
| IB283_RS24755 () | 141194..142282 | - | 1089 | WP_000159529.1 | IncHI-type plasmid replication initiator protein RepHI2 | - |
| IB283_RS24760 () | 143390..145846 | - | 2457 | WP_001572417.1 | DUF4165 domain-containing protein | - |
| IB283_RS24765 () | 146341..147569 | + | 1229 | WP_152919722.1 | IS3 family transposase IS2 | Transposase |
| IB283_RS24770 () | 147585..148181 | + | 597 | WP_046788420.1 | hypothetical protein | - |
| IB283_RS24775 () | 148239..148520 | - | 282 | WP_000535422.1 | hypothetical protein | - |
| IB283_RS24780 () | 148501..148962 | - | 462 | WP_000502497.1 | hypothetical protein | - |
| IB283_RS24785 () | 149011..149187 | - | 177 | WP_000070863.1 | hypothetical protein | - |
| IB283_RS24790 () | 149184..150875 | - | 1692 | WP_042634269.1 | DUF4942 domain-containing protein | - |
| IB283_RS24795 () | 151123..152286 | - | 1164 | WP_000114859.1 | hypothetical protein | - |
| IB283_RS24800 () | 152656..153468 | + | 813 | WP_001121575.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| IB283_RS24805 () | 153477..154331 | - | 855 | WP_000970403.1 | hypothetical protein | - |
| IB283_RS24810 () | 154566..155282 | - | 717 | WP_046788421.1 | zinc finger-like domain-containing protein | - |
| IB283_RS24815 () | 155279..155479 | - | 201 | WP_000594931.1 | hypothetical protein | - |
| IB283_RS24820 () | 155497..156552 | - | 1056 | WP_001065779.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|