MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66568 bp
Accession: NZ_CP061186 Location: 1..66568 Organism: Escherichia coli strain LD67-1 Replicon: plasmid pLD67-1-MCR1
Accession: NZ_CP061186 Location: 1..66568 Organism: Escherichia coli strain LD67-1 Replicon: plasmid pLD67-1-MCR1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IB283_RS23640 () | 1..1029 | + | 1029 | WP_024172575.1 | replication initiation protein | - |
| IB283_RS23645 () | 2433..2594 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| IB283_RS23650 () | 2743..3339 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| IB283_RS23655 () | 3357..3641 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| IB283_RS23660 () | 3715..4380 | - | 666 | WP_015387337.1 | P-loop NTPase | - |
| IB283_RS23665 () | 4967..5296 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| IB283_RS23670 () | 5697..6212 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| IB283_RS23675 () | 6316..6858 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| IB283_RS23680 () | 6855..7109 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| IB283_RS23685 () | 7106..7348 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| IB283_RS23690 () | 7485..7817 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| IB283_RS23695 () | 7864..8739 | - | 876 | WP_063859951.1 | Beta-lactamase CTX-M-1 | ARG |
| IB283_RS23700 () | 8992..10254 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| IB283_RS23705 () | 10639..10888 | + | 250 | Protein_13 | hypothetical protein | - |
| IB283_RS23710 () | 11004..11291 | + | 288 | WP_000673430.1 | hypothetical protein | - |
| IB283_RS23715 () | 11301..11717 | + | 417 | WP_188322781.1 | phage tail protein | - |
| IB283_RS23720 () | 11714..12025 | + | 312 | WP_001310436.1 | hypothetical protein | - |
| IB283_RS23725 () | 12447..12629 | - | 183 | WP_001401700.1 | hypothetical protein | - |
| IB283_RS23730 () | 13187..13369 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| IB283_RS23735 () | 13394..13831 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| IB283_RS23740 () | 13962..14282 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| IB283_RS23745 () | 14616..14794 | - | 179 | Protein_21 | hypothetical protein | - |
| IB283_RS23750 () | 14831..15094 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| IB283_RS23755 () | 15096..15515 | - | 420 | WP_001708405.1 | hypothetical protein | - |
| IB283_RS23760 () | 15535..16242 | - | 708 | WP_000108796.1 | hypothetical protein | - |
| IB283_RS23765 () | 16244..16996 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| IB283_RS23770 () | 17014..17415 | - | 402 | WP_000717860.1 | hypothetical protein | - |
| IB283_RS23775 () | 17784..18125 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| IB283_RS23780 () | 18122..22435 | + | 4314 | WP_096089560.1 | relaxase | - |
| IB283_RS23785 () | 22656..24281 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| IB283_RS23790 () | 24353..25126 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| IB283_RS23795 () | 25085..25525 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| IB283_RS23800 () | 25871..26077 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| IB283_RS23805 () | 26146..28311 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| IB283_RS23810 () | 28316..28891 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| IB283_RS23815 () | 29061..30737 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| IB283_RS23820 () | 30832..31347 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| IB283_RS23825 () | 31394..32047 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| IB283_RS23830 () | 32059..33183 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| IB283_RS23835 () | 33279..33476 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| IB283_RS23840 () | 34019..34348 | - | 330 | WP_001141248.1 | hypothetical protein | - |
| IB283_RS23845 () | 34336..34545 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| IB283_RS23850 () | 34542..35918 | - | 1377 | WP_000750519.1 | hypothetical protein | VF |
| IB283_RS23855 () | 35931..36566 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| IB283_RS23860 () | 36570..37052 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| IB283_RS23865 () | 37118..37675 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| IB283_RS23870 () | 37720..38829 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IB283_RS23875 () | 38820..40358 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| IB283_RS23880 () | 40383..40877 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| IB283_RS23885 () | 40861..42183 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| IB283_RS23890 () | 42222..43865 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| IB283_RS23895 () | 43858..44400 | - | 543 | WP_001220544.1 | sigma 54-interacting transcriptional regulator | - |
| IB283_RS23900 () | 44447..46405 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| IB283_RS23905 () | 46421..47476 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| IB283_RS23910 () | 47495..48634 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| IB283_RS23915 () | 48624..49325 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| IB283_RS23920 () | 49391..50125 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| IB283_RS23925 () | 50291..52648 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| IB283_RS23930 () | 52654..52974 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| IB283_RS23935 () | 53045..53233 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| IB283_RS23940 () | 53335..53919 | - | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| IB283_RS23945 () | 53940..54338 | - | 399 | WP_001708012.1 | hypothetical protein | - |
| IB283_RS23950 () | 54678..55115 | - | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| IB283_RS23955 () | 55121..56356 | - | 1236 | WP_001419735.1 | hypothetical protein | VF |
| IB283_RS23960 () | 56359..56658 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| IB283_RS23965 () | 56725..57357 | - | 633 | WP_001419736.1 | hypothetical protein | - |
| IB283_RS23970 () | 57405..58214 | + | 810 | WP_001419737.1 | hypothetical protein | - |
| IB283_RS23975 () | 58261..58497 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| IB283_RS23980 () | 58501..59148 | - | 648 | WP_001419738.1 | hypothetical protein | VF |
| IB283_RS23985 () | 59154..60140 | - | 987 | WP_001419739.1 | type IV secretion system protein | - |
| IB283_RS23990 () | 60144..60401 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| IB283_RS23995 () | 60398..60700 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| IB283_RS24000 () | 60716..60931 | - | 216 | WP_001360344.1 | hypothetical protein | - |
| IB283_RS24005 () | 61115..61777 | - | 663 | WP_001419740.1 | hypothetical protein | - |
| IB283_RS24010 () | 61837..63050 | + | 1214 | WP_162992105.1 | IS3 family transposase IS629 | Transposase |
| IB283_RS24015 () | 63101..63271 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| IB283_RS24020 () | 63275..63718 | - | 444 | WP_188322780.1 | NfeD family protein | - |
| IB283_RS24025 () | 63791..64744 | - | 954 | WP_072105959.1 | SPFH/Band 7/PHB domain protein | - |
| IB283_RS24030 () | 64790..64984 | - | 195 | WP_000049865.1 | DUF1187 family protein | - |
| IB283_RS24035 () | 64977..65483 | - | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|