MGE detailed information
MGE type: Prophage MGE length: 48758 bp
Accession: NZ_CP061185 Location: 2150271..2199028 Organism: Escherichia coli strain LD67-1 Replicon: chromosome
Accession: NZ_CP061185 Location: 2150271..2199028 Organism: Escherichia coli strain LD67-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IB283_RS09950 () | 2146321..2147304 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| IB283_RS09955 () | 2147579..2147752 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| IB283_RS09960 () | 2147782..2149155 | + | 1374 | WP_022645642.1 | ATP-dependent RNA helicase DbpA | - |
| IB283_RS09965 () | 2149284..2150219 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| IB283_RS09970 () | 2150271..2151506 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| IB283_RS09975 () | 2151508..2151723 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| IB283_RS09980 () | 2151802..2152011 | - | 210 | WP_021565074.1 | double-strand break reduction protein RcbA | - |
| - () | 2151827..2152005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2151827..2152005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2151827..2152005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2151827..2152005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| IB283_RS09985 () | 2152004..2152198 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| IB283_RS09990 () | 2152255..2153064 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| IB283_RS09995 () | 2153057..2155657 | - | 2601 | WP_047667559.1 | exodeoxyribonuclease VIII | - |
| IB283_RS10000 () | 2155759..2156034 | - | 276 | WP_000632297.1 | protein RacC | - |
| IB283_RS10005 () | 2156109..2156279 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| IB283_RS10010 () | 2156279..2156500 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| IB283_RS10015 () | 2156942..2157430 | + | 489 | WP_088845984.1 | superinfection exclusion B family protein | - |
| IB283_RS10020 () | 2157427..2157582 | - | 156 | WP_001610067.1 | DUF1391 family protein | - |
| IB283_RS10025 () | 2158015..2158434 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| IB283_RS10030 () | 2158514..2158749 | + | 236 | Protein_1951 | DNA-binding protein | - |
| IB283_RS10035 () | 2158764..2158955 | + | 192 | WP_188322775.1 | hypothetical protein | - |
| IB283_RS10040 () | 2159197..2159726 | + | 530 | Protein_1953 | DUF1376 domain-containing protein | - |
| IB283_RS10045 () | 2161026..2161247 | - | 222 | WP_188322776.1 | hypothetical protein | - |
| IB283_RS10050 () | 2161283..2161798 | - | 516 | WP_188322777.1 | hypothetical protein | - |
| IB283_RS10055 () | 2162180..2162983 | + | 804 | WP_000801966.1 | hypothetical protein | - |
| IB283_RS10060 () | 2163400..2164437 | + | 1038 | WP_176240419.1 | hypothetical protein | - |
| IB283_RS10065 () | 2165050..2165262 | + | 213 | WP_000882660.1 | type I toxin-antitoxin system Hok family toxin | - |
| IB283_RS10070 () | 2165729..2166328 | + | 600 | WP_000940317.1 | DUF1367 family protein | - |
| IB283_RS10075 () | 2166328..2166618 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| IB283_RS10080 () | 2166615..2167157 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| IB283_RS10085 () | 2168202..2168630 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| IB283_RS10090 () | 2168802..2169176 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| IB283_RS10095 () | 2169428..2169643 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| IB283_RS10100 () | 2169643..2170140 | + | 498 | WP_001351713.1 | lysozyme RrrD | - |
| IB283_RS10105 () | 2170357..2170542 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| IB283_RS10110 () | 2170739..2172196 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| IB283_RS10115 () | 2172334..2173125 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| IB283_RS10120 () | 2173118..2174050 | + | 933 | WP_088845980.1 | hypothetical protein | - |
| IB283_RS10125 () | 2173986..2174237 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| IB283_RS10130 () | 2174241..2175335 | + | 1095 | WP_088845979.1 | terminase small subunit | - |
| IB283_RS10135 () | 2175316..2176617 | + | 1302 | WP_088845978.1 | terminase family protein | - |
| IB283_RS10140 () | 2176620..2178026 | + | 1407 | WP_088845977.1 | DUF4055 domain-containing protein | - |
| IB283_RS10145 () | 2178010..2179122 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| IB283_RS10150 () | 2179227..2179991 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| IB283_RS10155 () | 2180090..2181229 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| IB283_RS10160 () | 2181272..2181448 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| IB283_RS10165 () | 2181452..2181847 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| IB283_RS10170 () | 2181847..2182230 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| IB283_RS10175 () | 2182231..2182611 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| IB283_RS10180 () | 2182608..2183000 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| IB283_RS10185 () | 2183027..2183956 | + | 930 | WP_088845976.1 | hypothetical protein | - |
| IB283_RS10190 () | 2184139..2184498 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| IB283_RS10195 () | 2184972..2188205 | + | 3234 | WP_000840618.1 | phage tail tape measure protein | - |
| IB283_RS10200 () | 2188198..2188536 | + | 339 | WP_000024051.1 | phage tail protein | - |
| IB283_RS10205 () | 2188536..2189234 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| IB283_RS10210 () | 2189240..2189983 | + | 744 | WP_001396591.1 | C40 family peptidase | - |
| IB283_RS10215 () | 2189881..2190528 | + | 648 | WP_088845975.1 | tail assembly protein | - |
| IB283_RS10220 () | 2190589..2194071 | + | 3483 | WP_047667557.1 | host specificity protein J | - |
| IB283_RS10225 () | 2194138..2194737 | + | 600 | WP_047667556.1 | Outer membrane protein X | VF |
| IB283_RS10230 () | 2194802..2197765 | + | 2964 | WP_088845974.1 | phage tail protein | - |
| IB283_RS10235 () | 2197765..2198340 | + | 576 | WP_047667553.1 | tail fiber assembly protein | - |
| IB283_RS10240 () | 2198438..2199028 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IB283_RS10245 () | 2199345..2199578 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IB283_RS10250 () | 2199647..2199760 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IB283_RS10255 () | 2200100..2200273 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| IB283_RS10260 () | 2200538..2200972 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| IB283_RS10265 () | 2201113..2202246 | - | 1134 | WP_000837933.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|