MGE detailed information
MGE type: Genomic_island MGE length: 80334 bp
Accession: NZ_CP061108 Location: 4259013..4339346 Organism: Escherichia coli strain 1EC187 Replicon: chromosome
Accession: NZ_CP061108 Location: 4259013..4339346 Organism: Escherichia coli strain 1EC187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBZ91_RS20345 () | 4254489..4254827 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| IBZ91_RS20350 () | 4254803..4256500 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| IBZ91_RS20355 () | 4256537..4257112 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| IBZ91_RS20365 () | 4257492..4258757 | + | 1266 | WP_060503865.1 | integrase arm-type DNA-binding domain-containing protein | - |
| IBZ91_RS20370 () | 4259013..4260056 | + | 1044 | WP_000147021.1 | hypothetical protein | - |
| IBZ91_RS20375 () | 4260416..4261918 | - | 1503 | WP_021527160.1 | phosphoethanolamine transferase | - |
| IBZ91_RS20380 () | 4262100..4262840 | - | 741 | WP_001045028.1 | porin family protein | - |
| IBZ91_RS20385 () | 4263058..4263426 | - | 369 | WP_001275823.1 | hypothetical protein | - |
| IBZ91_RS20390 () | 4264061..4264807 | - | 747 | WP_053906593.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| IBZ91_RS20395 () | 4264822..4266363 | - | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| IBZ91_RS20400 () | 4266791..4267090 | + | 300 | WP_001196836.1 | hypothetical protein | - |
| IBZ91_RS20405 () | 4267575..4268126 | - | 552 | WP_001447126.1 | MarR family transcriptional regulator | - |
| IBZ91_RS20410 () | 4268389..4269396 | - | 1008 | WP_021542742.1 | P fimbria tip G-adhesin PapG-III | - |
| IBZ91_RS20415 () | 4269440..4269943 | - | 504 | WP_000620430.1 | P fimbrial tip protein PapF | - |
| IBZ91_RS20420 () | 4270019..4270540 | - | 522 | WP_021546363.1 | P fimbrial minor subunit PapE | - |
| IBZ91_RS20425 () | 4270567..4271103 | - | 537 | WP_000597712.1 | type 1 fimbrial protein | - |
| IBZ91_RS20430 () | 4271113..4271694 | - | 582 | WP_000261297.1 | protein papJ | - |
| IBZ91_RS20435 () | 4271731..4272465 | - | 735 | WP_000265730.1 | fimbria/pilus periplasmic chaperone | - |
| IBZ91_RS20440 () | 4272536..4275046 | - | 2511 | WP_000654940.1 | P fimbrial usher protein PapC | - |
| IBZ91_RS20445 () | 4275105..4275692 | - | 588 | WP_021520454.1 | P fimbrial minor subunit PapH | - |
| IBZ91_RS20450 () | 4275756..4276301 | - | 546 | WP_021542655.1 | P fimbria major subunit PapA | - |
| IBZ91_RS20455 () | 4276508..4276822 | - | 315 | WP_000930062.1 | major pilus subunit operon regulatory protein PapB | - |
| IBZ91_RS20460 () | 4277227..4277460 | + | 234 | WP_060503894.1 | major pilus subunit operon transcriptional regulator PapI | - |
| IBZ91_RS20465 () | 4277963..4278331 | + | 369 | WP_000841005.1 | hypothetical protein | - |
| IBZ91_RS20470 () | 4278470..4278679 | + | 210 | WP_001298030.1 | hypothetical protein | - |
| IBZ91_RS20475 () | 4278900..4279073 | + | 174 | Protein_4002 | transposase domain-containing protein | - |
| IBZ91_RS20480 () | 4279381..4279857 | - | 477 | WP_000905436.1 | hypothetical protein | - |
| IBZ91_RS20485 () | 4279920..4280126 | - | 207 | WP_000935974.1 | hypothetical protein | - |
| IBZ91_RS20490 () | 4281221..4282300 | - | 1080 | WP_000821052.1 | type 1 fimbrial protein | - |
| IBZ91_RS20495 () | 4282297..4284831 | - | 2535 | WP_060503898.1 | fimbrial biogenesis outer membrane usher protein | - |
| IBZ91_RS20500 () | 4284839..4285564 | - | 726 | WP_000943625.1 | fimbria/pilus periplasmic chaperone | - |
| IBZ91_RS20505 () | 4285622..4286173 | - | 552 | WP_000695741.1 | fimbrial protein F17 | - |
| IBZ91_RS20510 () | 4286749..4287147 | - | 399 | WP_001546397.1 | DoxX family protein | - |
| IBZ91_RS20515 () | 4287174..4288391 | - | 1218 | WP_001131386.1 | alpha-hydroxy-acid oxidizing protein | - |
| IBZ91_RS20520 () | 4288442..4288990 | - | 549 | WP_000680150.1 | nuclear transport factor 2 family protein | - |
| IBZ91_RS20525 () | 4289160..4289801 | + | 642 | WP_001114734.1 | TetR/AcrR family transcriptional regulator | - |
| IBZ91_RS20530 () | 4290657..4292270 | - | 1614 | WP_001468476.1 | IS66 family transposase | - |
| IBZ91_RS20535 () | 4292301..4292651 | - | 351 | WP_000624651.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IBZ91_RS20540 () | 4292648..4293073 | - | 426 | WP_000435653.1 | IS66 family insertion sequence hypothetical protein | - |
| IBZ91_RS20545 () | 4293413..4294260 | - | 848 | Protein_4016 | IS3 family transposase | - |
| IBZ91_RS20550 () | 4294324..4294942 | + | 619 | Protein_4017 | helix-turn-helix domain-containing protein | - |
| IBZ91_RS20555 () | 4295180..4298224 | - | 3045 | WP_000528124.1 | cytotoxic necrotizing factor CNF1 | - |
| IBZ91_RS20560 () | 4298502..4298729 | - | 228 | WP_000509949.1 | urea transporter | - |
| IBZ91_RS20565 () | 4299170..4300606 | - | 1437 | WP_000860473.1 | alpha-hemolysin T1SS ABC transporter subunit HlyD | - |
| IBZ91_RS20570 () | 4300625..4302748 | - | 2124 | WP_000376543.1 | type I secretion system permease/ATPase | - |
| IBZ91_RS20575 () | 4302819..4305893 | - | 3075 | WP_001142370.1 | RTX toxin hemolysin HlyA | - |
| IBZ91_RS20580 () | 4305905..4306417 | - | 513 | WP_001535080.1 | alpha-hemolysin-activating lysine-acyltransferase HlyC | - |
| IBZ91_RS20585 () | 4307601..4307843 | - | 243 | WP_000789528.1 | hypothetical protein | - |
| IBZ91_RS20590 () | 4307915..4309077 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| IBZ91_RS20595 () | 4309132..4309902 | - | 771 | WP_000730195.1 | molybdopterin-dependent oxidoreductase | - |
| IBZ91_RS20600 () | 4309902..4310500 | - | 599 | Protein_4027 | cytochrome b/b6 domain-containing protein | - |
| IBZ91_RS20605 () | 4310642..4311361 | + | 720 | WP_001066997.1 | response regulator transcription factor | - |
| IBZ91_RS20610 () | 4311362..4312834 | + | 1473 | WP_000995843.1 | HAMP domain-containing histidine kinase | - |
| IBZ91_RS20615 () | 4312914..4314083 | - | 1170 | Protein_4030 | IS3 family transposase | - |
| IBZ91_RS20620 () | 4314157..4314408 | - | 252 | Protein_4031 | IS66 family insertion sequence element accessory protein TnpB | - |
| IBZ91_RS20625 () | 4315059..4316642 | - | 1584 | WP_001332775.1 | hypothetical protein | - |
| IBZ91_RS20630 () | 4316740..4319700 | - | 2961 | WP_001063091.1 | ATP-binding protein | - |
| IBZ91_RS20635 () | 4319705..4320751 | - | 1047 | WP_000635307.1 | DNA cytosine methyltransferase | - |
| IBZ91_RS20640 () | 4321132..4321647 | - | 516 | Protein_4035 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| IBZ91_RS20645 () | 4322009..4322473 | - | 465 | Protein_4036 | type VI secretion protein ImpA | - |
| IBZ91_RS20650 () | 4322646..4322963 | - | 318 | Protein_4037 | transposase | - |
| IBZ91_RS20655 () | 4323054..4323440 | - | 387 | WP_000631802.1 | toxin-immunity protein system imunity protein CdiI | - |
| IBZ91_RS20660 () | 4323437..4325392 | - | 1956 | Protein_4039 | VENN motif pre-toxin domain-containing protein | - |
| IBZ91_RS20665 () | 4325387..4325599 | + | 213 | Protein_4040 | DUF932 domain-containing protein | - |
| IBZ91_RS20670 () | 4325690..4326175 | + | 486 | WP_000213697.1 | antirestriction protein | - |
| IBZ91_RS20675 () | 4326190..4326666 | + | 477 | WP_001298074.1 | RadC family protein | - |
| IBZ91_RS20680 () | 4326753..4326974 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| IBZ91_RS20685 () | 4327054..4327422 | + | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IBZ91_RS20690 () | 4327512..4327886 | + | 375 | WP_001468432.1 | TA system toxin CbtA family protein | Toxin Detail |
| IBZ91_RS20695 () | 4327883..4328371 | + | 489 | WP_000777545.1 | hypothetical protein | - |
| IBZ91_RS20700 () | 4328383..4328580 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| IBZ91_RS20705 () | 4328677..4329246 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| IBZ91_RS20710 () | 4329995..4331533 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| IBZ91_RS20715 () | 4331899..4333233 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| IBZ91_RS20720 () | 4333313..4335460 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| IBZ91_RS20725 () | 4335519..4336976 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| IBZ91_RS20730 () | 4337213..4338730 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| IBZ91_RS20735 () | 4338849..4339022 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| IBZ91_RS20740 () | 4339050..4339346 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| IBZ91_RS20745 () | 4339573..4339845 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| IBZ91_RS20750 () | 4339857..4340087 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| IBZ91_RS20755 () | 4340268..4341899 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| IBZ91_RS20760 () | 4341896..4342615 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|