MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59993 bp
Accession: NZ_CP061097 Location: 1..59993 Organism: Roseomonas marmotae strain 1318 Replicon: plasmid p1318-6
Accession: NZ_CP061097 Location: 1..59993 Organism: Roseomonas marmotae strain 1318 Replicon: plasmid p1318-6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAI58_RS22285 (IAI58_22270) | 150..386 | + | 237 | WP_207451032.1 | hypothetical protein | - |
| IAI58_RS22290 (IAI58_22275) | 999..1880 | + | 882 | WP_207451048.1 | amidohydrolase family protein | - |
| IAI58_RS22295 (IAI58_22280) | 1997..2347 | + | 351 | WP_207451030.1 | IS5 family transposase ISSsp126 | Transposase |
| IAI58_RS22300 (IAI58_22285) | 2347..5148 | + | 2802 | WP_207451028.1 | DUF3578 domain-containing protein | - |
| IAI58_RS22305 (IAI58_22290) | 5162..6262 | + | 1101 | WP_207451026.1 | hypothetical protein | - |
| IAI58_RS22310 (IAI58_22295) | 6479..7939 | - | 1461 | WP_208776339.1 | tripartite tricarboxylate transporter substrate-binding protein | - |
| IAI58_RS22320 (IAI58_22305) | 8618..9400 | + | 783 | WP_207451523.1 | MBL fold metallo-hydrolase | - |
| IAI58_RS22325 (IAI58_22310) | 9428..10360 | + | 933 | WP_208776340.1 | hypothetical protein | - |
| IAI58_RS22330 (IAI58_22315) | 10417..11769 | - | 1353 | WP_207451553.1 | transposase | - |
| IAI58_RS23195 | 11863..12015 | + | 153 | Protein_9 | IS5/IS1182 family transposase | - |
| IAI58_RS22335 (IAI58_22320) | 12057..12956 | - | 900 | WP_237182710.1 | DNA repair protein RadC | - |
| IAI58_RS22340 (IAI58_22325) | 13079..13756 | + | 678 | WP_207451284.1 | thermonuclease family protein | - |
| IAI58_RS22345 (IAI58_22330) | 13949..14968 | + | 1020 | WP_207451279.1 | HNH endonuclease domain-containing protein | - |
| IAI58_RS22350 (IAI58_22335) | 14961..15605 | + | 645 | WP_207451277.1 | class I SAM-dependent methyltransferase | - |
| IAI58_RS22355 (IAI58_22340) | 15938..16141 | + | 204 | WP_207451275.1 | cold-shock protein | - |
| IAI58_RS22360 (IAI58_22345) | 16414..18609 | - | 2196 | WP_208776341.1 | helix-turn-helix domain-containing protein | - |
| IAI58_RS22365 (IAI58_22350) | 19452..20285 | - | 834 | WP_207451271.1 | HNH endonuclease signature motif containing protein | - |
| IAI58_RS22370 (IAI58_22355) | 20381..20485 | + | 105 | WP_207451269.1 | excalibur calcium-binding domain-containing protein | - |
| IAI58_RS22375 (IAI58_22360) | 20545..21459 | + | 915 | WP_207451563.1 | 3'-5' exonuclease | - |
| IAI58_RS22380 (IAI58_22365) | 21556..21774 | + | 219 | WP_207451571.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| IAI58_RS22385 (IAI58_22370) | 21761..22111 | + | 351 | WP_207451561.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| IAI58_RS22390 (IAI58_22375) | 22794..22964 | + | 171 | WP_208776343.1 | hypothetical protein | - |
| IAI58_RS22395 (IAI58_22380) | 23147..25927 | + | 2781 | WP_208776344.1 | virulence-associated E family protein | - |
| IAI58_RS22400 (IAI58_22385) | 26928..28004 | + | 1077 | WP_207450817.1 | IS5 family transposase ISSsp126 | Transposase |
| IAI58_RS22405 (IAI58_22390) | 28290..28889 | - | 600 | WP_207450815.1 | XRE family transcriptional regulator | - |
| IAI58_RS22410 (IAI58_22395) | 29019..30326 | + | 1308 | WP_207450813.1 | FAD-binding oxidoreductase | - |
| IAI58_RS22415 (IAI58_22400) | 30491..32722 | - | 2232 | WP_207450811.1 | N,N-dimethylformamidase | - |
| IAI58_RS22420 (IAI58_22405) | 32743..33054 | - | 312 | WP_207450809.1 | hypothetical protein | - |
| IAI58_RS22425 (IAI58_22410) | 33056..34114 | - | 1059 | WP_207450807.1 | extracellular solute-binding protein | - |
| IAI58_RS22430 (IAI58_22415) | 34171..34944 | - | 774 | WP_237182987.1 | ABC transporter permease subunit | - |
| IAI58_RS22435 (IAI58_22420) | 34977..35753 | - | 777 | WP_208776346.1 | ABC transporter permease | - |
| IAI58_RS22440 (IAI58_22425) | 35786..36805 | - | 1020 | WP_207450801.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| IAI58_RS23200 | 37251..37496 | - | 246 | Protein_32 | hypothetical protein | - |
| IAI58_RS22450 (IAI58_22435) | 37635..38576 | + | 942 | WP_207450797.1 | IS5 family transposase ISAtu2 | Transposase |
| IAI58_RS22455 (IAI58_22440) | 39004..39645 | + | 642 | Protein_34 | IS6 family transposase ISRssp3 | Transposase |
| IAI58_RS22460 (IAI58_22445) | 39711..40022 | + | 312 | WP_207450795.1 | hypothetical protein | - |
| IAI58_RS22465 (IAI58_22450) | 40277..40951 | + | 675 | WP_207450793.1 | IS1182 family transposase ISMno9 | Transposase |
| IAI58_RS22470 (IAI58_22455) | 40959..41186 | - | 228 | WP_272877199.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| IAI58_RS22475 (IAI58_22460) | 41324..41725 | + | 402 | WP_207451415.1 | IS66 family transposase ISAzs21 | Transposase |
| IAI58_RS23360 | 41722..42027 | + | 306 | Protein_39 | IS66 family transposase ISNisp6 | Transposase |
| IAI58_RS22480 (IAI58_22465) | 42151..43644 | + | 1494 | WP_207451430.1 | IS66 family transposase ISNisp6 | Transposase |
| IAI58_RS22485 (IAI58_22470) | 44013..44246 | + | 234 | Protein_41 | transposase | - |
| IAI58_RS22490 (IAI58_22475) | 44386..45051 | + | 666 | WP_207450782.1 | glutathione S-transferase family protein | - |
| IAI58_RS22495 (IAI58_22480) | 45460..46812 | + | 1353 | WP_207451553.1 | transposase | - |
| IAI58_RS22500 (IAI58_22485) | 46849..47670 | - | 822 | WP_208776004.1 | IS5 family transposase IS12528 | Transposase |
| IAI58_RS22505 (IAI58_22490) | 48156..48815 | + | 660 | WP_207451542.1 | hypothetical protein | - |
| IAI58_RS22510 (IAI58_22495) | 49104..49397 | - | 294 | WP_207451541.1 | hypothetical protein | - |
| IAI58_RS22515 (IAI58_22500) | 49793..50083 | + | 291 | WP_207451046.1 | hypothetical protein | - |
| IAI58_RS22520 (IAI58_22505) | 50292..50858 | - | 567 | WP_207451044.1 | hypothetical protein | - |
| IAI58_RS22525 (IAI58_22510) | 51226..51924 | + | 699 | WP_207451042.1 | ParA family protein | - |
| IAI58_RS22530 (IAI58_22515) | 52816..53352 | + | 537 | WP_207451039.1 | NYN domain-containing protein | - |
| IAI58_RS22535 (IAI58_22520) | 53708..54928 | + | 1221 | WP_207451421.1 | IS256 family transposase ISSpwi2 | Transposase |
| IAI58_RS22540 (IAI58_22525) | 54962..56245 | + | 1284 | WP_237182988.1 | sorbosone dehydrogenase family protein | - |
| IAI58_RS22545 (IAI58_22530) | 56534..57625 | - | 1092 | WP_207451038.1 | SMP-30/gluconolactonase/LRE family protein | - |
| IAI58_RS22550 (IAI58_22535) | 58166..59344 | + | 1179 | WP_207451036.1 | serine hydrolase | - |
| IAI58_RS22555 (IAI58_22540) | 59658..59846 | - | 189 | WP_207451034.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|