MGE detailed information
MGE type: Conjugative plasmid MGE length: 105686 bp
Accession: NZ_CP060989 Location: 1..105686 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-3
Accession: NZ_CP060989 Location: 1..105686 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9212_RS25040 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| H9212_RS25045 (1986) | 1986..2942 | + | 957 | WP_001535695.1 | hypothetical protein | - |
| H9212_RS25050 (2854) | 2854..5820 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9212_RS25055 (5906) | 5906..6610 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS25060 (6616) | 6616..7362 | + | 747 | WP_071448054.1 | winged helix-turn-helix domain-containing protein | - |
| H9212_RS25065 (7362) | 7362..7880 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| H9212_RS25070 (7885) | 7885..8301 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| H9212_RS25075 (8561) | 8561..8878 | - | 318 | Protein_7 | IS5/IS1182 family transposase | - |
| H9212_RS25080 (8913) | 8913..9788 | - | 876 | WP_241407884.1 | Beta-lactamase Toho-1 | ARG |
| H9212_RS25085 (10091) | 10091..10795 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9212_RS25090 (10820) | 10820..11534 | + | 715 | Protein_10 | DUF3363 domain-containing protein | - |
| H9212_RS25095 (11751) | 11751..12965 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| H9212_RS25100 (12993) | 12993..13298 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| H9212_RS25105 (13410) | 13410..14903 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| H9212_RS25110 (15139) | 15139..15381 | - | 243 | Protein_14 | phosphoglucosamine mutase | - |
| H9212_RS25115 (15468) | 15468..16283 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| H9212_RS25120 (16613) | 16613..16699 | + | 87 | Protein_16 | Arm DNA-binding domain-containing protein | - |
| H9212_RS25125 (16971) | 16971..17726 | - | 756 | Protein_17 | IS110 family transposase IS5075 | Transposase |
| H9212_RS25130 (17779) | 17779..18483 | - | 705 | WP_001067855.1 | Aerotaxis receptor | VF |
| H9212_RS25135 (18508) | 18508..20064 | + | 1557 | WP_053897648.1 | Aerotaxis receptor | VF |
| H9212_RS25140 (20475) | 20475..21092 | - | 618 | WP_001535718.1 | ProQ/FINO family protein | - |
| H9212_RS25145 (21287) | 21287..22843 | - | 1557 | WP_000818359.1 | AAA family ATPase | - |
| H9212_RS25150 (23108) | 23108..23698 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| H9212_RS25155 (23698) | 23698..23955 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| H9212_RS25160 (24284) | 24284..25387 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| H9212_RS25165 (25417) | 25417..26547 | + | 1131 | WP_000542418.1 | DUF4238 domain-containing protein | - |
| H9212_RS25170 (26547) | 26547..26846 | + | 300 | WP_241407885.1 | korC | - |
| H9212_RS25175 (27646) | 27646..28059 | + | 414 | WP_001535716.1 | hypothetical protein | - |
| H9212_RS25180 (28061) | 28061..28840 | + | 780 | WP_001535715.1 | site-specific integrase | - |
| H9212_RS25185 (29020) | 29020..29664 | + | 645 | WP_001144036.1 | ParA family protein | - |
| H9212_RS25190 (29751) | 29751..30059 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| H9212_RS25195 (30472) | 30472..31452 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| H9212_RS25200 (31445) | 31445..31861 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| H9212_RS25205 (31863) | 31863..33137 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| H9212_RS25210 (33137) | 33137..33574 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9212_RS25215 (33571) | 33571..33819 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| H9212_RS25220 (34237) | 34237..35139 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| H9212_RS25225 (35136) | 35136..35447 | + | 312 | WP_162721889.1 | hypothetical protein | - |
| H9212_RS25230 (35523) | 35523..36206 | + | 684 | WP_000086148.1 | DNA methylase | - |
| H9212_RS25235 (36207) | 36207..36428 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| H9212_RS25240 (36358) | 36358..36876 | + | 519 | WP_224732897.1 | DUF1380 family protein | - |
| H9212_RS25245 (36927) | 36927..37703 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| H9212_RS25250 (38121) | 38121..38546 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| H9212_RS25255 (38593) | 38593..39015 | + | 423 | WP_001535711.1 | DUF1380 family protein | - |
| H9212_RS25260 (39012) | 39012..39203 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| H9212_RS25265 (39537) | 39537..39605 | - | 69 | Protein_45 | pilus protein | - |
| H9212_RS25270 (39974) | 39974..40501 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| H9212_RS25275 (40559) | 40559..40792 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| H9212_RS25280 (40851) | 40851..42809 | + | 1959 | WP_023231917.1 | ParB/RepB/Spo0J family partition protein | - |
| H9212_RS25285 (42864) | 42864..43298 | + | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| H9212_RS25290 (43295) | 43295..44014 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| H9212_RS25295 (44011) | 44011..44607 | + | 597 | WP_001535708.1 | hypothetical protein | - |
| H9212_RS25300 (45070) | 45070..45570 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| H9212_RS25305 (46299) | 46299..46733 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H9212_RS25310 (46825) | 46825..47091 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H9212_RS25315 (47156) | 47156..48106 | + | 951 | WP_089477347.1 | Recombination-promoting nuclease RpnA | VF |
| H9212_RS25320 (48106) | 48106..48351 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| H9212_RS25325 (48382) | 48382..48633 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| H9212_RS25330 (49213) | 49213..50061 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| H9212_RS25335 (50147) | 50147..50482 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9212_RS25340 (50716) | 50716..51048 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9212_RS25345 (51059) | 51059..53761 | + | 2703 | WP_001493820.1 | Protein TraI | Relaxase |
| H9212_RS25350 (53884) | 53884..54702 | + | 819 | WP_000106196.1 | DUF2971 domain-containing protein | - |
| H9212_RS25355 (54775) | 54775..57066 | - | 2292 | WP_001289272.1 | F-type conjugative transfer protein TrbC | - |
| H9212_RS25360 (57059) | 57059..58129 | - | 1071 | WP_001535705.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9212_RS25365 (58148) | 58148..59356 | - | 1209 | WP_001535704.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (59536) | 59536..59593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59536) | 59536..59593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59536) | 59536..59593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59536) | 59536..59593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| H9212_RS25370 (59648) | 59648..59800 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| H9212_RS25375 (59872) | 59872..60123 | - | 252 | WP_001535703.1 | hypothetical protein | - |
| H9212_RS26200 (60624) | 60624..60719 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| H9212_RS25385 (60784) | 60784..60960 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| H9212_RS25390 (61169) | 61169..61378 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| H9212_RS25395 (61476) | 61476..62090 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9212_RS25400 (62166) | 62166..64334 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| H9212_RS25405 (64431) | 64431..65015 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| H9212_RS25410 (65044) | 65044..66246 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| H9212_RS25415 (66213) | 66213..66827 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| H9212_RS25420 (66827) | 66827..69871 | - | 3045 | WP_226101255.1 | IncI1-type conjugal transfer protein TraU | - |
| H9212_RS25425 (69961) | 69961..70761 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H9212_RS25430 (70745) | 70745..70933 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9212_RS25435 (70997) | 70997..71401 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| H9212_RS25440 (71452) | 71452..71979 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9212_RS25445 (71979) | 71979..72683 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| H9212_RS25450 (72683) | 72683..73972 | - | 1290 | WP_001535701.1 | conjugal transfer protein TraO | - |
| H9212_RS25455 (73975) | 73975..74958 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| H9212_RS25460 (74969) | 74969..75661 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9212_RS25465 (75658) | 75658..76005 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9212_RS25470 (76023) | 76023..79790 | - | 3768 | WP_001141542.1 | DUF5710 domain-containing protein | - |
| H9212_RS25475 (79880) | 79880..80431 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| H9212_RS25480 (80446) | 80446..80736 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| H9212_RS25485 (80733) | 80733..81881 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| H9212_RS25490 (81878) | 81878..82696 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| H9212_RS25495 (82693) | 82693..83151 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9212_RS25500 (83546) | 83546..84130 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| H9212_RS25505 (84190) | 84190..85392 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| H9212_RS25510 (85477) | 85477..86301 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| H9212_RS25515 (86452) | 86452..87606 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| H9212_RS25520 (89127) | 89127..89375 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| H9212_RS25525 (89372) | 89372..90664 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| H9212_RS25530 (90664) | 90664..91320 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| H9212_RS25535 (91305) | 91305..91865 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| H9212_RS25540 (91875) | 91875..92489 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| H9212_RS25545 (92507) | 92507..93604 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9212_RS25550 (93617) | 93617..95170 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9212_RS25555 (95181) | 95181..95633 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| H9212_RS25560 (95620) | 95620..96915 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| H9212_RS25565 (96908) | 96908..98590 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9212_RS25570 (98604) | 98604..99041 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| H9212_RS25575 (99041) | 99041..100108 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| H9212_RS25580 (100782) | 100782..101234 | - | 453 | WP_001535696.1 | hypothetical protein | - |
| H9212_RS25585 (101277) | 101277..101531 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| H9212_RS25590 (101799) | 101799..102365 | - | 567 | WP_000776428.1 | protein TraD | - |
| H9212_RS25595 (102379) | 102379..103062 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| H9212_RS25600 (103316) | 103316..103849 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| H9212_RS25605 (104291) | 104291..104578 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9212_RS25610 (104496) | 104496..104726 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|