MGE detailed information
MGE type: Conjugative plasmid MGE length: 106787 bp
Accession: NZ_CP060981 Location: 1..106787 Organism: Escherichia coli strain EC3 Replicon: plasmid pEC3-3
Accession: NZ_CP060981 Location: 1..106787 Organism: Escherichia coli strain EC3 Replicon: plasmid pEC3-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9191_RS23655 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| H9191_RS23660 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| H9191_RS23665 (1986) | 1986..2255 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| H9191_RS23670 (2255) | 2255..2533 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| H9191_RS23675 (2573) | 2573..3421 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| H9191_RS23680 (3538) | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| H9191_RS23685 (4488) | 4488..4754 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| H9191_RS23690 (4754) | 4754..5248 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| H9191_RS23695 (5304) | 5304..5906 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| H9191_RS23705 (7129) | 7129..8328 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| H9191_RS23710 (8338) | 8338..8526 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| H9191_RS23715 (8615) | 8615..9736 | - | 1122 | WP_241468325.1 | DUF3883 domain-containing protein | - |
| H9191_RS23720 (9787) | 9787..10014 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| H9191_RS23725 (10038) | 10038..10229 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| H9191_RS23730 (10711) | 10711..11253 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| H9191_RS23735 (11266) | 11266..12126 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| H9191_RS23740 (12269) | 12269..13114 | + | 846 | Protein_17 | IS4 family transposase IS10R | Transposase |
| H9191_RS23745 (13180) | 13180..13884 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9191_RS23750 (13935) | 13935..14918 | - | 984 | Protein_19 | TonB-dependent receptor | - |
| H9191_RS23755 (14975) | 14975..15943 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| H9191_RS23760 (15978) | 15978..16853 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| H9191_RS23765 (17103) | 17103..18365 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H9191_RS23770 (18596) | 18596..19597 | + | 1002 | WP_139003267.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| H9191_RS23775 (19786) | 19786..20202 | - | 417 | Protein_24 | DNA-binding protein | - |
| H9191_RS23780 (20233) | 20233..20805 | - | 573 | WP_001568017.1 | hypothetical protein | - |
| H9191_RS23785 (20802) | 20802..21050 | - | 249 | WP_001568018.1 | hypothetical protein | - |
| H9191_RS23790 (21496) | 21496..23223 | + | 1728 | WP_001568019.1 | ATP-binding protein | - |
| H9191_RS23795 (23220) | 23220..24635 | + | 1416 | WP_001568020.1 | AAA family ATPase | - |
| H9191_RS23800 (25235) | 25235..28039 | + | 2805 | WP_001568022.1 | hypothetical protein | - |
| H9191_RS23805 (28184) | 28184..29212 | - | 1029 | WP_001568023.1 | Abi family protein | - |
| H9191_RS23810 (29353) | 29353..29955 | - | 603 | WP_001568024.1 | hypothetical protein | - |
| H9191_RS23815 (30477) | 30477..30890 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| H9191_RS23820 (30892) | 30892..31671 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| H9191_RS23825 (31851) | 31851..32495 | + | 645 | WP_001144036.1 | ParA family protein | - |
| H9191_RS23830 (32582) | 32582..32887 | + | 306 | WP_021577244.1 | hypothetical protein | - |
| H9191_RS23835 (33304) | 33304..34284 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| H9191_RS23840 (34277) | 34277..34693 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| H9191_RS23845 (34695) | 34695..35969 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| H9191_RS23850 (35969) | 35969..36406 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9191_RS23855 (36403) | 36403..36651 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9191_RS23860 (37069) | 37069..37971 | + | 903 | WP_072748703.1 | DUF1281 domain-containing protein | - |
| H9191_RS23865 (37975) | 37975..38280 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| H9191_RS23870 (38356) | 38356..39039 | + | 684 | WP_030003447.1 | DNA methylase | - |
| H9191_RS23875 (39040) | 39040..39261 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| H9191_RS23880 (39242) | 39242..39708 | + | 467 | Protein_45 | DUF1380 family protein | - |
| H9191_RS23885 (39759) | 39759..40529 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| H9191_RS23890 (40946) | 40946..41371 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| H9191_RS23895 (41418) | 41418..41840 | + | 423 | WP_000271734.1 | DUF1380 family protein | - |
| H9191_RS23900 (41837) | 41837..42028 | + | 192 | WP_031942274.1 | hypothetical protein | - |
| H9191_RS23905 (42361) | 42361..42429 | - | 69 | Protein_50 | pilus protein | - |
| H9191_RS23910 (42798) | 42798..43325 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| H9191_RS23915 (43383) | 43383..43616 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| H9191_RS23920 (43680) | 43680..45638 | + | 1959 | WP_031942276.1 | ParB/RepB/Spo0J family partition protein | - |
| H9191_RS23925 (45693) | 45693..46127 | + | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| H9191_RS23930 (46124) | 46124..46843 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| H9191_RS23935 (46840) | 46840..47436 | + | 597 | WP_030003450.1 | hypothetical protein | - |
| H9191_RS23940 (47899) | 47899..48399 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| H9191_RS23945 (49128) | 49128..49562 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H9191_RS23950 (49656) | 49656..49922 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H9191_RS23955 (49987) | 49987..50889 | + | 903 | WP_030003452.1 | Recombination-promoting nuclease RpnA | VF |
| H9191_RS23960 (50889) | 50889..51146 | + | 258 | WP_016231861.1 | hypothetical protein | VF |
| H9191_RS23965 (51177) | 51177..51428 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| H9191_RS23970 (51462) | 51462..51764 | - | 303 | WP_030003453.1 | hypothetical protein | - |
| H9191_RS23975 (52008) | 52008..52856 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| H9191_RS23980 (52941) | 52941..53276 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| H9191_RS23985 (53510) | 53510..53842 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9191_RS23990 (53853) | 53853..56552 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| H9191_RS23995 (56589) | 56589..58880 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| H9191_RS24000 (58873) | 58873..59943 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9191_RS24005 (59962) | 59962..61170 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (61350) | 61350..61412 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (61350) | 61350..61412 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (61350) | 61350..61412 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (61350) | 61350..61412 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| H9191_RS24010 (61462) | 61462..61614 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| H9191_RS24015 (61686) | 61686..61937 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9191_RS25055 (62436) | 62436..62531 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| H9191_RS24025 (62596) | 62596..62772 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| H9191_RS24030 (63164) | 63164..63373 | + | 210 | WP_039025903.1 | HEAT repeat domain-containing protein | - |
| H9191_RS24035 (63445) | 63445..64107 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9191_RS24040 (64178) | 64178..66346 | - | 2169 | WP_000698354.1 | DotA/TraY family protein | - |
| H9191_RS24045 (66443) | 66443..67027 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| H9191_RS24050 (67056) | 67056..68258 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| H9191_RS24055 (68225) | 68225..68839 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| H9191_RS24060 (68839) | 68839..71883 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| H9191_RS24065 (71973) | 71973..72773 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H9191_RS24070 (72757) | 72757..72945 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9191_RS24075 (73009) | 73009..73413 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| H9191_RS24080 (73464) | 73464..73991 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9191_RS24085 (73991) | 73991..74695 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| H9191_RS24090 (74695) | 74695..75984 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| H9191_RS24095 (75987) | 75987..76970 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| H9191_RS24100 (76981) | 76981..77595 | - | 615 | WP_000813799.1 | DotI/IcmL family type IV secretion protein | - |
| H9191_RS24105 (77670) | 77670..78017 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9191_RS24110 (78035) | 78035..81802 | - | 3768 | WP_031942279.1 | DUF5710 domain-containing protein | - |
| H9191_RS24115 (81892) | 81892..82443 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| H9191_RS24120 (82458) | 82458..82748 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| H9191_RS24125 (82745) | 82745..83893 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| H9191_RS24130 (83890) | 83890..84708 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| H9191_RS24135 (84705) | 84705..85163 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9191_RS24140 (85558) | 85558..86142 | - | 585 | WP_031942280.1 | histidine phosphatase family protein | - |
| H9191_RS24145 (86202) | 86202..87404 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| H9191_RS24150 (87489) | 87489..88313 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| H9191_RS24155 (88464) | 88464..89618 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| H9191_RS24160 (90431) | 90431..91765 | - | 1335 | WP_024132209.1 | hypothetical protein | VF |
| H9191_RS24165 (91765) | 91765..92421 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| H9191_RS24170 (92406) | 92406..92966 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| H9191_RS24175 (92976) | 92976..93590 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| H9191_RS24180 (93608) | 93608..94705 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9191_RS24185 (94718) | 94718..96271 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9191_RS24190 (96282) | 96282..96734 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| H9191_RS24195 (96721) | 96721..98016 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| H9191_RS24200 (98009) | 98009..99691 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9191_RS24205 (99705) | 99705..100142 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| H9191_RS24210 (100142) | 100142..101209 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| H9191_RS24215 (101883) | 101883..102335 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| H9191_RS24220 (102378) | 102378..102632 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| H9191_RS24225 (102900) | 102900..103466 | - | 567 | WP_000776428.1 | protein TraD | - |
| H9191_RS24230 (103480) | 103480..104163 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| H9191_RS24235 (104417) | 104417..104950 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| H9191_RS24240 (105392) | 105392..105679 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9191_RS24245 (105597) | 105597..105827 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|