MGE detailed information
MGE type: Prophage MGE length: 40905 bp
Accession: NZ_CP060979 Location: 2258572..2299476 Organism: Escherichia coli strain EC3 Replicon: chromosome
Accession: NZ_CP060979 Location: 2258572..2299476 Organism: Escherichia coli strain EC3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9191_RS11140 (2254471) | 2254471..2255691 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| H9191_RS11145 (2255816) | 2255816..2256511 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| H9191_RS11150 (2256464) | 2256464..2257756 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| H9191_RS11155 (2257915) | 2257915..2258529 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| H9191_RS11160 (2258572) | 2258572..2259426 | - | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| H9191_RS11165 (2259428) | 2259428..2260045 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| H9191_RS11170 (2260056) | 2260056..2262479 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9191_RS11175 (2262540) | 2262540..2264966 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9191_RS11180 (2265165) | 2265165..2265470 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H9191_RS11185 (2265578) | 2265578..2266288 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H9191_RS11190 (2266291) | 2266291..2266851 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H9191_RS11195 (2266886) | 2266886..2267227 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H9191_RS11200 (2267362) | 2267362..2267688 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| H9191_RS11205 (2267894) | 2267894..2269108 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H9191_RS11210 (2269120) | 2269120..2270139 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H9191_RS11215 (2270327) | 2270327..2271607 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| H9191_RS11220 (2271642) | 2271642..2271893 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| H9191_RS11225 (2271966) | 2271966..2273675 | - | 1710 | Protein_2204 | 3'-5' exoribonuclease | - |
| H9191_RS11230 (2273663) | 2273663..2273920 | + | 258 | Protein_2205 | hypothetical protein | - |
| H9191_RS11235 (2273961) | 2273961..2274383 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| H9191_RS11240 (2274380) | 2274380..2274869 | + | 490 | Protein_2207 | class I SAM-dependent methyltransferase | - |
| H9191_RS11245 (2275252) | 2275252..2276791 | - | 1540 | Protein_2208 | IS66 family transposase ISEc22 | Transposase |
| H9191_RS11250 (2276840) | 2276840..2277070 | - | 231 | Protein_2209 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9191_RS11255 (2277076) | 2277076..2277198 | - | 123 | Protein_2210 | IS66 family transposase ISEc22 | Transposase |
| H9191_RS11260 (2277441) | 2277441..2277862 | + | 422 | Protein_2211 | hypothetical protein | - |
| H9191_RS11265 (2278518) | 2278518..2279540 | + | 1023 | Protein_2212 | ISNCY family transposase ISCARN112 | Transposase |
| H9191_RS11270 (2279661) | 2279661..2279810 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| H9191_RS11275 (2280247) | 2280247..2280579 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| H9191_RS11280 (2280782) | 2280782..2281087 | - | 306 | WP_001326990.1 | protein YdfV | - |
| H9191_RS11285 (2281112) | 2281112..2281351 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H9191_RS11290 (2281351) | 2281351..2281638 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H9191_RS11295 (2281710) | 2281710..2281865 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H9191_RS11300 (2282082) | 2282082..2282333 | + | 252 | WP_000980994.1 | protein Rem | - |
| H9191_RS11305 (2282400) | 2282400..2282678 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| H9191_RS11310 (2282680) | 2282680..2283729 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H9191_RS11315 (2283743) | 2283743..2284495 | + | 753 | WP_001047135.1 | antitermination protein | - |
| H9191_RS11320 (2284773) | 2284773..2284862 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| H9191_RS11325 (2284917) | 2284917..2285129 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H9191_RS11330 (2285430) | 2285430..2285645 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H9191_RS11335 (2286009) | 2286009..2286179 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| H9191_RS11340 (2286399) | 2286399..2286614 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H9191_RS11345 (2286619) | 2286619..2286930 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| H9191_RS11350 (2286927) | 2286927..2287460 | + | 534 | WP_001092971.1 | lysozyme | - |
| H9191_RS11355 (2287457) | 2287457..2287954 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H9191_RS11360 (2288317) | 2288317..2288529 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H9191_RS11365 (2288540) | 2288540..2288728 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| H9191_RS11370 (2288731) | 2288731..2288796 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| H9191_RS11375 (2288801) | 2288801..2289031 | + | 231 | WP_000720962.1 | protein YnfN | - |
| H9191_RS11380 (2289203) | 2289203..2289376 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H9191_RS11385 (2289528) | 2289528..2289938 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H9191_RS11390 (2289996) | 2289996..2290229 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H9191_RS11395 (2290618) | 2290618..2291163 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H9191_RS11400 (2291138) | 2291138..2292943 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| H9191_RS11405 (2292943) | 2292943..2293518 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H9191_RS11410 (2293616) | 2293616..2294206 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9191_RS11415 (2294523) | 2294523..2294756 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H9191_RS11420 (2294825) | 2294825..2294938 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| H9191_RS11425 (2295459) | 2295459..2296826 | + | 1368 | Protein_2244 | MHS family MFS transporter | - |
| H9191_RS11430 (2296915) | 2296915..2298375 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H9191_RS11435 (2298410) | 2298410..2298613 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H9191_RS11440 (2298790) | 2298790..2299476 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| H9191_RS11445 (2299565) | 2299565..2300311 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| H9191_RS11450 (2300448) | 2300448..2302493 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| H9191_RS11455 (2302537) | 2302537..2303055 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| H9191_RS11460 (2303331) | 2303331..2303723 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|