MGE detailed information
MGE type: Genomic_island MGE length: 11128 bp
Accession: NZ_CP060974 Location: 4371811..4382938 Organism: Escherichia coli strain EC4 Replicon: chromosome
Accession: NZ_CP060974 Location: 4371811..4382938 Organism: Escherichia coli strain EC4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9192_RS21305 (4367580) | 4367580..4367918 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| H9192_RS21310 (4367894) | 4367894..4369591 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| H9192_RS21315 (4369628) | 4369628..4370203 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| H9192_RS21325 (4371002) | 4371002..4371616 | + | 615 | Protein_4191 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H9192_RS21330 (4371811) | 4371811..4373352 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| H9192_RS21335 (4373367) | 4373367..4374113 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| H9192_RS21340 (4374200) | 4374200..4375126 | + | 927 | Protein_4194 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H9192_RS21345 (4375491) | 4375491..4376825 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| H9192_RS21350 (4376905) | 4376905..4379052 | + | 2148 | WP_072647485.1 | lysine decarboxylase CadA | - |
| H9192_RS21355 (4379111) | 4379111..4380568 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| H9192_RS21360 (4380805) | 4380805..4382322 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| H9192_RS21365 (4382441) | 4382441..4382614 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| H9192_RS21370 (4382642) | 4382642..4382938 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| H9192_RS21375 (4383165) | 4383165..4383437 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| H9192_RS21380 (4383449) | 4383449..4383679 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| H9192_RS21385 (4383860) | 4383860..4385491 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| H9192_RS21390 (4385488) | 4385488..4386207 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |