MGE detailed information
MGE type: Prophage MGE length: 88263 bp
Accession: NZ_CP060974 Location: 2311333..2399595 Organism: Escherichia coli strain EC4 Replicon: chromosome
Accession: NZ_CP060974 Location: 2311333..2399595 Organism: Escherichia coli strain EC4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9192_RS11160 (2307582) | 2307582..2310008 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9192_RS11165 (2310207) | 2310207..2310512 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H9192_RS11170 (2310620) | 2310620..2311330 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H9192_RS11175 (2311333) | 2311333..2311893 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H9192_RS11180 (2311928) | 2311928..2312269 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H9192_RS11185 (2312404) | 2312404..2312730 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| H9192_RS11190 (2312936) | 2312936..2314150 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H9192_RS11195 (2314162) | 2314162..2315181 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H9192_RS11200 (2315282) | 2315282..2315959 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| H9192_RS11205 (2315959) | 2315959..2316306 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| H9192_RS11210 (2316326) | 2316326..2317897 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| H9192_RS11215 (2318076) | 2318076..2319356 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| H9192_RS11220 (2319391) | 2319391..2319642 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| H9192_RS11225 (2319715) | 2319715..2322186 | - | 2472 | WP_025693413.1 | exonuclease | - |
| H9192_RS11230 (2322279) | 2322279..2322470 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| H9192_RS11235 (2322467) | 2322467..2322655 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H9192_RS11240 (2323223) | 2323223..2323441 | - | 219 | WP_001171942.1 | protein YdfC | - |
| H9192_RS24835 (2323471) | 2323471..2323599 | - | 129 | WP_000344964.1 | protein YdfB | - |
| H9192_RS11245 (2323601) | 2323601..2323756 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| H9192_RS11250 (2323923) | 2323923..2324330 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| H9192_RS11255 (2324414) | 2324414..2324644 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| H9192_RS11260 (2324628) | 2324628..2325149 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| H9192_RS11265 (2325130) | 2325130..2326095 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| H9192_RS11270 (2326136) | 2326136..2326558 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| H9192_RS11275 (2326555) | 2326555..2326758 | + | 204 | Protein_2212 | class I SAM-dependent methyltransferase | - |
| H9192_RS11280 (2326909) | 2326909..2327889 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| H9192_RS11285 (2327961) | 2327961..2328243 | + | 283 | Protein_2214 | SAM-dependent methyltransferase | - |
| H9192_RS11290 (2328626) | 2328626..2330165 | - | 1540 | Protein_2215 | IS66 family transposase ISEc22 | Transposase |
| H9192_RS11295 (2330214) | 2330214..2330561 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| H9192_RS11300 (2330558) | 2330558..2330962 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| H9192_RS11305 (2331184) | 2331184..2331605 | + | 422 | Protein_2218 | hypothetical protein | - |
| H9192_RS11310 (2332261) | 2332261..2333283 | + | 1023 | Protein_2219 | ISNCY family transposase ISCARN112 | Transposase |
| H9192_RS11315 (2333404) | 2333404..2333553 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| H9192_RS11320 (2333990) | 2333990..2334322 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| H9192_RS11325 (2334525) | 2334525..2334830 | - | 306 | WP_001326990.1 | protein YdfV | - |
| H9192_RS11330 (2334855) | 2334855..2335094 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H9192_RS11335 (2335094) | 2335094..2335381 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H9192_RS11340 (2335453) | 2335453..2335608 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H9192_RS11345 (2335825) | 2335825..2336076 | + | 252 | WP_000980994.1 | protein Rem | - |
| H9192_RS11350 (2336143) | 2336143..2336421 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| H9192_RS11355 (2336423) | 2336423..2337472 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H9192_RS11360 (2337486) | 2337486..2338238 | + | 753 | WP_001047135.1 | antitermination protein | - |
| H9192_RS11365 (2338516) | 2338516..2338605 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| H9192_RS11370 (2338660) | 2338660..2338872 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H9192_RS11375 (2339032) | 2339032..2340012 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| H9192_RS11380 (2340372) | 2340372..2340587 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H9192_RS11385 (2340951) | 2340951..2341121 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| H9192_RS11390 (2341341) | 2341341..2341550 | + | 210 | WP_032347816.1 | phage lysis protein EssD | - |
| H9192_RS11395 (2341561) | 2341561..2341872 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| H9192_RS11400 (2341869) | 2341869..2342402 | + | 534 | WP_001092971.1 | lysozyme | - |
| H9192_RS11405 (2342399) | 2342399..2342896 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H9192_RS11410 (2343259) | 2343259..2343471 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H9192_RS11415 (2343482) | 2343482..2343670 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| H9192_RS11420 (2343673) | 2343673..2343738 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| H9192_RS11425 (2343743) | 2343743..2343973 | + | 231 | WP_000720962.1 | protein YnfN | - |
| H9192_RS11430 (2344145) | 2344145..2344318 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H9192_RS11435 (2344470) | 2344470..2344880 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H9192_RS11440 (2344938) | 2344938..2345171 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H9192_RS11445 (2345560) | 2345560..2346105 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H9192_RS11450 (2346080) | 2346080..2348005 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| H9192_RS11455 (2348002) | 2348002..2348208 | + | 207 | WP_000198149.1 | gpW family protein | - |
| H9192_RS11460 (2348205) | 2348205..2349806 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| H9192_RS11465 (2349787) | 2349787..2351106 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| H9192_RS11470 (2351116) | 2351116..2351448 | + | 333 | WP_001295978.1 | head decoration protein | - |
| H9192_RS11475 (2351505) | 2351505..2351750 | + | 246 | Protein_2252 | major capsid protein | - |
| H9192_RS11480 (2351913) | 2351913..2353148 | + | 1236 | WP_000896722.1 | hypothetical protein ; Integrase | Integrase |
| H9192_RS11485 (2353150) | 2353150..2353380 | + | 231 | WP_000737990.1 | AlpA family phage regulatory protein | - |
| H9192_RS11490 (2353397) | 2353397..2354218 | + | 822 | WP_241461932.1 | DUF2971 domain-containing protein | - |
| H9192_RS11495 (2354350) | 2354350..2354706 | - | 357 | WP_000872983.1 | SWIM zinc finger family protein | - |
| H9192_RS11500 (2354735) | 2354735..2355001 | + | 267 | Protein_2257 | hypothetical protein | - |
| H9192_RS11505 (2355065) | 2355065..2355268 | + | 204 | WP_016247985.1 | host cell division inhibitor Icd-like protein | - |
| H9192_RS11510 (2355261) | 2355261..2355446 | + | 186 | WP_000920681.1 | hypothetical protein | - |
| H9192_RS11515 (2355446) | 2355446..2355637 | + | 192 | WP_001156310.1 | hypothetical protein | - |
| H9192_RS11520 (2355638) | 2355638..2355859 | + | 222 | WP_016247986.1 | hypothetical protein | - |
| H9192_RS11525 (2355877) | 2355877..2356176 | + | 300 | WP_000425298.1 | DUF4222 domain-containing protein | - |
| H9192_RS11530 (2356173) | 2356173..2357924 | + | 1752 | WP_001710058.1 | DUF5906 domain-containing protein | - |
| H9192_RS11535 (2358214) | 2358214..2358471 | + | 258 | WP_001356810.1 | hypothetical protein | - |
| H9192_RS11540 (2358468) | 2358468..2358917 | + | 450 | WP_001710062.1 | single-stranded DNA-binding protein | - |
| H9192_RS11545 (2359134) | 2359134..2360174 | + | 1041 | WP_025693427.1 | major capsid protein | - |
| H9192_RS11550 (2360184) | 2360184..2360525 | + | 342 | WP_000190772.1 | head decoration protein | - |
| H9192_RS11555 (2360537) | 2360537..2360920 | + | 384 | WP_001178671.1 | AlpA family phage regulatory protein | - |
| H9192_RS11560 (2361404) | 2361404..2362720 | - | 1317 | WP_016247987.1 | hypothetical protein | - |
| H9192_RS11565 (2363076) | 2363076..2363864 | + | 789 | Protein_2270 | major capsid protein | - |
| H9192_RS11570 (2363906) | 2363906..2364304 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| H9192_RS11575 (2364316) | 2364316..2364669 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| H9192_RS11580 (2364681) | 2364681..2365259 | + | 579 | WP_000975070.1 | phage tail protein | - |
| H9192_RS11585 (2365256) | 2365256..2365651 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| H9192_RS11590 (2365659) | 2365659..2366399 | + | 741 | WP_001349920.1 | phage tail protein | - |
| H9192_RS11595 (2366415) | 2366415..2366837 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| H9192_RS11600 (2366819) | 2366819..2367253 | + | 435 | WP_025693426.1 | phage tail assembly protein T | - |
| H9192_RS11605 (2367246) | 2367246..2369807 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| H9192_RS11610 (2369804) | 2369804..2370133 | + | 330 | WP_000847379.1 | phage tail protein | - |
| H9192_RS11615 (2370133) | 2370133..2370831 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| H9192_RS11620 (2370837) | 2370837..2371580 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| H9192_RS11625 (2371577) | 2371577..2372149 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| H9192_RS11630 (2372210) | 2372210..2375707 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| H9192_RS11635 (2375777) | 2375777..2376376 | + | 600 | WP_241461935.1 | hypothetical protein | VF |
| H9192_RS11640 (2376441) | 2376441..2379515 | + | 3075 | WP_241461936.1 | phage tail protein | - |
| H9192_RS11645 (2379515) | 2379515..2380090 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H9192_RS11650 (2380188) | 2380188..2380778 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9192_RS11655 (2381095) | 2381095..2381328 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H9192_RS11660 (2381397) | 2381397..2381510 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| H9192_RS11665 (2382031) | 2382031..2383398 | + | 1368 | Protein_2290 | MHS family MFS transporter | - |
| H9192_RS11670 (2383487) | 2383487..2384947 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H9192_RS11675 (2384982) | 2384982..2385185 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H9192_RS11680 (2385362) | 2385362..2386048 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| H9192_RS11685 (2386137) | 2386137..2386883 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| H9192_RS11690 (2387020) | 2387020..2389065 | + | 2046 | Protein_2295 | peptidyl-dipeptidase Dcp | - |
| H9192_RS11695 (2389109) | 2389109..2389627 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| H9192_RS11700 (2389903) | 2389903..2390295 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| H9192_RS11705 (2390550) | 2390550..2391440 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| H9192_RS11710 (2391555) | 2391555..2391659 | - | 105 | WP_211180496.1 | protein MgtT | - |
| H9192_RS11715 (2391659) | 2391659..2391754 | - | 96 | WP_000901367.1 | protein MgtS | - |
| H9192_RS11720 (2391881) | 2391881..2393068 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| H9192_RS11725 (2393263) | 2393263..2394161 | + | 899 | Protein_2302 | O-acetylserine/cysteine exporter | - |
| H9192_RS11730 (2394192) | 2394192..2394410 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| H9192_RS11735 (2394442) | 2394442..2394825 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| H9192_RS11740 (2394845) | 2394845..2395279 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| H9192_RS11745 (2395491) | 2395491..2396156 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| H9192_RS11750 (2396181) | 2396181..2397371 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| H9192_RS11755 (2397521) | 2397521..2398636 | - | 1116 | WP_000258591.1 | putative protein YneK | - |
| H9192_RS11760 (2398714) | 2398714..2399595 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| H9192_RS11765 (2399696) | 2399696..2401084 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| H9192_RS11770 (2401148) | 2401148..2402074 | + | 927 | WP_000257409.1 | glutaminase B | - |
| H9192_RS11775 (2402074) | 2402074..2402433 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| H9192_RS11780 (2402506) | 2402506..2403492 | + | 987 | Protein_2313 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|