MGE detailed information
MGE type: Prophage MGE length: 35517 bp
Accession: NZ_CP060969 Location: 4132808..4168324 Organism: Escherichia coli strain EC5 Replicon: chromosome
Accession: NZ_CP060969 Location: 4132808..4168324 Organism: Escherichia coli strain EC5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9193_RS20045 (4130377) | 4130377..4131102 | - | 726 | WP_061353285.1 | type 1 fimbria chaperone FimC | - |
| H9193_RS20050 (4131139) | 4131139..4131678 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| H9193_RS20055 (4131743) | 4131743..4132297 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| H9193_RS20065 (4133556) | 4133556..4134152 | - | 597 | WP_072649983.1 | Tyrosine recombinase XerD | VF |
| H9193_RS20070 (4134629) | 4134629..4135231 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| H9193_RS20075 (4136685) | 4136685..4137401 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| H9193_RS20080 (4137421) | 4137421..4138527 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| H9193_RS20085 (4138592) | 4138592..4139572 | + | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| H9193_RS20090 (4139580) | 4139580..4140230 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| H9193_RS20095 (4140367) | 4140367..4140510 | + | 144 | Protein_3951 | HNH endonuclease | - |
| H9193_RS20100 (4141278) | 4141278..4141421 | - | 144 | Protein_3952 | hypothetical protein | - |
| H9193_RS20105 (4141506) | 4141506..4141703 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| H9193_RS20110 (4141723) | 4141723..4142211 | - | 489 | WP_000761685.1 | DUF5983 family protein | - |
| H9193_RS20115 (4142208) | 4142208..4142585 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| H9193_RS20120 (4142675) | 4142675..4143043 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H9193_RS20125 (4143123) | 4143123..4143344 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| H9193_RS20130 (4143431) | 4143431..4143907 | - | 477 | WP_001186165.1 | RadC family protein | - |
| H9193_RS20135 (4143922) | 4143922..4144407 | - | 486 | WP_000206664.1 | antirestriction protein | - |
| H9193_RS20140 (4144499) | 4144499..4145317 | - | 819 | WP_001175163.1 | DUF932 domain-containing protein | - |
| H9193_RS20145 (4145407) | 4145407..4145640 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| H9193_RS20150 (4145646) | 4145646..4146323 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| H9193_RS20155 (4146471) | 4146471..4147151 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| H9193_RS20160 (4147354) | 4147354..4148238 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| H9193_RS20165 (4148344) | 4148344..4149306 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| H9193_RS20170 (4149303) | 4149303..4150157 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| H9193_RS20175 (4151777) | 4151777..4152307 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| H9193_RS20180 (4152977) | 4152977..4153708 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| H9193_RS20185 (4153770) | 4153770..4154303 | - | 534 | WP_077890856.1 | phage terminase large subunit family protein | - |
| H9193_RS20190 (4154221) | 4154221..4154742 | - | 522 | WP_000999907.1 | hypothetical protein | - |
| H9193_RS20195 (4154907) | 4154907..4155410 | + | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| H9193_RS20200 (4155413) | 4155413..4156189 | + | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| H9193_RS20205 (4156468) | 4156468..4157142 | - | 675 | WP_000454879.1 | hypothetical protein | - |
| H9193_RS20210 (4157466) | 4157466..4158269 | + | 804 | WP_001609855.1 | hypothetical protein | - |
| H9193_RS20215 (4158455) | 4158455..4159006 | + | 552 | WP_072650102.1 | hypothetical protein | - |
| H9193_RS20220 (4159003) | 4159003..4159704 | + | 702 | WP_001022716.1 | hypothetical protein | - |
| H9193_RS20225 (4159742) | 4159742..4160563 | + | 822 | WP_000900255.1 | hypothetical protein | - |
| H9193_RS20230 (4160682) | 4160682..4161425 | + | 744 | WP_001617302.1 | hypothetical protein | - |
| H9193_RS20240 (4163184) | 4163184..4163784 | + | 601 | Protein_3980 | IS481 family transposase ISKpn28 | Transposase |
| H9193_RS20245 (4163773) | 4163773..4163988 | + | 216 | WP_095516826.1 | IS481 family transposase ISKpn28 | Transposase |
| H9193_RS20250 (4165477) | 4165477..4166043 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| H9193_RS20255 (4166290) | 4166290..4166865 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| H9193_RS20260 (4166934) | 4166934..4167170 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| H9193_RS20265 (4167167) | 4167167..4167325 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| H9193_RS20270 (4167413) | 4167413..4167961 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| H9193_RS20275 (4167980) | 4167980..4168324 | - | 345 | WP_072649904.1 | ProQ/FinO family protein | - |
| H9193_RS20280 (4168321) | 4168321..4168494 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| H9193_RS20285 (4168957) | 4168957..4170042 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| H9193_RS20290 (4170039) | 4170039..4171673 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|