MGE detailed information
MGE type: Conjugative plasmid MGE length: 89379 bp
Accession: NZ_CP060965 Location: 1..89379 Organism: Escherichia coli strain EC7 Replicon: plasmid pEC7-3
Accession: NZ_CP060965 Location: 1..89379 Organism: Escherichia coli strain EC7 Replicon: plasmid pEC7-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9194_RS24560 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| H9194_RS24565 (1773) | 1773..1913 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| H9194_RS24570 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| H9194_RS24575 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| H9194_RS24580 (3868) | 3868..5130 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H9194_RS24585 (5386) | 5386..6261 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| H9194_RS24590 (6308) | 6308..6652 | - | 345 | Protein_6 | WbuC family cupin fold metalloprotein | - |
| H9194_RS24595 (6595) | 6595..7989 | + | 1395 | WP_023150520.1 | protein YagA | - |
| H9194_RS24600 (8496) | 8496..8798 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| H9194_RS24605 (8795) | 8795..9421 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H9194_RS24610 (9609) | 9609..10880 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| H9194_RS24615 (10880) | 10880..11317 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9194_RS24620 (11314) | 11314..11562 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9194_RS24625 (11980) | 11980..12882 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| H9194_RS24630 (12886) | 12886..12972 | + | 87 | Protein_14 | hypothetical protein | - |
| H9194_RS24635 (12977) | 12977..13312 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| H9194_RS24640 (13650) | 13650..14630 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| H9194_RS24645 (14633) | 14633..15055 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| H9194_RS24650 (15059) | 15059..15370 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| H9194_RS24655 (15446) | 15446..16129 | + | 684 | WP_000086127.1 | DNA methylase | - |
| H9194_RS24660 (16130) | 16130..16351 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H9194_RS24665 (16281) | 16281..16799 | + | 519 | WP_223350510.1 | DUF1380 family protein | - |
| H9194_RS24670 (16844) | 16844..17614 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| H9194_RS24675 (18027) | 18027..18452 | + | 426 | WP_001198889.1 | antirestriction protein | - |
| H9194_RS24680 (18499) | 18499..18921 | + | 423 | WP_000271703.1 | DUF1380 family protein | - |
| H9194_RS24685 (18918) | 18918..19109 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H9194_RS24690 (19247) | 19247..19510 | + | 264 | WP_158213465.1 | hypothetical protein | - |
| H9194_RS24695 (20546) | 20546..22447 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| H9194_RS24700 (22597) | 22597..23082 | + | 486 | WP_071182148.1 | single-stranded DNA-binding protein | - |
| H9194_RS24705 (23140) | 23140..23373 | + | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| H9194_RS24710 (23432) | 23432..25390 | + | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| H9194_RS24715 (25443) | 25443..25877 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| H9194_RS24720 (25874) | 25874..26593 | + | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| H9194_RS24725 (26590) | 26590..27186 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| H9194_RS24730 (27648) | 27648..28148 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| H9194_RS24735 (28877) | 28877..29311 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| H9194_RS24740 (29405) | 29405..29671 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| H9194_RS24745 (29848) | 29848..30237 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H9194_RS24750 (30234) | 30234..31136 | + | 903 | WP_023150544.1 | Recombination-promoting nuclease RpnA | VF |
| H9194_RS24755 (31198) | 31198..31404 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| H9194_RS24760 (31435) | 31435..31686 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| H9194_RS24765 (32266) | 32266..33114 | + | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| H9194_RS24770 (33200) | 33200..33535 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9194_RS24775 (33769) | 33769..34101 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9194_RS24780 (34112) | 34112..36811 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| H9194_RS24785 (36848) | 36848..39139 | - | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| H9194_RS24790 (39132) | 39132..40202 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9194_RS24795 (40221) | 40221..41429 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (41609) | 41609..41666 | - | 58 | NuclAT_1 | - | - |
| - (41609) | 41609..41666 | - | 58 | NuclAT_1 | - | - |
| - (41609) | 41609..41666 | - | 58 | NuclAT_1 | - | - |
| - (41609) | 41609..41666 | - | 58 | NuclAT_1 | - | - |
| H9194_RS24800 (41736) | 41736..42515 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (43030) | 43030..43090 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43030) | 43030..43090 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43030) | 43030..43090 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43030) | 43030..43090 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| H9194_RS24805 (43142) | 43142..43294 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| H9194_RS24810 (43366) | 43366..43617 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9194_RS25770 (44118) | 44118..44213 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| H9194_RS24820 (44278) | 44278..44454 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| H9194_RS24825 (44846) | 44846..45055 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H9194_RS24830 (45127) | 45127..45789 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9194_RS24835 (45860) | 45860..48028 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| H9194_RS24840 (48125) | 48125..48709 | - | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| H9194_RS24845 (48738) | 48738..49940 | - | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| H9194_RS24850 (49907) | 49907..50521 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| H9194_RS24855 (50521) | 50521..53565 | - | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| H9194_RS24860 (53655) | 53655..54455 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H9194_RS24865 (54439) | 54439..54627 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9194_RS24870 (54691) | 54691..55095 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| H9194_RS24875 (55146) | 55146..55673 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9194_RS24880 (55673) | 55673..56377 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| H9194_RS24885 (56377) | 56377..57666 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| H9194_RS24890 (57669) | 57669..58652 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| H9194_RS24895 (58663) | 58663..59355 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9194_RS24900 (59352) | 59352..59699 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9194_RS24905 (59717) | 59717..63484 | - | 3768 | WP_012783940.1 | DUF5710 domain-containing protein | - |
| H9194_RS24910 (63574) | 63574..64125 | - | 552 | WP_012783942.1 | Phospholipase D | VF |
| H9194_RS24915 (64140) | 64140..64430 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| H9194_RS24920 (64427) | 64427..65575 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| H9194_RS24925 (65572) | 65572..66390 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| H9194_RS24930 (66387) | 66387..66845 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9194_RS24935 (67239) | 67239..67823 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| H9194_RS24940 (67883) | 67883..69085 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| H9194_RS24945 (69170) | 69170..69994 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| H9194_RS24950 (70145) | 70145..71299 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| H9194_RS24955 (72933) | 72933..74357 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| H9194_RS24960 (74357) | 74357..75013 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| H9194_RS24965 (74998) | 74998..75558 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| H9194_RS24970 (75568) | 75568..76182 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| H9194_RS24975 (76200) | 76200..77297 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9194_RS24980 (77310) | 77310..78863 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9194_RS24985 (78874) | 78874..79326 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| H9194_RS24990 (79313) | 79313..80608 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| H9194_RS24995 (80601) | 80601..82283 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9194_RS25000 (82297) | 82297..82734 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| H9194_RS25005 (82734) | 82734..83801 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| H9194_RS25010 (84475) | 84475..84927 | - | 453 | WP_001535696.1 | hypothetical protein | - |
| H9194_RS25015 (84970) | 84970..85224 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| H9194_RS25020 (85492) | 85492..86058 | - | 567 | WP_000776428.1 | protein TraD | - |
| H9194_RS25025 (86072) | 86072..86755 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| H9194_RS25030 (87009) | 87009..87542 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| H9194_RS25035 (87984) | 87984..88271 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9194_RS25040 (88189) | 88189..88467 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|