MGE detailed information
MGE type: Prophage MGE length: 34312 bp
Accession: NZ_CP060963 Location: 2295319..2329630 Organism: Escherichia coli strain EC7 Replicon: chromosome
Accession: NZ_CP060963 Location: 2295319..2329630 Organism: Escherichia coli strain EC7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9194_RS11280 (2292694) | 2292694..2295120 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9194_RS11285 (2295319) | 2295319..2295624 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H9194_RS11290 (2295732) | 2295732..2296442 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H9194_RS11295 (2296445) | 2296445..2297005 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H9194_RS11300 (2297040) | 2297040..2297381 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H9194_RS11305 (2297516) | 2297516..2297842 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| H9194_RS11310 (2298048) | 2298048..2299262 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H9194_RS11315 (2299274) | 2299274..2300293 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H9194_RS11320 (2300481) | 2300481..2301761 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| H9194_RS11325 (2301796) | 2301796..2302047 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| H9194_RS11330 (2302120) | 2302120..2303829 | - | 1710 | Protein_2222 | 3'-5' exoribonuclease | - |
| H9194_RS11335 (2303817) | 2303817..2304074 | + | 258 | Protein_2223 | hypothetical protein | - |
| H9194_RS11340 (2304115) | 2304115..2304537 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| H9194_RS11345 (2304534) | 2304534..2305023 | + | 490 | Protein_2225 | class I SAM-dependent methyltransferase | - |
| H9194_RS11350 (2305406) | 2305406..2306945 | - | 1540 | Protein_2226 | IS66 family transposase ISEc22 | Transposase |
| H9194_RS11355 (2306994) | 2306994..2307224 | - | 231 | Protein_2227 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9194_RS11360 (2307230) | 2307230..2307352 | - | 123 | Protein_2228 | IS66 family transposase ISEc22 | Transposase |
| H9194_RS11365 (2307595) | 2307595..2308016 | + | 422 | Protein_2229 | hypothetical protein | - |
| H9194_RS11370 (2308672) | 2308672..2309694 | + | 1023 | Protein_2230 | ISNCY family transposase ISCARN112 | Transposase |
| H9194_RS11375 (2309815) | 2309815..2309964 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| H9194_RS11380 (2310401) | 2310401..2310733 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| H9194_RS11385 (2310936) | 2310936..2311241 | - | 306 | WP_001326990.1 | protein YdfV | - |
| H9194_RS11390 (2311266) | 2311266..2311505 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H9194_RS11395 (2311505) | 2311505..2311792 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H9194_RS11400 (2311864) | 2311864..2312019 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H9194_RS11405 (2312236) | 2312236..2312487 | + | 252 | WP_000980994.1 | protein Rem | - |
| H9194_RS11410 (2312554) | 2312554..2312832 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| H9194_RS11415 (2312834) | 2312834..2313883 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H9194_RS11420 (2313897) | 2313897..2314649 | + | 753 | WP_001047135.1 | antitermination protein | - |
| H9194_RS11425 (2314927) | 2314927..2315016 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| H9194_RS11430 (2315071) | 2315071..2315283 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H9194_RS11435 (2315584) | 2315584..2315799 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H9194_RS11440 (2316163) | 2316163..2316333 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| H9194_RS11445 (2316553) | 2316553..2316768 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H9194_RS11450 (2316773) | 2316773..2317084 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| H9194_RS11455 (2317081) | 2317081..2317614 | + | 534 | WP_001092971.1 | lysozyme | - |
| H9194_RS11460 (2317611) | 2317611..2318108 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H9194_RS11465 (2318471) | 2318471..2318683 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H9194_RS11470 (2318694) | 2318694..2318882 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| H9194_RS11475 (2318885) | 2318885..2318950 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| H9194_RS11480 (2318955) | 2318955..2319185 | + | 231 | WP_000720962.1 | protein YnfN | - |
| H9194_RS11485 (2319357) | 2319357..2319530 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H9194_RS11490 (2319682) | 2319682..2320092 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H9194_RS11495 (2320150) | 2320150..2320383 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H9194_RS11500 (2320772) | 2320772..2321317 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H9194_RS11505 (2321292) | 2321292..2323097 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| H9194_RS11510 (2323097) | 2323097..2323672 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H9194_RS11515 (2323770) | 2323770..2324360 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9194_RS11520 (2324677) | 2324677..2324910 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H9194_RS11525 (2324979) | 2324979..2325092 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| H9194_RS11530 (2325613) | 2325613..2326980 | + | 1368 | Protein_2262 | MHS family MFS transporter | - |
| H9194_RS11535 (2327069) | 2327069..2328529 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H9194_RS11540 (2328564) | 2328564..2328767 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H9194_RS11545 (2328944) | 2328944..2329630 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| H9194_RS11550 (2329719) | 2329719..2330465 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| H9194_RS11555 (2330602) | 2330602..2332647 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| H9194_RS11560 (2332691) | 2332691..2333209 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| H9194_RS11565 (2333485) | 2333485..2333877 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|