MGE detailed information
MGE type: Conjugative plasmid MGE length: 87111 bp
Accession: NZ_CP060951 Location: 1..87111 Organism: Escherichia coli strain EC9 Replicon: plasmid pEC9-2
Accession: NZ_CP060951 Location: 1..87111 Organism: Escherichia coli strain EC9 Replicon: plasmid pEC9-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9196_RS23595 (46) | 46..1077 | + | 1032 | WP_000907868.1 | plasmid replication initiator RepA | - |
| H9196_RS23600 (1985) | 1985..2269 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H9196_RS23605 (2269) | 2269..2544 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H9196_RS23610 (2650) | 2650..2853 | + | 204 | Protein_3 | hypothetical protein | - |
| H9196_RS23615 (3123) | 3123..3389 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| H9196_RS23620 (3389) | 3389..3883 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| H9196_RS23625 (3939) | 3939..4541 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| H9196_RS23630 (4717) | 4717..5769 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| H9196_RS23635 (5982) | 5982..6572 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| H9196_RS23640 (6572) | 6572..6826 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| H9196_RS23645 (7093) | 7093..8592 | + | 1500 | WP_001542563.1 | RES family NAD+ phosphorylase | - |
| H9196_RS23650 (8617) | 8617..9480 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| H9196_RS23655 (10004) | 10004..10318 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| H9196_RS23660 (10380) | 10380..11150 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| H9196_RS23665 (11195) | 11195..11980 | + | 786 | WP_077249540.1 | site-specific integrase | - |
| H9196_RS23670 (12118) | 12118..12393 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| H9196_RS23675 (12387) | 12387..13031 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| H9196_RS23680 (13260) | 13260..14231 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| H9196_RS23685 (14236) | 14236..14628 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| H9196_RS23690 (14633) | 14633..15904 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| H9196_RS23695 (15904) | 15904..16341 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9196_RS23700 (16338) | 16338..16586 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9196_RS23705 (17004) | 17004..17906 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| H9196_RS23710 (17910) | 17910..18215 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| H9196_RS23715 (18291) | 18291..18974 | + | 684 | WP_000086137.1 | DNA methylase | - |
| H9196_RS23720 (18975) | 18975..19196 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H9196_RS23725 (19126) | 19126..19644 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| H9196_RS23730 (19689) | 19689..20459 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| H9196_RS23735 (20877) | 20877..21302 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| H9196_RS23740 (21349) | 21349..21771 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| H9196_RS23745 (21768) | 21768..21959 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H9196_RS23750 (22730) | 22730..23257 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| H9196_RS23755 (23315) | 23315..23548 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| H9196_RS23760 (23607) | 23607..25565 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| H9196_RS23765 (25620) | 25620..26054 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| H9196_RS23770 (26051) | 26051..26770 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| H9196_RS23775 (26767) | 26767..27363 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| H9196_RS23780 (27826) | 27826..28326 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| H9196_RS23785 (29055) | 29055..29489 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H9196_RS23790 (29582) | 29582..29848 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H9196_RS23795 (29913) | 29913..30827 | + | 915 | WP_000038334.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| H9196_RS23800 (30827) | 30827..31072 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| H9196_RS23805 (31103) | 31103..31354 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| H9196_RS23810 (31934) | 31934..32782 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| H9196_RS23815 (32868) | 32868..33203 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9196_RS23820 (33437) | 33437..33769 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9196_RS23825 (33780) | 33780..36479 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| H9196_RS23830 (36516) | 36516..38807 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| H9196_RS23835 (38800) | 38800..39870 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9196_RS23840 (39889) | 39889..41097 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| H9196_RS23845 (41404) | 41404..42183 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (42698) | 42698..42758 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42698) | 42698..42758 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42698) | 42698..42758 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42698) | 42698..42758 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| H9196_RS23850 (42810) | 42810..42962 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| H9196_RS23855 (43034) | 43034..43285 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9196_RS24575 (43786) | 43786..43881 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| H9196_RS23865 (43946) | 43946..44122 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| H9196_RS23870 (44514) | 44514..44723 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H9196_RS23875 (44795) | 44795..45457 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9196_RS23880 (45528) | 45528..47696 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| H9196_RS23885 (47793) | 47793..48377 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| H9196_RS23890 (48406) | 48406..49608 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| H9196_RS23895 (49575) | 49575..50189 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| H9196_RS23900 (50189) | 50189..53233 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| H9196_RS23905 (53323) | 53323..54123 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| H9196_RS23910 (54107) | 54107..54295 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9196_RS23915 (54359) | 54359..54763 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| H9196_RS23920 (54814) | 54814..55341 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9196_RS23925 (55341) | 55341..56045 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| H9196_RS23930 (56045) | 56045..57334 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| H9196_RS23935 (57337) | 57337..58320 | - | 984 | WP_021513963.1 | IncI1-type conjugal transfer protein TraN | - |
| H9196_RS23940 (58331) | 58331..59023 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9196_RS23945 (59020) | 59020..59367 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9196_RS23950 (59385) | 59385..63152 | - | 3768 | WP_058649948.1 | DUF5710 domain-containing protein | - |
| H9196_RS23955 (63242) | 63242..63793 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| H9196_RS23960 (63808) | 63808..64098 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| H9196_RS23965 (64095) | 64095..65243 | - | 1149 | WP_001024976.1 | plasmid transfer ATPase TraJ | - |
| H9196_RS23970 (65240) | 65240..66058 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| H9196_RS23975 (66055) | 66055..66513 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| H9196_RS23980 (66908) | 66908..67492 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| H9196_RS23985 (67552) | 67552..68754 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| H9196_RS23990 (68840) | 68840..69664 | - | 825 | WP_058649947.1 | conjugal transfer protein TraE | - |
| H9196_RS23995 (69815) | 69815..70969 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| H9196_RS24000 (71772) | 71772..73208 | - | 1437 | WP_015058913.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| H9196_RS24005 (73196) | 73196..73852 | - | 657 | WP_001193551.1 | A24 family peptidase | - |
| H9196_RS24010 (73837) | 73837..74397 | - | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| H9196_RS24015 (74407) | 74407..75021 | - | 615 | WP_000908228.1 | type 4 pilus major pilin | - |
| H9196_RS24020 (75038) | 75038..76123 | - | 1086 | WP_001208803.1 | type II secretion system F family protein | - |
| H9196_RS24025 (76136) | 76136..77689 | - | 1554 | WP_000362204.1 | ATPase, T2SS/T4P/T4SS family | - |
| H9196_RS24030 (77700) | 77700..78152 | - | 453 | WP_058649963.1 | type IV pilus biogenesis protein PilP | - |
| H9196_RS24035 (78139) | 78139..79434 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| H9196_RS24040 (79427) | 79427..81109 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| H9196_RS24045 (81123) | 81123..81560 | - | 438 | WP_000539811.1 | type IV pilus biogenesis protein PilM | - |
| H9196_RS24050 (81560) | 81560..82627 | - | 1068 | WP_021513968.1 | type IV pilus biogenesis lipoprotein PilL | - |
| H9196_RS24055 (83379) | 83379..83633 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| H9196_RS24060 (83805) | 83805..84488 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| H9196_RS24065 (84742) | 84742..85275 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| H9196_RS24070 (85717) | 85717..86004 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9196_RS24075 (85922) | 85922..86152 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|