MGE detailed information
MGE type: Genomic_island MGE length: 68495 bp
Accession: NZ_CP060933 Location: 1036388..1104882 Organism: Escherichia coli strain EC12 Replicon: chromosome
Accession: NZ_CP060933 Location: 1036388..1104882 Organism: Escherichia coli strain EC12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9199_RS05075 (1031624) | 1031624..1032346 | + | 723 | Protein_985 | Accessory colonization factor AcfD | - |
| H9199_RS05080 (1032333) | 1032333..1032782 | + | 450 | Protein_986 | type II secretion system protein GspC | - |
| H9199_RS05085 (1032812) | 1032812..1033594 | + | 783 | Protein_987 | secretin N-terminal domain-containing protein | - |
| H9199_RS05090 (1033587) | 1033587..1033937 | + | 351 | Protein_988 | type II secretion system protein GspK | - |
| H9199_RS05095 (1033934) | 1033934..1035112 | + | 1179 | WP_000094974.1 | type II secretion system protein GspL | - |
| H9199_RS05100 (1035114) | 1035114..1035650 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| H9199_RS05105 (1036065) | 1036065..1036391 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H9199_RS05110 (1036388) | 1036388..1036651 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H9199_RS05115 (1036723) | 1036723..1037589 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| H9199_RS05120 (1037674) | 1037674..1037871 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| H9199_RS05125 (1037883) | 1037883..1038374 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| H9199_RS05130 (1038371) | 1038371..1038748 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| H9199_RS05135 (1038795) | 1038795..1039169 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H9199_RS05140 (1039249) | 1039249..1039470 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| H9199_RS05145 (1039539) | 1039539..1040015 | - | 477 | WP_001186715.1 | RadC family protein | - |
| H9199_RS05150 (1040031) | 1040031..1040516 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| H9199_RS05155 (1040608) | 1040608..1041426 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| H9199_RS05160 (1041517) | 1041517..1041726 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| H9199_RS05165 (1041756) | 1041756..1042433 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| H9199_RS05170 (1042552) | 1042552..1043436 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| H9199_RS05175 (1043543) | 1043543..1044475 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| H9199_RS05180 (1044793) | 1044793..1046021 | + | 1229 | WP_166738926.1 | IS3 family transposase IS2 | Transposase |
| H9199_RS05185 (1045946) | 1045946..1046617 | - | 672 | WP_077251303.1 | hypothetical protein | - |
| H9199_RS05190 (1048368) | 1048368..1049099 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| H9199_RS05195 (1049193) | 1049193..1049348 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| H9199_RS05200 (1049372) | 1049372..1049632 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| H9199_RS05205 (1049644) | 1049644..1049850 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| H9199_RS05210 (1050284) | 1050284..1051888 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| H9199_RS05215 (1053485) | 1053485..1054051 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| H9199_RS05220 (1054171) | 1054171..1054320 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| H9199_RS05225 (1054335) | 1054335..1054907 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| H9199_RS05230 (1054976) | 1054976..1055212 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| H9199_RS05235 (1055481) | 1055481..1056029 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| H9199_RS05240 (1056048) | 1056048..1056296 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| H9199_RS05245 (1056365) | 1056365..1056556 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| H9199_RS25960 (1056959) | 1056959..1057650 | - | 692 | Protein_1020 | IS1 family transposase | - |
| H9199_RS05265 (1057710) | 1057710..1057886 | + | 177 | Protein_1021 | transketolase family protein | - |
| H9199_RS05270 (1058075) | 1058075..1058250 | + | 176 | Protein_1022 | transposase | - |
| H9199_RS05275 (1059113) | 1059113..1059679 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| H9199_RS05280 (1059920) | 1059920..1060735 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| H9199_RS05285 (1060796) | 1060796..1061599 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| H9199_RS05290 (1061599) | 1061599..1062435 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| H9199_RS05295 (1062741) | 1062741..1062983 | + | 243 | WP_000844627.1 | transposase | - |
| H9199_RS05300 (1063015) | 1063015..1063665 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9199_RS05305 (1063771) | 1063771..1064970 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| H9199_RS05310 (1064937) | 1064937..1065125 | - | 189 | Protein_1030 | IS91 family transposase | - |
| H9199_RS05315 (1065237) | 1065237..1065542 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| H9199_RS05320 (1065570) | 1065570..1066784 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| H9199_RS05325 (1067001) | 1067001..1067885 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| H9199_RS05330 (1067916) | 1067916..1068572 | - | 657 | Protein_1034 | IS91-like element ISVsa3 family transposase | - |
| H9199_RS05335 (1068506) | 1068506..1068784 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| H9199_RS05340 (1069207) | 1069207..1069521 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H9199_RS05345 (1069728) | 1069728..1069991 | + | 264 | Protein_1037 | Pap fimbrial major pilin protein | VF |
| H9199_RS05350 (1070442) | 1070442..1071674 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| H9199_RS05355 (1071825) | 1071825..1072986 | - | 1162 | Protein_1039 | IS3 family transposase IS3 | Transposase |
| H9199_RS05360 (1073154) | 1073154..1074134 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| H9199_RS05365 (1074131) | 1074131..1075075 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| H9199_RS05370 (1075078) | 1075078..1076160 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| H9199_RS05375 (1076627) | 1076627..1076893 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| H9199_RS05380 (1077193) | 1077193..1077707 | - | 515 | Protein_1044 | ISL3 family transposase ISEc38 | Transposase |
| H9199_RS05385 (1078315) | 1078315..1081728 | + | 3414 | WP_100729282.1 | DEAD/DEAH box helicase family protein | - |
| H9199_RS05390 (1081792) | 1081792..1083426 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| H9199_RS05395 (1083423) | 1083423..1084565 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| H9199_RS05400 (1084574) | 1084574..1086196 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| H9199_RS05405 (1086196) | 1086196..1087092 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| H9199_RS05410 (1087315) | 1087315..1087493 | - | 179 | Protein_1050 | integrase | - |
| H9199_RS05415 (1087723) | 1087723..1088460 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| H9199_RS05420 (1088880) | 1088880..1089776 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| H9199_RS05425 (1089825) | 1089825..1090904 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| H9199_RS05430 (1090951) | 1090951..1092522 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| H9199_RS05435 (1092519) | 1092519..1092785 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| H9199_RS05440 (1092925) | 1092925..1093122 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| H9199_RS05445 (1093175) | 1093175..1094848 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| H9199_RS05450 (1094992) | 1094992..1096026 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| H9199_RS05455 (1096127) | 1096127..1096351 | + | 225 | WP_232379240.1 | IS1 family transposase IS1A | Transposase |
| H9199_RS05460 (1096270) | 1096270..1096713 | + | 444 | WP_021547728.1 | IS3 family transposase IS2 | Transposase |
| H9199_RS05465 (1097291) | 1097291..1098685 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| H9199_RS05470 (1098880) | 1098880..1100310 | - | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| H9199_RS05475 (1100310) | 1100310..1101587 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| H9199_RS05480 (1101650) | 1101650..1103776 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| H9199_RS05485 (1103872) | 1103872..1104882 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| H9199_RS05490 (1105032) | 1105032..1106216 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| H9199_RS05500 (1106574) | 1106574..1107281 | - | 708 | WP_000234522.1 | DUF554 domain-containing protein | - |
| H9199_RS05505 (1107434) | 1107434..1107517 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| H9199_RS05510 (1107679) | 1107679..1109814 | + | 2136 | WP_000839746.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|