MGE detailed information
MGE type: Prophage MGE length: 59580 bp
Accession: NZ_CP060928 Location: 667624..727203 Organism: Escherichia coli strain EC13 Replicon: chromosome
Accession: NZ_CP060928 Location: 667624..727203 Organism: Escherichia coli strain EC13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9200_RS03255 (663727) | 663727..664713 | - | 987 | Protein_643 | GGDEF domain-containing protein | - |
| H9200_RS03260 (664786) | 664786..665145 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| H9200_RS03265 (665145) | 665145..666071 | - | 927 | WP_000257409.1 | glutaminase B | - |
| H9200_RS03270 (666135) | 666135..667523 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| H9200_RS03275 (667624) | 667624..668505 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| H9200_RS03280 (668583) | 668583..669698 | + | 1116 | WP_000258591.1 | putative protein YneK | - |
| H9200_RS03285 (669848) | 669848..671038 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| H9200_RS03290 (671063) | 671063..671728 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| H9200_RS03295 (671940) | 671940..672374 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| H9200_RS03300 (672394) | 672394..672777 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| H9200_RS03305 (672809) | 672809..673027 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| H9200_RS03310 (673058) | 673058..673956 | - | 899 | Protein_654 | O-acetylserine/cysteine exporter | - |
| H9200_RS03315 (674151) | 674151..675338 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| H9200_RS03320 (675465) | 675465..675560 | + | 96 | WP_000901367.1 | protein MgtS | - |
| H9200_RS03325 (675560) | 675560..675664 | + | 105 | WP_211180496.1 | protein MgtT | - |
| H9200_RS03330 (675779) | 675779..676669 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| H9200_RS03335 (676924) | 676924..677316 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| H9200_RS03340 (677592) | 677592..678098 | + | 507 | WP_088551036.1 | 2-oxo-tetronate isomerase | - |
| H9200_RS03345 (678154) | 678154..680199 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| H9200_RS03350 (680336) | 680336..681082 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| H9200_RS03355 (681171) | 681171..681857 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| H9200_RS03360 (682034) | 682034..682237 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H9200_RS03365 (682272) | 682272..683732 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H9200_RS03370 (683821) | 683821..685187 | - | 1367 | Protein_666 | MHS family MFS transporter | - |
| H9200_RS03375 (685708) | 685708..685821 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| H9200_RS03380 (685890) | 685890..686123 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H9200_RS03385 (686440) | 686440..687030 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9200_RS03390 (687128) | 687128..687703 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H9200_RS03395 (687703) | 687703..689508 | - | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| H9200_RS03400 (689483) | 689483..690028 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H9200_RS03405 (690417) | 690417..690650 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H9200_RS03410 (690708) | 690708..691118 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H9200_RS03415 (691270) | 691270..691443 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H9200_RS03420 (691615) | 691615..691845 | - | 231 | WP_000720962.1 | protein YnfN | - |
| H9200_RS03425 (691850) | 691850..691915 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| H9200_RS03430 (691918) | 691918..692106 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| H9200_RS03435 (692117) | 692117..692329 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H9200_RS03440 (692692) | 692692..693189 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H9200_RS03445 (693186) | 693186..693719 | - | 534 | WP_001092971.1 | lysozyme | - |
| H9200_RS03450 (693716) | 693716..694027 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| H9200_RS03455 (694032) | 694032..694247 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H9200_RS03460 (694467) | 694467..694637 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| H9200_RS03465 (695001) | 695001..695216 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H9200_RS03470 (695517) | 695517..695729 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H9200_RS03475 (695784) | 695784..695873 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| H9200_RS03480 (696151) | 696151..696903 | - | 753 | WP_001047135.1 | antitermination protein | - |
| H9200_RS03485 (696917) | 696917..697966 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H9200_RS03490 (697968) | 697968..698246 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| H9200_RS03495 (698313) | 698313..698564 | - | 252 | WP_000980994.1 | protein Rem | - |
| H9200_RS03500 (698781) | 698781..698936 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H9200_RS03505 (699008) | 699008..699295 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H9200_RS03510 (699295) | 699295..699534 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H9200_RS03515 (699559) | 699559..699864 | + | 306 | WP_001326990.1 | protein YdfV | - |
| H9200_RS03520 (700067) | 700067..700399 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| H9200_RS03525 (700836) | 700836..700985 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| H9200_RS03530 (701106) | 701106..702128 | - | 1023 | Protein_698 | ISNCY family transposase ISCARN112 | Transposase |
| H9200_RS03535 (702918) | 702918..703205 | - | 288 | Protein_699 | hypothetical protein | - |
| H9200_RS03540 (703448) | 703448..703570 | + | 123 | Protein_700 | IS66 family transposase ISEc22 | Transposase |
| H9200_RS03545 (703576) | 703576..703806 | + | 231 | Protein_701 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9200_RS03550 (703855) | 703855..705394 | + | 1540 | Protein_702 | IS66 family transposase ISEc22 | Transposase |
| H9200_RS03555 (705777) | 705777..706266 | - | 490 | Protein_703 | class I SAM-dependent methyltransferase | - |
| H9200_RS03560 (706263) | 706263..706685 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| H9200_RS03565 (706726) | 706726..706983 | - | 258 | Protein_705 | hypothetical protein | - |
| H9200_RS03570 (706971) | 706971..708680 | + | 1710 | Protein_706 | 3'-5' exoribonuclease | - |
| H9200_RS03575 (708753) | 708753..709004 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| H9200_RS03580 (709039) | 709039..710319 | + | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| H9200_RS03585 (710507) | 710507..711526 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H9200_RS03590 (711538) | 711538..712752 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H9200_RS03595 (712958) | 712958..713284 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| H9200_RS03600 (713419) | 713419..713760 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H9200_RS03605 (713795) | 713795..714355 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H9200_RS03610 (714358) | 714358..715068 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H9200_RS03615 (715176) | 715176..715481 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H9200_RS03620 (715680) | 715680..718106 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9200_RS03625 (718167) | 718167..720590 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9200_RS03630 (720601) | 720601..721218 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| H9200_RS03635 (721220) | 721220..722074 | + | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| H9200_RS03640 (722117) | 722117..722731 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| H9200_RS03645 (722890) | 722890..724182 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| H9200_RS03650 (724135) | 724135..724830 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| H9200_RS03655 (724955) | 724955..726175 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| H9200_RS03660 (726310) | 726310..727203 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| H9200_RS03665 (727310) | 727310..728563 | + | 1254 | WP_106108184.1 | MFS transporter | - |
| H9200_RS03670 (728987) | 728987..729295 | + | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| H9200_RS03675 (729388) | 729388..729471 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| H9200_RS03680 (729571) | 729571..730392 | + | 822 | WP_001260865.1 | serine protease | - |
| H9200_RS03685 (730431) | 730431..730760 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| H9200_RS03690 (730747) | 730747..731112 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|