MGE detailed information
MGE type: Prophage MGE length: 68695 bp
Accession: NZ_CP060928 Location: 3648533..3717227 Organism: Escherichia coli strain EC13 Replicon: chromosome
Accession: NZ_CP060928 Location: 3648533..3717227 Organism: Escherichia coli strain EC13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9200_RS17730 (3644221) | 3644221..3645372 | - | 1152 | WP_001300012.1 | double-cubane-cluster-containing anaerobic reductase | - |
| H9200_RS17735 (3645488) | 3645488..3646768 | - | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| H9200_RS17740 (3646809) | 3646809..3648041 | - | 1233 | WP_001380906.1 | multidrug efflux MFS transporter MdtM | - |
| H9200_RS17745 (3648187) | 3648187..3648282 | - | 96 | Protein_3469 | dienelactone hydrolase family protein | - |
| H9200_RS17750 (3648339) | 3648339..3649036 | + | 698 | Protein_3470 | IS1 family transposase | - |
| H9200_RS17755 (3649235) | 3649235..3649522 | + | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| H9200_RS17760 (3649509) | 3649509..3649811 | + | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| H9200_RS17765 (3649845) | 3649845..3650801 | - | 957 | WP_001297640.1 | GTPase | - |
| H9200_RS17770 (3650812) | 3650812..3651015 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| H9200_RS17775 (3651065) | 3651065..3653215 | - | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| H9200_RS17780 (3653592) | 3653592..3655247 | + | 1656 | WP_000919541.1 | hypothetical protein | VF |
| H9200_RS17785 (3655296) | 3655296..3656657 | - | 1362 | WP_000410120.1 | MFS transporter | - |
| H9200_RS17790 (3656872) | 3656872..3657786 | - | 915 | WP_000091570.1 | GntR family transcriptional regulator | - |
| H9200_RS17800 (3658701) | 3658701..3659723 | + | 1023 | WP_000106030.1 | L-galactonate oxidoreductase | - |
| H9200_RS17805 (3659862) | 3659862..3662153 | - | 2292 | WP_001292655.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| H9200_RS17810 (3662407) | 3662407..3662901 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| H9200_RS17815 (3662950) | 3662950..3663687 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| H9200_RS17820 (3663690) | 3663690..3664229 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| H9200_RS17825 (3664337) | 3664337..3664810 | - | 474 | WP_000538182.1 | threonine/serine exporter | - |
| H9200_RS17830 (3664801) | 3664801..3665571 | - | 771 | WP_001295409.1 | threonine/serine exporter ThrE family protein | - |
| H9200_RS17835 (3666190) | 3666190..3666915 | + | 726 | WP_000936635.1 | hypothetical protein | VF |
| H9200_RS17840 (3666873) | 3666873..3667550 | + | 678 | WP_001300509.1 | hypothetical protein | VF |
| H9200_RS17845 (3667588) | 3667588..3668376 | - | 789 | WP_000331551.1 | siderophore-iron reductase FhuF | - |
| H9200_RS17850 (3668517) | 3668517..3668753 | + | 237 | WP_001362956.1 | DUF1435 domain-containing protein | - |
| H9200_RS17870 (3669414) | 3669414..3670445 | - | 1032 | WP_001272262.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| H9200_RS17875 (3670548) | 3670548..3670961 | + | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| H9200_RS17880 (3670930) | 3670930..3671376 | + | 447 | WP_001092450.1 | hypothetical protein | VF |
| H9200_RS17885 (3671391) | 3671391..3672068 | + | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| H9200_RS17890 (3672454) | 3672454..3673689 | + | 1236 | WP_106108197.1 | hypothetical protein ; Integrase | Integrase |
| H9200_RS17895 (3673852) | 3673852..3675792 | - | 1941 | WP_106108196.1 | tetratricopeptide repeat protein | - |
| H9200_RS17900 (3676273) | 3676273..3676512 | - | 240 | Protein_3497 | DUF551 domain-containing protein | - |
| H9200_RS17905 (3676893) | 3676893..3677255 | - | 363 | WP_106108194.1 | DUF551 domain-containing protein | - |
| H9200_RS17910 (3677246) | 3677246..3677782 | - | 537 | WP_000008242.1 | 5'-deoxynucleotidase | - |
| H9200_RS17915 (3677910) | 3677910..3678734 | - | 825 | WP_106108193.1 | DUF2303 family protein | - |
| H9200_RS17920 (3678800) | 3678800..3679162 | - | 363 | WP_000135680.1 | protein YfdP | - |
| H9200_RS17925 (3679850) | 3679850..3680524 | - | 675 | WP_094317521.1 | LexA family transcriptional regulator | - |
| H9200_RS17930 (3680615) | 3680615..3680815 | + | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| H9200_RS17935 (3680859) | 3680859..3681410 | + | 552 | WP_106108191.1 | protein YmfL | - |
| H9200_RS17940 (3681556) | 3681556..3681735 | + | 180 | WP_071593530.1 | DUF4222 domain-containing protein | - |
| H9200_RS17945 (3681665) | 3681665..3682243 | + | 579 | WP_225088649.1 | ash family protein | - |
| H9200_RS17950 (3682236) | 3682236..3682472 | + | 237 | WP_172439330.1 | hypothetical protein | - |
| H9200_RS17955 (3682469) | 3682469..3683287 | + | 819 | WP_000061506.1 | helix-turn-helix domain-containing protein | - |
| H9200_RS17960 (3683284) | 3683284..3683778 | + | 495 | WP_097333622.1 | PerC family transcriptional regulator | - |
| H9200_RS17965 (3683778) | 3683778..3684431 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| H9200_RS17970 (3684428) | 3684428..3684754 | + | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| H9200_RS17975 (3684751) | 3684751..3685140 | + | 390 | WP_106108190.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H9200_RS17980 (3685160) | 3685160..3685969 | + | 810 | WP_001061378.1 | KilA-N domain-containing protein | - |
| H9200_RS17985 (3685977) | 3685977..3686966 | + | 990 | WP_023352842.1 | DUF968 domain-containing protein | - |
| H9200_RS17990 (3686981) | 3686981..3687361 | + | 381 | WP_080086273.1 | antiterminator Q family protein | - |
| H9200_RS17995 (3687376) | 3687376..3688395 | - | 1020 | WP_000357056.1 | hypothetical protein | - |
| H9200_RS18000 (3688715) | 3688715..3688918 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| H9200_RS18005 (3689069) | 3689069..3690121 | + | 1053 | WP_106108189.1 | site-specific DNA-methyltransferase | - |
| H9200_RS18010 (3690189) | 3690189..3690404 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| H9200_RS18015 (3690404) | 3690404..3690901 | + | 498 | WP_001135250.1 | lysozyme RrrD | - |
| H9200_RS18020 (3690898) | 3690898..3691365 | + | 468 | WP_001341210.1 | lysis system i-spanin subunit Rz | - |
| H9200_RS18025 (3691353) | 3691353..3691505 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| H9200_RS18030 (3692181) | 3692181..3692675 | + | 495 | WP_000373426.1 | DUF1441 family protein | - |
| H9200_RS18035 (3692675) | 3692675..3694777 | + | 2103 | WP_001700320.1 | phage terminase large subunit family protein | - |
| H9200_RS18040 (3694774) | 3694774..3694986 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| H9200_RS18045 (3694914) | 3694914..3696461 | + | 1548 | WP_072652320.1 | phage portal protein | - |
| H9200_RS18050 (3696439) | 3696439..3698466 | + | 2028 | WP_001546838.1 | hypothetical protein | VF |
| H9200_RS18055 (3698553) | 3698553..3698876 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| H9200_RS18060 (3698869) | 3698869..3699144 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| H9200_RS18065 (3699156) | 3699156..3699734 | + | 579 | WP_000677112.1 | phage tail protein | - |
| H9200_RS18070 (3699731) | 3699731..3700132 | + | 402 | WP_001079415.1 | phage tail terminator protein | - |
| H9200_RS18075 (3700143) | 3700143..3700886 | + | 744 | WP_001401822.1 | phage tail protein | - |
| H9200_RS18080 (3700947) | 3700947..3701333 | + | 387 | WP_001370402.1 | phage minor tail protein G | - |
| H9200_RS18085 (3701342) | 3701342..3701671 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| H9200_RS18090 (3701643) | 3701643..3704699 | + | 3057 | WP_001763914.1 | phage tail tape measure protein | - |
| H9200_RS18095 (3704699) | 3704699..3705028 | + | 330 | WP_000447253.1 | phage tail protein | - |
| H9200_RS18100 (3705038) | 3705038..3705736 | + | 699 | WP_039065484.1 | phage minor tail protein L | - |
| H9200_RS18105 (3705742) | 3705742..3706485 | + | 744 | WP_106108188.1 | C40 family peptidase | - |
| H9200_RS18110 (3706383) | 3706383..3707030 | + | 648 | WP_075591746.1 | tail assembly protein | - |
| H9200_RS18115 (3707090) | 3707090..3710488 | + | 3399 | WP_094319861.1 | host specificity protein J | - |
| H9200_RS18120 (3710555) | 3710555..3711154 | + | 600 | WP_001233090.1 | hypothetical protein | VF |
| H9200_RS18125 (3711219) | 3711219..3714569 | + | 3351 | WP_106108187.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H9200_RS18130 (3714569) | 3714569..3715153 | + | 585 | WP_053891212.1 | tail fiber assembly protein | - |
| H9200_RS18135 (3715140) | 3715140..3715399 | + | 260 | Protein_3544 | recombinase family protein | - |
| H9200_RS18140 (3715599) | 3715599..3717227 | - | 1629 | WP_001570652.1 | hypothetical protein | VF |
| H9200_RS18145 (3717563) | 3717563..3717823 | - | 261 | WP_001217544.1 | DinI-like family protein | - |
| H9200_RS18150 (3718043) | 3718043..3719629 | + | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| H9200_RS18155 (3720022) | 3720022..3720627 | + | 606 | WP_001295410.1 | molecular chaperone OsmY | - |
| H9200_RS18160 (3720754) | 3720754..3720915 | + | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| H9200_RS18165 (3721037) | 3721037..3722110 | + | 1074 | WP_001299187.1 | patatin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|