MGE detailed information
MGE type: Genomic_island MGE length: 68495 bp
Accession: NZ_CP060914 Location: 1039547..1108041 Organism: Escherichia coli strain EC18 Replicon: chromosome
Accession: NZ_CP060914 Location: 1039547..1108041 Organism: Escherichia coli strain EC18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9203_RS05095 (1034783) | 1034783..1035505 | + | 723 | Protein_989 | Accessory colonization factor AcfD | - |
| H9203_RS05100 (1035492) | 1035492..1035941 | + | 450 | Protein_990 | type II secretion system protein GspC | - |
| H9203_RS05105 (1035971) | 1035971..1036753 | + | 783 | Protein_991 | secretin N-terminal domain-containing protein | - |
| H9203_RS05110 (1036746) | 1036746..1037096 | + | 351 | Protein_992 | type II secretion system protein GspK | - |
| H9203_RS05115 (1037093) | 1037093..1038271 | + | 1179 | WP_000094974.1 | type II secretion system protein GspL | - |
| H9203_RS05120 (1038273) | 1038273..1038809 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| H9203_RS05125 (1039224) | 1039224..1039550 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H9203_RS05130 (1039547) | 1039547..1039810 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H9203_RS05135 (1039882) | 1039882..1040748 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| H9203_RS05140 (1040833) | 1040833..1041030 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| H9203_RS05145 (1041042) | 1041042..1041533 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| H9203_RS05150 (1041530) | 1041530..1041907 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| H9203_RS05155 (1041954) | 1041954..1042328 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H9203_RS05160 (1042408) | 1042408..1042629 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| H9203_RS05165 (1042698) | 1042698..1043174 | - | 477 | WP_001186715.1 | RadC family protein | - |
| H9203_RS05170 (1043190) | 1043190..1043675 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| H9203_RS05175 (1043767) | 1043767..1044585 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| H9203_RS05180 (1044676) | 1044676..1044885 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| H9203_RS05185 (1044915) | 1044915..1045592 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| H9203_RS05190 (1045711) | 1045711..1046595 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| H9203_RS05195 (1046702) | 1046702..1047634 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| H9203_RS05200 (1047952) | 1047952..1049180 | + | 1229 | WP_166738926.1 | IS3 family transposase IS2 | Transposase |
| H9203_RS05205 (1049105) | 1049105..1049776 | - | 672 | WP_077251303.1 | hypothetical protein | - |
| H9203_RS05210 (1051527) | 1051527..1052258 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| H9203_RS05215 (1052352) | 1052352..1052507 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| H9203_RS05220 (1052531) | 1052531..1052791 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| H9203_RS05225 (1052803) | 1052803..1053009 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| H9203_RS05230 (1053443) | 1053443..1055047 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| H9203_RS05235 (1056644) | 1056644..1057210 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| H9203_RS05240 (1057330) | 1057330..1057479 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| H9203_RS05245 (1057494) | 1057494..1058066 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| H9203_RS05250 (1058135) | 1058135..1058371 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| H9203_RS05255 (1058640) | 1058640..1059188 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| H9203_RS05260 (1059207) | 1059207..1059455 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| H9203_RS05265 (1059524) | 1059524..1059715 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| H9203_RS25795 (1060118) | 1060118..1060809 | - | 692 | Protein_1024 | IS1 family transposase | - |
| H9203_RS05285 (1060869) | 1060869..1061045 | + | 177 | Protein_1025 | transketolase family protein | - |
| H9203_RS05290 (1061234) | 1061234..1061409 | + | 176 | Protein_1026 | transposase | - |
| H9203_RS05295 (1062272) | 1062272..1062838 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| H9203_RS05300 (1063079) | 1063079..1063894 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| H9203_RS05305 (1063955) | 1063955..1064758 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| H9203_RS05310 (1064758) | 1064758..1065594 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| H9203_RS05315 (1065900) | 1065900..1066142 | + | 243 | WP_000844627.1 | transposase | - |
| H9203_RS05320 (1066174) | 1066174..1066824 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9203_RS05325 (1066930) | 1066930..1068129 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| H9203_RS05330 (1068096) | 1068096..1068284 | - | 189 | Protein_1034 | IS91 family transposase | - |
| H9203_RS05335 (1068396) | 1068396..1068701 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| H9203_RS05340 (1068729) | 1068729..1069943 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| H9203_RS05345 (1070160) | 1070160..1071044 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| H9203_RS05350 (1071075) | 1071075..1071731 | - | 657 | Protein_1038 | IS91-like element ISVsa3 family transposase | - |
| H9203_RS05355 (1071665) | 1071665..1071943 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| H9203_RS05360 (1072366) | 1072366..1072680 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H9203_RS05365 (1072887) | 1072887..1073150 | + | 264 | Protein_1041 | Pap fimbrial major pilin protein | VF |
| H9203_RS05370 (1073601) | 1073601..1074833 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| H9203_RS05375 (1074984) | 1074984..1076145 | - | 1162 | Protein_1043 | IS3 family transposase IS3 | Transposase |
| H9203_RS05380 (1076313) | 1076313..1077293 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| H9203_RS05385 (1077290) | 1077290..1078234 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| H9203_RS05390 (1078237) | 1078237..1079319 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| H9203_RS05395 (1079786) | 1079786..1080052 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| H9203_RS05400 (1080352) | 1080352..1080866 | - | 515 | Protein_1048 | ISL3 family transposase ISEc38 | Transposase |
| H9203_RS05405 (1081474) | 1081474..1084887 | + | 3414 | WP_100729282.1 | DEAD/DEAH box helicase family protein | - |
| H9203_RS05410 (1084951) | 1084951..1086585 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| H9203_RS05415 (1086582) | 1086582..1087724 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| H9203_RS05420 (1087733) | 1087733..1089355 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| H9203_RS05425 (1089355) | 1089355..1090251 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| H9203_RS05430 (1090474) | 1090474..1090652 | - | 179 | Protein_1054 | integrase | - |
| H9203_RS05435 (1090882) | 1090882..1091619 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| H9203_RS05440 (1092039) | 1092039..1092935 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| H9203_RS05445 (1092984) | 1092984..1094063 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| H9203_RS05450 (1094110) | 1094110..1095681 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| H9203_RS05455 (1095678) | 1095678..1095944 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| H9203_RS05460 (1096084) | 1096084..1096281 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| H9203_RS05465 (1096334) | 1096334..1098007 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| H9203_RS05470 (1098151) | 1098151..1099185 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| H9203_RS05475 (1099286) | 1099286..1099510 | + | 225 | WP_232379240.1 | IS1 family transposase IS1A | Transposase |
| H9203_RS05480 (1099429) | 1099429..1099872 | + | 444 | WP_021547728.1 | IS3 family transposase IS2 | Transposase |
| H9203_RS05485 (1100450) | 1100450..1101844 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| H9203_RS05490 (1102039) | 1102039..1103469 | - | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| H9203_RS05495 (1103469) | 1103469..1104746 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| H9203_RS05500 (1104809) | 1104809..1106935 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| H9203_RS05505 (1107031) | 1107031..1108041 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| H9203_RS05510 (1108191) | 1108191..1109375 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| H9203_RS05520 (1109733) | 1109733..1110440 | - | 708 | WP_000234522.1 | DUF554 domain-containing protein | - |
| H9203_RS05525 (1110593) | 1110593..1110676 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| H9203_RS05530 (1110838) | 1110838..1112973 | + | 2136 | WP_000839746.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|