MGE detailed information
MGE type: Prophage MGE length: 57955 bp
Accession: NZ_CP060899 Location: 4047621..4105575 Organism: Escherichia coli strain EC21 Replicon: chromosome
Accession: NZ_CP060899 Location: 4047621..4105575 Organism: Escherichia coli strain EC21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9206_RS19620 (4043026) | 4043026..4043667 | - | 642 | WP_000439686.1 | L-fuculose-phosphate aldolase | - |
| H9206_RS19625 (4043698) | 4043698..4044813 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| H9206_RS19630 (4044823) | 4044823..4046082 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| H9206_RS19635 (4046882) | 4046882..4047136 | + | 255 | WP_000788354.1 | glycosyltransferase family 2 protein | - |
| H9206_RS19640 (4047621) | 4047621..4048325 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9206_RS19645 (4049068) | 4049068..4051143 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| H9206_RS19650 (4051136) | 4051136..4052422 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| H9206_RS19655 (4052703) | 4052703..4054269 | + | 1567 | Protein_3848 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| H9206_RS19660 (4054282) | 4054282..4055472 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| H9206_RS19665 (4055465) | 4055465..4057087 | - | 1623 | WP_001295726.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| H9206_RS19670 (4057557) | 4057557..4059098 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| H9206_RS19675 (4059692) | 4059692..4059868 | - | 177 | Protein_3852 | IS3 family transposase ISSen1 | Transposase |
| H9206_RS19680 (4060235) | 4060235..4060384 | - | 150 | Protein_3853 | hypothetical protein | - |
| H9206_RS19685 (4060490) | 4060490..4060666 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| H9206_RS19690 (4060683) | 4060683..4061171 | - | 489 | WP_000761690.1 | DUF5983 family protein | - |
| H9206_RS19695 (4061168) | 4061168..4061545 | - | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| H9206_RS19700 (4061635) | 4061635..4062003 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H9206_RS19705 (4062166) | 4062166..4062387 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| H9206_RS19710 (4062450) | 4062450..4062926 | - | 477 | WP_001186775.1 | RadC family protein | - |
| H9206_RS19715 (4062942) | 4062942..4063415 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| H9206_RS19720 (4063755) | 4063755..4064573 | - | 819 | WP_042631095.1 | DUF932 domain-containing protein | - |
| H9206_RS19725 (4064691) | 4064691..4064886 | - | 196 | Protein_3862 | DUF905 family protein | - |
| H9206_RS19730 (4064957) | 4064957..4065982 | - | 1026 | Protein_3863 | autotransporter domain-containing protein | - |
| H9206_RS19735 (4067030) | 4067030..4067632 | - | 603 | WP_000813435.1 | hypothetical protein | - |
| H9206_RS19740 (4067728) | 4067728..4067934 | - | 207 | WP_000211308.1 | helix-turn-helix domain-containing protein | - |
| H9206_RS19745 (4068708) | 4068708..4068857 | + | 150 | WP_071526287.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| H9206_RS19750 (4069190) | 4069190..4069387 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| H9206_RS19755 (4069587) | 4069587..4070156 | + | 570 | WP_000221530.1 | inovirus Gp2 family protein | - |
| H9206_RS19760 (4070416) | 4070416..4070676 | + | 261 | Protein_3869 | putative zinc ribbon protein | - |
| H9206_RS19765 (4070651) | 4070651..4071334 | - | 684 | Protein_3870 | esterase-like activity of phytase family protein | - |
| H9206_RS19770 (4071616) | 4071616..4071747 | + | 132 | Protein_3871 | IS3 family transposase | - |
| H9206_RS19775 (4072085) | 4072085..4072366 | - | 282 | WP_223349491.1 | biofilm development regulator YmgB/AriR family protein | - |
| H9206_RS19780 (4072681) | 4072681..4072785 | - | 105 | Protein_3873 | IS3 family transposase | - |
| H9206_RS19785 (4072812) | 4072812..4072961 | - | 150 | Protein_3874 | IS3 family transposase | - |
| H9206_RS19790 (4073030) | 4073030..4073092 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| H9206_RS19795 (4073103) | 4073103..4073800 | - | 698 | Protein_3876 | IS1 family transposase | - |
| H9206_RS19800 (4073887) | 4073887..4073955 | - | 69 | WP_211180522.1 | protein YkiE | - |
| H9206_RS19805 (4074092) | 4074092..4074613 | + | 522 | WP_029402667.1 | hypothetical protein | VF |
| H9206_RS19810 (4074610) | 4074610..4075563 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| H9206_RS19815 (4075650) | 4075650..4077974 | + | 2325 | WP_000188262.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| H9206_RS19820 (4078019) | 4078019..4078921 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| H9206_RS19825 (4078918) | 4078918..4079916 | + | 999 | WP_000125187.1 | hypothetical protein | VF |
| H9206_RS19830 (4079913) | 4079913..4080869 | + | 957 | WP_000684856.1 | hypothetical protein | VF |
| H9206_RS19835 (4080870) | 4080870..4081637 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| H9206_RS19840 (4082194) | 4082194..4082451 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| H9206_RS19845 (4082534) | 4082534..4083318 | - | 785 | Protein_3886 | IS3 family transposase ISEc52 | Transposase |
| H9206_RS19850 (4083385) | 4083385..4084541 | + | 1157 | WP_085947616.1 | IS3 family transposase ISSd1 | Transposase |
| H9206_RS19855 (4084695) | 4084695..4086692 | + | 1998 | WP_001293436.1 | choline BCCT transporter BetT | - |
| H9206_RS19860 (4086755) | 4086755..4087093 | + | 339 | Protein_3889 | DUF2254 family protein | - |
| H9206_RS19865 (4088017) | 4088017..4088018 | - | 2 | WP_085948656.1 | IS3 family transposase IS911 | Transposase |
| H9206_RS19870 (4088358) | 4088358..4088561 | - | 204 | WP_000355616.1 | MFS transporter | - |
| H9206_RS19875 (4088584) | 4088584..4088841 | + | 258 | WP_000254999.1 | surface-adhesin E family protein | - |
| H9206_RS19880 (4088894) | 4088894..4089019 | - | 126 | WP_000594405.1 | protein YthA | - |
| H9206_RS19885 (4089062) | 4089062..4090180 | - | 1119 | WP_000611568.1 | 2,7-anhydro-N-acetylneuraminate hydratase | - |
| H9206_RS19890 (4090192) | 4090192..4091409 | - | 1218 | WP_000179692.1 | MFS transporter | - |
| H9206_RS19895 (4092018) | 4092018..4093364 | + | 1347 | WP_000483778.1 | IS4 family transposase IS4 | Transposase |
| H9206_RS19900 (4093392) | 4093392..4093562 | - | 171 | WP_156849376.1 | hypothetical protein | - |
| H9206_RS19905 (4093878) | 4093878..4094107 | - | 230 | Protein_3898 | transposase domain-containing protein | - |
| H9206_RS19910 (4094694) | 4094694..4095875 | + | 1182 | Protein_3899 | phosphoethanolamine transferase | - |
| H9206_RS19915 (4096192) | 4096192..4097457 | - | 1266 | WP_001218934.1 | hypothetical protein ; Integrase | Integrase |
| H9206_RS19925 (4097924) | 4097924..4098943 | + | 1020 | WP_015364387.1 | NADPH-dependent aldehyde reductase Ahr | - |
| H9206_RS19930 (4098947) | 4098947..4099510 | - | 564 | WP_087525664.1 | gluconokinase | - |
| H9206_RS19935 (4099727) | 4099727..4100758 | + | 1032 | WP_001197418.1 | L-idonate 5-dehydrogenase | - |
| H9206_RS19940 (4100782) | 4100782..4101546 | + | 765 | WP_000998700.1 | hypothetical protein | VF |
| H9206_RS19945 (4101611) | 4101611..4102930 | + | 1320 | WP_001128332.1 | gnt-II system L-idonate transporter | - |
| H9206_RS19950 (4102997) | 4102997..4103995 | + | 999 | WP_001348245.1 | DNA-binding transcriptional regulator IdnR | - |
| H9206_RS19955 (4104073) | 4104073..4105575 | + | 1503 | WP_001294563.1 | DUF853 domain-containing protein | - |
| H9206_RS19960 (4105736) | 4105736..4106818 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| H9206_RS19965 (4106818) | 4106818..4107918 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| H9206_RS19970 (4107981) | 4107981..4108031 | - | 51 | WP_211180521.1 | protein YtgA | - |
| H9206_RS19975 (4108185) | 4108185..4109696 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| H9206_RS19980 (4109957) | 4109957..4110400 | + | 444 | WP_000786397.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|