MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP060892 Location: 2379149..2391958 Organism: Escherichia coli strain EC22 Replicon: chromosome
Accession: NZ_CP060892 Location: 2379149..2391958 Organism: Escherichia coli strain EC22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9207_RS11500 (2375915) | 2375915..2377111 | - | 1197 | WP_039023277.1 | IS110-like element ISEc20 family transposase | - |
| H9207_RS11505 (2377319) | 2377319..2378926 | + | 1608 | Protein_2266 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H9207_RS11510 (2379149) | 2379149..2379415 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| H9207_RS11515 (2379415) | 2379415..2380737 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| H9207_RS11520 (2381049) | 2381049..2381257 | + | 209 | Protein_2269 | AraC family transcriptional regulator | - |
| H9207_RS11525 (2381512) | 2381512..2382738 | + | 1227 | Protein_2270 | Outer membrane usher protein FimD | VF |
| H9207_RS11530 (2382752) | 2382752..2383282 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| H9207_RS11535 (2383295) | 2383295..2383798 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| H9207_RS11540 (2383857) | 2383857..2384771 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| H9207_RS11545 (2385105) | 2385105..2387384 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| H9207_RS11550 (2387632) | 2387632..2387829 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| H9207_RS11555 (2387904) | 2387904..2388665 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| H9207_RS11560 (2389067) | 2389067..2390749 | + | 1683 | WP_001295684.1 | sulfatase | - |
| H9207_RS11565 (2390801) | 2390801..2391958 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| H9207_RS11570 (2391924) | 2391924..2392046 | - | 123 | WP_120795387.1 | protein YneP | - |
| H9207_RS11575 (2392249) | 2392249..2393934 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| H9207_RS11580 (2393972) | 2393972..2396344 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |