MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88670 bp
Accession: NZ_CP060886 Location: 1..88670 Organism: Escherichia coli strain EC24 Replicon: plasmid pEC24-2
Accession: NZ_CP060886 Location: 1..88670 Organism: Escherichia coli strain EC24 Replicon: plasmid pEC24-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9208_RS23520 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H9208_RS23525 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| H9208_RS23530 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| H9208_RS23535 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| H9208_RS23540 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| H9208_RS23545 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| H9208_RS23550 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| H9208_RS23555 (6210) | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| H9208_RS23560 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| H9208_RS23565 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| H9208_RS23570 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| H9208_RS23575 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| H9208_RS23580 (11604) | 11604..12539 | - | 936 | Protein_12 | IS66 family transposase ISEc22 | Transposase |
| H9208_RS23585 (12588) | 12588..12962 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| H9208_RS23590 (12987) | 12987..13691 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9208_RS23595 (13745) | 13745..14185 | - | 441 | Protein_15 | CatB-related O-acetyltransferase | - |
| H9208_RS23600 (14323) | 14323..15153 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| H9208_RS23605 (15284) | 15284..15838 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| H9208_RS23610 (15982) | 15982..16686 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9208_RS23615 (16752) | 16752..18266 | + | 1515 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9208_RS23620 (18308) | 18308..18550 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| H9208_RS23625 (18582) | 18582..19232 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9208_RS23630 (19338) | 19338..20537 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| H9208_RS23635 (20569) | 20569..21453 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| H9208_RS23640 (21591) | 21591..21983 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| H9208_RS23645 (21987) | 21987..22736 | + | 750 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9208_RS23650 (22760) | 22760..23365 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| H9208_RS23655 (23460) | 23460..26357 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| H9208_RS23660 (26494) | 26494..26895 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9208_RS23665 (26828) | 26828..27085 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9208_RS23670 (27178) | 27178..27831 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H9208_RS23675 (28770) | 28770..29627 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| H9208_RS23680 (29620) | 29620..29694 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| H9208_RS23685 (29929) | 29929..30186 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| H9208_RS23690 (30591) | 30591..31613 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| H9208_RS23695 (32085) | 32085..32438 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| H9208_RS23700 (32851) | 32851..33429 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| H9208_RS23705 (33462) | 33462..34159 | + | 698 | WP_223230354.1 | IS1 family transposase IS1A | Transposase |
| H9208_RS23710 (34274) | 34274..34630 | + | 357 | WP_000229735.1 | IS66 family transposase ISEc23 | Transposase |
| H9208_RS23715 (34627) | 34627..34977 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| H9208_RS23720 (35008) | 35008..35229 | + | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| H9208_RS23725 (35181) | 35181..35522 | + | 342 | Protein_41 | IS66 family transposase IS682 | Transposase |
| H9208_RS23730 (35586) | 35586..36065 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| H9208_RS23735 (36146) | 36146..37549 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| H9208_RS23740 (37597) | 37597..38601 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| H9208_RS23745 (38686) | 38686..39597 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| H9208_RS23750 (39608) | 39608..40828 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| H9208_RS23755 (41535) | 41535..42149 | + | 615 | Protein_47 | VENN motif pre-toxin domain-containing protein | - |
| H9208_RS23760 (42149) | 42149..42595 | - | 447 | Protein_48 | plasmid replication initiator RepA | - |
| H9208_RS23765 (42588) | 42588..42662 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| H9208_RS23770 (42898) | 42898..43155 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| H9208_RS23775 (43439) | 43439..43588 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (43632) | 43632..43693 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43632) | 43632..43693 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43632) | 43632..43693 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43632) | 43632..43693 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| H9208_RS23780 (43832) | 43832..44014 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| H9208_RS23785 (44115) | 44115..44731 | + | 617 | Protein_53 | IS1-like element IS1A family transposase | - |
| H9208_RS23790 (44769) | 44769..46340 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| H9208_RS23795 (46360) | 46360..46707 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| H9208_RS23800 (46707) | 46707..47384 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| H9208_RS23805 (47439) | 47439..47528 | + | 90 | Protein_57 | IS1 family transposase | - |
| H9208_RS23810 (47829) | 47829..48041 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| H9208_RS23815 (48175) | 48175..48735 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| H9208_RS23820 (48790) | 48790..49536 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| H9208_RS23825 (49556) | 49556..51796 | - | 2241 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| H9208_RS23830 (51893) | 51893..53073 | - | 1181 | Protein_62 | hydrolase | - |
| H9208_RS23835 (53125) | 53125..53355 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| H9208_RS23840 (53867) | 53867..54115 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| H9208_RS23845 (54387) | 54387..54578 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| H9208_RS23850 (54575) | 54575..54997 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| H9208_RS23855 (55044) | 55044..55469 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| H9208_RS23860 (55883) | 55883..56653 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| H9208_RS23865 (56698) | 56698..57216 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| H9208_RS23870 (57146) | 57146..57367 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| H9208_RS23875 (57368) | 57368..58051 | - | 684 | WP_032181561.1 | DNA methylase | - |
| H9208_RS23880 (58128) | 58128..58439 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| H9208_RS23885 (58436) | 58436..59338 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| H9208_RS23890 (60076) | 60076..61047 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H9208_RS23895 (61047) | 61047..62213 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| H9208_RS23900 (62801) | 62801..63556 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| H9208_RS23905 (64278) | 64278..65084 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| H9208_RS23910 (65085) | 65085..65390 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9208_RS23915 (65392) | 65392..65610 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| H9208_RS23920 (66170) | 66170..66400 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| H9208_RS23925 (66397) | 66397..66813 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9208_RS23930 (66888) | 66888..68453 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| H9208_RS23935 (68438) | 68438..69460 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| H9208_RS23945 (70937) | 70937..73138 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| H9208_RS23950 (73164) | 73164..74497 | - | 1334 | Protein_86 | L-lysine N6-monooxygenase | VF |
| H9208_RS23955 (74494) | 74494..76236 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| H9208_RS23960 (76236) | 76236..77183 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| H9208_RS23965 (77184) | 77184..78908 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| H9208_RS23970 (79044) | 79044..80237 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| H9208_RS23975 (80617) | 80617..80997 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| H9208_RS23980 (81338) | 81338..81751 | - | 414 | Protein_92 | phosphopyruvate hydratase | - |
| H9208_RS23985 (81749) | 81749..82006 | + | 258 | Protein_93 | Tn3 family transposase | - |
| H9208_RS23990 (82240) | 82240..83097 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| H9208_RS23995 (83094) | 83094..83951 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| H9208_RS24000 (83948) | 83948..84775 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| H9208_RS24005 (84775) | 84775..85689 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| H9208_RS24010 (86045) | 86045..86742 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| H9208_RS24015 (86922) | 86922..87435 | - | 514 | Protein_99 | DUF4113 domain-containing protein | - |
| H9208_RS24020 (87496) | 87496..87600 | - | 105 | Protein_100 | AAA family ATPase | - |
| H9208_RS24025 (87602) | 87602..87925 | - | 324 | Protein_101 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|