MGE detailed information
MGE type: Conjugative plasmid MGE length: 83754 bp
Accession: NZ_CP060881 Location: 1..83754 Organism: Escherichia coli strain EC26 Replicon: plasmid pEC26-2
Accession: NZ_CP060881 Location: 1..83754 Organism: Escherichia coli strain EC26 Replicon: plasmid pEC26-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9209_RS23535 (H9209_23295) | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| H9209_RS23540 (H9209_23300) | 1568..1726 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| H9209_RS23545 (H9209_23305) | 1781..2050 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| H9209_RS23550 (H9209_23310) | 2050..2328 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| H9209_RS23555 (H9209_23315) | 2524..2820 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| H9209_RS23560 (H9209_23320) | 3165..3752 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| H9209_RS23565 (H9209_23325) | 4034..4627 | - | 594 | WP_241424678.1 | ProQ/FINO family protein | - |
| H9209_RS23570 (H9209_23330) | 4981..6327 | + | 1347 | WP_001132021.1 | protein YagA | - |
| H9209_RS23575 (H9209_23335) | 6857..7159 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| H9209_RS23580 (H9209_23340) | 7156..7782 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H9209_RS23585 (H9209_23345) | 7994..9265 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| H9209_RS23590 (H9209_23350) | 9265..9702 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9209_RS23595 (H9209_23355) | 9699..9947 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9209_RS23600 (H9209_23360) | 10366..11268 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| H9209_RS23605 (H9209_23365) | 11272..11577 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| H9209_RS23610 (H9209_23370) | 11653..12336 | + | 684 | WP_001401756.1 | DNA methylase | - |
| H9209_RS23615 (H9209_23375) | 12337..12558 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| H9209_RS23620 (H9209_23380) | 12452..13006 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| H9209_RS23625 (H9209_23385) | 13051..13826 | + | 776 | Protein_18 | hypothetical protein | - |
| H9209_RS23630 (H9209_23390) | 14241..14666 | + | 426 | WP_001198874.1 | antirestriction protein | - |
| H9209_RS23635 (H9209_23395) | 14713..15135 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| H9209_RS23640 (H9209_23400) | 15132..15323 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| H9209_RS23645 (H9209_23405) | 15656..15724 | - | 69 | Protein_22 | pilus protein | - |
| H9209_RS23650 (H9209_23410) | 16093..16620 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| H9209_RS23655 (H9209_23415) | 16678..16911 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| H9209_RS23660 (H9209_23420) | 16970..18928 | + | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| H9209_RS23665 (H9209_23425) | 18983..19417 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| H9209_RS23670 (H9209_23430) | 19414..20133 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| H9209_RS23675 (H9209_23435) | 20130..20726 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| H9209_RS23680 (H9209_23440) | 21188..21688 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| H9209_RS23685 (H9209_23445) | 22421..22855 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| H9209_RS23690 (H9209_23450) | 22948..23214 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| H9209_RS23695 (H9209_23455) | 23391..23780 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H9209_RS23700 (H9209_23460) | 23777..24667 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| H9209_RS23705 (H9209_23465) | 24667..24912 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| H9209_RS23710 (H9209_23470) | 24943..25194 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| H9209_RS23715 (H9209_23480) | 25774..26622 | + | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| H9209_RS23720 (H9209_23485) | 26707..27042 | - | 336 | WP_241424679.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9209_RS23725 (H9209_23490) | 27275..27607 | + | 333 | WP_001291057.1 | plasmid mobilization protein MobA | - |
| H9209_RS23730 (H9209_23495) | 27619..30339 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| H9209_RS23735 (H9209_23500) | 30560..32860 | - | 2301 | WP_013307869.1 | F-type conjugative transfer protein TrbC | - |
| H9209_RS23740 (H9209_23505) | 32841..33965 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| H9209_RS23745 (H9209_23510) | 33962..35296 | - | 1335 | WP_001401765.1 | IncI1-type conjugal transfer protein TrbA | - |
| H9209_RS24995 | 36093..36188 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| H9209_RS23755 (H9209_23520) | 36251..36427 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| H9209_RS23760 (H9209_23525) | 36577..37044 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| H9209_RS23765 (H9209_23530) | 37203..37826 | + | 624 | WP_001155247.1 | helix-turn-helix domain-containing protein | - |
| H9209_RS23770 (H9209_23535) | 38024..38239 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| H9209_RS23775 (H9209_23540) | 38243..38611 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| H9209_RS23780 (H9209_23545) | 38902..39144 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| H9209_RS23785 (H9209_23550) | 39474..39626 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| H9209_RS23790 (H9209_23555) | 39764..41350 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| H9209_RS23795 (H9209_23560) | 41624..42277 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9209_RS23800 (H9209_23565) | 42365..44530 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| H9209_RS23805 (H9209_23570) | 44605..45174 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| H9209_RS23810 (H9209_23575) | 45171..46376 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| H9209_RS23815 (H9209_23580) | 46334..46954 | - | 621 | WP_102166911.1 | conjugal transfer protein TraV | - |
| H9209_RS23820 (H9209_23585) | 46954..49998 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| H9209_RS23825 (H9209_23590) | 50293..51111 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| H9209_RS25000 (H9209_23595) | 51026..51277 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| H9209_RS23835 (H9209_23600) | 51334..51732 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| H9209_RS23840 (H9209_23605) | 51779..52309 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| H9209_RS23845 (H9209_23610) | 52306..53019 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| H9209_RS23850 (H9209_23615) | 53016..54353 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| H9209_RS23855 (H9209_23620) | 54357..55331 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| H9209_RS23860 (H9209_23625) | 55342..56037 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| H9209_RS23865 (H9209_23630) | 56049..56399 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| H9209_RS23870 (H9209_23635) | 56416..60477 | - | 4062 | WP_013307874.1 | DUF5710 domain-containing protein | - |
| H9209_RS23875 (H9209_23640) | 60831..61412 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| H9209_RS23880 (H9209_23645) | 61644..61934 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| H9209_RS23885 (H9209_23650) | 61931..63079 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| H9209_RS23890 (H9209_23655) | 63063..63899 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| H9209_RS23895 (H9209_23660) | 63896..64354 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| H9209_RS23900 (H9209_23665) | 64458..65660 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| H9209_RS23905 (H9209_23670) | 65762..66583 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| H9209_RS23910 (H9209_23675) | 66796..67920 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| H9209_RS23915 (H9209_23680) | 67970..68278 | + | 309 | WP_102166912.1 | pilus assembly protein | - |
| H9209_RS25005 | 68466..68597 | + | 132 | WP_255639686.1 | hypothetical protein | - |
| H9209_RS23920 (H9209_23685) | 69173..69412 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| H9209_RS23925 (H9209_23690) | 69417..70778 | - | 1362 | WP_021532399.1 | hypothetical protein | VF |
| H9209_RS23930 (H9209_23695) | 70796..71422 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| H9209_RS23935 (H9209_23700) | 71438..71923 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| H9209_RS23940 (H9209_23705) | 71968..72504 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| H9209_RS23945 (H9209_23710) | 72566..73660 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9209_RS23950 (H9209_23715) | 73662..75170 | - | 1509 | WP_102166913.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9209_RS23955 (H9209_23720) | 75273..75731 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| H9209_RS23960 (H9209_23725) | 75721..77016 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| H9209_RS23965 (H9209_23730) | 77037..78656 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| H9209_RS23970 (H9209_23735) | 78688..79125 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| H9209_RS23975 (H9209_23740) | 79129..80199 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| H9209_RS23980 (H9209_23745) | 80440..80760 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| H9209_RS23985 (H9209_23750) | 80876..81118 | - | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| H9209_RS23990 (H9209_23755) | 81199..81342 | - | 144 | WP_000176500.1 | hypothetical protein | - |
| H9209_RS23995 (H9209_23760) | 81609..82271 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| H9209_RS24000 (H9209_23765) | 82411..82917 | - | 507 | WP_005082529.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|