MGE detailed information
MGE type: Prophage MGE length: 63491 bp
Accession: NZ_CP060880 Location: 2306755..2370245 Organism: Escherichia coli strain EC26 Replicon: chromosome
Accession: NZ_CP060880 Location: 2306755..2370245 Organism: Escherichia coli strain EC26 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9209_RS11190 (2302654) | 2302654..2303874 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| H9209_RS11195 (2303999) | 2303999..2304694 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| H9209_RS11200 (2304647) | 2304647..2305939 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| H9209_RS11205 (2306098) | 2306098..2306712 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| H9209_RS11210 (2306755) | 2306755..2307609 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| H9209_RS11215 (2307611) | 2307611..2308228 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| H9209_RS11220 (2308239) | 2308239..2310662 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9209_RS11225 (2310723) | 2310723..2313149 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| H9209_RS11230 (2313348) | 2313348..2313653 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H9209_RS11235 (2313761) | 2313761..2314471 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H9209_RS11240 (2314474) | 2314474..2315034 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H9209_RS11245 (2315069) | 2315069..2315410 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H9209_RS11250 (2315545) | 2315545..2315871 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| H9209_RS11255 (2316077) | 2316077..2317271 | + | 1195 | Protein_2208 | starvation-sensing protein RspA | - |
| H9209_RS11260 (2317283) | 2317283..2318302 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H9209_RS11265 (2318490) | 2318490..2319770 | - | 1281 | WP_000876958.1 | site-specific integrase | - |
| H9209_RS11270 (2319805) | 2319805..2320056 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| H9209_RS11275 (2320129) | 2320129..2322600 | - | 2472 | Protein_2212 | 3'-5' exoribonuclease | - |
| H9209_RS11280 (2322693) | 2322693..2322884 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| H9209_RS11285 (2322881) | 2322881..2323069 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H9209_RS11290 (2323637) | 2323637..2323855 | - | 219 | WP_001171942.1 | protein YdfC | - |
| H9209_RS24915 (2323885) | 2323885..2324013 | - | 129 | WP_000344964.1 | protein YdfB | - |
| H9209_RS11295 (2324015) | 2324015..2324170 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| H9209_RS11300 (2324337) | 2324337..2324744 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| H9209_RS11305 (2324828) | 2324828..2325058 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| H9209_RS11310 (2325042) | 2325042..2325563 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| H9209_RS11315 (2325544) | 2325544..2326509 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| H9209_RS11320 (2326550) | 2326550..2326972 | + | 423 | WP_241424675.1 | DUF977 family protein | - |
| H9209_RS11325 (2326969) | 2326969..2327458 | + | 490 | Protein_2223 | class I SAM-dependent methyltransferase | - |
| H9209_RS11330 (2327841) | 2327841..2329380 | - | 1540 | Protein_2224 | IS66-like element ISEc22 family transposase | - |
| H9209_RS11335 (2329429) | 2329429..2329776 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9209_RS11340 (2329773) | 2329773..2330177 | - | 405 | WP_000839179.1 | transposase | - |
| H9209_RS11345 (2330399) | 2330399..2330820 | + | 422 | Protein_2227 | hypothetical protein | - |
| H9209_RS11350 (2331476) | 2331476..2332498 | + | 1023 | Protein_2228 | ISNCY family transposase | - |
| H9209_RS11355 (2332619) | 2332619..2332768 | + | 150 | WP_011443592.1 | protein YdfW | - |
| H9209_RS11360 (2333205) | 2333205..2333537 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| H9209_RS11365 (2333740) | 2333740..2334045 | - | 306 | WP_001326990.1 | protein YdfV | - |
| H9209_RS11370 (2334070) | 2334070..2334309 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H9209_RS11375 (2334309) | 2334309..2334596 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H9209_RS11380 (2334668) | 2334668..2334823 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H9209_RS11385 (2335040) | 2335040..2335291 | + | 252 | WP_000980994.1 | protein Rem | - |
| H9209_RS11390 (2335358) | 2335358..2335636 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| H9209_RS11395 (2335638) | 2335638..2336687 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H9209_RS11400 (2336701) | 2336701..2337171 | + | 471 | Protein_2238 | antitermination protein | - |
| H9209_RS11405 (2337226) | 2337226..2337923 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| H9209_RS11410 (2337937) | 2337937..2338041 | - | 105 | Protein_2240 | putative zinc-binding protein YnfU | - |
| H9209_RS11415 (2338261) | 2338261..2338476 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H9209_RS11420 (2338481) | 2338481..2338792 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| H9209_RS11425 (2338789) | 2338789..2339322 | + | 534 | WP_001092971.1 | lysozyme | - |
| H9209_RS11430 (2339319) | 2339319..2339816 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H9209_RS11435 (2340179) | 2340179..2340391 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H9209_RS11440 (2340402) | 2340402..2340590 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| H9209_RS11445 (2340593) | 2340593..2340658 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| H9209_RS11450 (2340663) | 2340663..2340893 | + | 231 | WP_000720962.1 | protein YnfN | - |
| H9209_RS11455 (2341065) | 2341065..2341238 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H9209_RS11460 (2341390) | 2341390..2341800 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H9209_RS11465 (2341858) | 2341858..2342091 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H9209_RS11470 (2342480) | 2342480..2343025 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H9209_RS11475 (2343000) | 2343000..2344925 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| H9209_RS11480 (2344922) | 2344922..2345128 | + | 207 | WP_000198149.1 | gpW family protein | - |
| H9209_RS11485 (2345125) | 2345125..2346726 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| H9209_RS11490 (2346707) | 2346707..2348026 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| H9209_RS11495 (2348036) | 2348036..2348368 | + | 333 | WP_001295978.1 | head decoration protein | - |
| H9209_RS11500 (2348425) | 2348425..2349450 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| H9209_RS11505 (2349492) | 2349492..2349890 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| H9209_RS11510 (2349902) | 2349902..2350255 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| H9209_RS11515 (2350267) | 2350267..2350845 | + | 579 | WP_000975070.1 | phage tail protein | - |
| H9209_RS11520 (2350842) | 2350842..2351237 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| H9209_RS11525 (2351245) | 2351245..2351985 | + | 741 | WP_001349920.1 | phage tail protein | - |
| H9209_RS11530 (2352001) | 2352001..2352423 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| H9209_RS11535 (2352405) | 2352405..2352839 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| H9209_RS11540 (2352832) | 2352832..2355393 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| H9209_RS11545 (2355390) | 2355390..2355719 | + | 330 | WP_000847379.1 | phage tail protein | - |
| H9209_RS11550 (2355719) | 2355719..2356417 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| H9209_RS11555 (2356423) | 2356423..2357166 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| H9209_RS11560 (2357163) | 2357163..2357735 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| H9209_RS11565 (2357796) | 2357796..2361293 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| H9209_RS11570 (2361363) | 2361363..2361962 | + | 600 | WP_001230375.1 | Ail/Lom family protein | - |
| H9209_RS11575 (2362027) | 2362027..2363694 | + | 1668 | Protein_2273 | prophage tail fiber N-terminal domain-containing protein | - |
| H9209_RS11585 (2365514) | 2365514..2366362 | + | 849 | WP_000127649.1 | phage tail protein | - |
| H9209_RS11590 (2366362) | 2366362..2366937 | + | 576 | WP_241424676.1 | tail fiber assembly protein | - |
| H9209_RS11595 (2367035) | 2367035..2367625 | - | 591 | WP_000078177.1 | recombinase family protein | - |
| H9209_RS11600 (2367942) | 2367942..2368175 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H9209_RS11605 (2368244) | 2368244..2368357 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| H9209_RS11610 (2368878) | 2368878..2370245 | + | 1368 | Protein_2280 | MHS family MFS transporter | - |
| H9209_RS11615 (2370334) | 2370334..2371794 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H9209_RS11620 (2371829) | 2371829..2372032 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H9209_RS11625 (2372209) | 2372209..2372895 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| H9209_RS11630 (2372984) | 2372984..2373730 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|