MGE detailed information
MGE type: Genomic_island MGE length: 42830 bp
Accession: NZ_CP060818 Location: 840269..883098 Organism: Pantoea ananatis strain Lstri Replicon: chromosome
Accession: NZ_CP060818 Location: 840269..883098 Organism: Pantoea ananatis strain Lstri Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAQ00_RS04040 (IAQ00_04025) | 835613..836161 | + | 549 | WP_252294276.1 | pili assembly chaperone | - |
| IAQ00_RS04045 (IAQ00_04030) | 836335..837324 | + | 990 | WP_252294278.1 | conjugal transfer protein TraE | - |
| IAQ00_RS04050 (IAQ00_04035) | 837416..838624 | + | 1209 | WP_081046452.1 | conjugal transfer protein TraF | - |
| IAQ00_RS04055 (IAQ00_04040) | 838678..839232 | + | 555 | WP_064366690.1 | hypothetical protein | - |
| IAQ00_RS04060 (IAQ00_04045) | 839710..840868 | - | 1159 | Protein_789 | IS30 family transposase ISCfr4 | Transposase |
| IAQ00_RS04065 (IAQ00_04050) | 841456..841686 | + | 231 | WP_028724117.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IAQ00_RS04070 (IAQ00_04055) | 841710..842108 | + | 399 | WP_033778077.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IAQ00_RS04075 (IAQ00_04060) | 842335..843210 | - | 876 | WP_252294280.1 | N-acetylmuramoyl-L-alanine amidase | - |
| IAQ00_RS04080 (IAQ00_04065) | 843240..843521 | - | 282 | WP_028724120.1 | LuxR C-terminal-related transcriptional regulator | - |
| IAQ00_RS04085 (IAQ00_04070) | 843930..844487 | + | 558 | WP_252294282.1 | hypothetical protein | VF |
| IAQ00_RS04090 (IAQ00_04075) | 844550..845221 | + | 672 | WP_221611350.1 | hypothetical protein | VF |
| IAQ00_RS04095 (IAQ00_04080) | 845290..847785 | + | 2496 | WP_162150529.1 | hypothetical protein | VF |
| IAQ00_RS04100 (IAQ00_04085) | 847782..848765 | + | 984 | WP_028724124.1 | fimbrial protein | - |
| IAQ00_RS04105 (IAQ00_04090) | 848758..849276 | + | 519 | WP_071994886.1 | hypothetical protein | VF |
| IAQ00_RS04110 (IAQ00_04095) | 849469..850365 | - | 897 | WP_071994887.1 | hypothetical protein | VF |
| IAQ00_RS04115 (IAQ00_04100) | 850867..851455 | + | 589 | Protein_800 | helix-turn-helix domain-containing protein | - |
| IAQ00_RS04120 | 851635..851790 | - | 156 | WP_252294283.1 | hypothetical protein | - |
| IAQ00_RS04125 | 851899..852474 | - | 576 | WP_252294285.1 | amidohydrolase family protein | - |
| IAQ00_RS04130 (IAQ00_04110) | 853988..854332 | + | 345 | WP_033778078.1 | hypothetical protein | - |
| IAQ00_RS04135 (IAQ00_04115) | 854545..854934 | - | 390 | Protein_804 | integrase core domain-containing protein | - |
| IAQ00_RS04140 | 855046..855570 | + | 525 | Protein_805 | IS3 family transposase ISAs9 | Transposase |
| IAQ00_RS04145 (IAQ00_04130) | 855553..855836 | - | 284 | Protein_806 | IS3 family transposase IS1400 | Transposase |
| IAQ00_RS04150 | 855923..856120 | + | 198 | Protein_807 | IS5/IS1182 family transposase | - |
| IAQ00_RS04155 (IAQ00_04135) | 856192..856467 | - | 276 | WP_080687761.1 | LuxR C-terminal-related transcriptional regulator | - |
| IAQ00_RS04160 | 856733..856910 | - | 178 | Protein_809 | YadA C-terminal domain-containing protein | - |
| IAQ00_RS04165 (IAQ00_04145) | 856985..857362 | - | 378 | WP_155301450.1 | hypothetical protein | - |
| IAQ00_RS04170 (IAQ00_04150) | 857740..858591 | - | 852 | WP_050598419.1 | hypothetical protein | VF |
| IAQ00_RS04175 (IAQ00_04155) | 859006..859320 | + | 315 | Protein_812 | transposase | - |
| IAQ00_RS04180 (IAQ00_04160) | 859593..860192 | - | 600 | WP_028724130.1 | nitroreductase family protein | - |
| IAQ00_RS04185 (IAQ00_04165) | 860444..863008 | - | 2565 | WP_252294287.1 | hypothetical protein | VF |
| IAQ00_RS04190 (IAQ00_04170) | 863368..863583 | + | 216 | WP_028724132.1 | IS66 family transposase ISCro1 | Transposase |
| IAQ00_RS04195 (IAQ00_04180) | 864701..865117 | + | 417 | WP_028724133.1 | hypothetical protein | - |
| IAQ00_RS04200 (IAQ00_04185) | 865300..866076 | - | 777 | WP_028724134.1 | N-acetylmuramoyl-L-alanine amidase | - |
| IAQ00_RS04205 (IAQ00_04190) | 866511..867108 | + | 598 | Protein_818 | IS66 family transposase ISSfl3 | Transposase |
| IAQ00_RS04210 (IAQ00_04195) | 867114..868151 | + | 1038 | Protein_819 | IS66 family transposase ISCro1 | Transposase |
| IAQ00_RS04215 (IAQ00_04200) | 868464..869330 | + | 867 | WP_239642694.1 | MBL fold metallo-hydrolase | - |
| IAQ00_RS04220 (IAQ00_04205) | 869384..869908 | + | 525 | WP_028724137.1 | phenolic acid decarboxylase | - |
| IAQ00_RS04225 (IAQ00_04210) | 870212..870663 | + | 452 | Protein_822 | IS66 family transposase ISCro1 | Transposase |
| IAQ00_RS04230 (IAQ00_04215) | 871159..872151 | - | 993 | WP_252294289.1 | LysR family transcriptional regulator | - |
| IAQ00_RS04235 (IAQ00_04220) | 872509..873645 | + | 1137 | WP_252294963.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| IAQ00_RS04240 (IAQ00_04225) | 873718..877944 | + | 4227 | WP_252294291.1 | hypothetical protein | VF |
| IAQ00_RS04245 (IAQ00_04230) | 878085..878248 | + | 164 | Protein_826 | TraR/DksA family transcriptional regulator | - |
| IAQ00_RS04250 (IAQ00_04235) | 878268..879189 | + | 922 | Protein_827 | IS3 family transposase | - |
| IAQ00_RS04255 | 879454..879697 | + | 244 | Protein_828 | transposase | - |
| IAQ00_RS04260 (IAQ00_04240) | 879852..880865 | + | 1014 | WP_050598421.1 | LysR family transcriptional regulator | - |
| IAQ00_RS04265 (IAQ00_04245) | 881109..881367 | - | 259 | Protein_830 | IS3 family transposase IS1400 | Transposase |
| IAQ00_RS04275 (IAQ00_04250) | 882262..883098 | + | 837 | Protein_831 | conjugal transfer protein TraE | - |
| IAQ00_RS04280 (IAQ00_04255) | 883190..884398 | + | 1209 | WP_081046452.1 | conjugal transfer protein TraF | - |
| IAQ00_RS04285 (IAQ00_04260) | 884452..885006 | + | 555 | WP_252294295.1 | hypothetical protein | - |
| IAQ00_RS04290 (IAQ00_04265) | 885885..887537 | + | 1653 | WP_014606060.1 | methyl-accepting chemotaxis protein | - |
| IAQ00_RS04295 | 887901..888068 | + | 168 | Protein_835 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|