MGE detailed information
MGE type: Conjugative plasmid MGE length: 68439 bp
Accession: NZ_CP060753 Location: 1..68439 Organism: Escherichia coli strain EC96 Replicon: plasmid pEC96-CTX-M-215
Accession: NZ_CP060753 Location: 1..68439 Organism: Escherichia coli strain EC96 Replicon: plasmid pEC96-CTX-M-215
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAI02_RS23805 () | 312..566 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| IAI02_RS23810 () | 805..879 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IAI02_RS23815 () | 872..1729 | + | 858 | WP_000130988.1 | incFII family plasmid replication initiator RepA | - |
| IAI02_RS23820 () | 2429..2569 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| IAI02_RS23825 () | 2667..3320 | + | 654 | WP_000616800.1 | CPBP family intramembrane metalloprotease | - |
| IAI02_RS23830 () | 3413..3670 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| IAI02_RS23835 () | 3603..4004 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| IAI02_RS23840 () | 4289..6061 | + | 1773 | WP_100038971.1 | DUF262 domain-containing protein | - |
| IAI02_RS23845 () | 6681..6986 | + | 306 | WP_001152000.1 | hypothetical protein | - |
| IAI02_RS23850 () | 6997..7231 | + | 235 | Protein_9 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IAI02_RS23855 () | 7359..7640 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| IAI02_RS23860 () | 7763..8113 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| IAI02_RS23865 () | 8116..9078 | - | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| IAI02_RS23870 () | 9217..9517 | + | 301 | Protein_13 | hypothetical protein | - |
| IAI02_RS23875 () | 9593..10276 | + | 684 | WP_073520024.1 | DNA methylase | - |
| IAI02_RS23880 () | 10277..10498 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IAI02_RS23885 () | 10512..10946 | + | 435 | WP_000274484.1 | DUF1380 family protein | - |
| IAI02_RS23890 () | 10991..11161 | + | 171 | WP_187475413.1 | hypothetical protein | - |
| IAI02_RS23895 () | 11276..12475 | - | 1200 | WP_187475412.1 | IS91 family transposase ISSbo1 | Transposase |
| IAI02_RS23900 () | 12485..12673 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| IAI02_RS23905 () | 12789..12866 | + | 78 | Protein_20 | GTPase | - |
| IAI02_RS23910 () | 13405..13707 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| IAI02_RS23915 () | 13754..14176 | + | 423 | WP_000271681.1 | DUF1380 family protein | - |
| IAI02_RS23920 () | 14173..14364 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| IAI02_RS23925 () | 14334..14884 | - | 551 | Protein_24 | hypothetical protein | - |
| IAI02_RS23930 () | 15402..15632 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IAI02_RS23935 () | 15684..17045 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| IAI02_RS23940 () | 17093..17656 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| IAI02_RS23945 () | 18282..18488 | + | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| IAI02_RS23950 () | 18514..18966 | + | 453 | WP_181695943.1 | single-stranded DNA-binding protein | - |
| IAI02_RS23955 () | 19029..19262 | + | 234 | WP_087086828.1 | DUF905 family protein | - |
| IAI02_RS23960 () | 19328..21286 | + | 1959 | WP_099357091.1 | ParB/RepB/Spo0J family partition protein | - |
| IAI02_RS23965 () | 21341..21775 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| IAI02_RS23970 () | 21772..22491 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| IAI02_RS23975 () | 22503..22691 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 22503..22727 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22503..22727 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22503..22727 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22503..22727 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22660..22725 | - | 66 | - | - | Antitoxin Detail |
| IAI02_RS23980 () | 22771..22929 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IAI02_RS23985 () | 23850..24137 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| IAI02_RS23990 () | 24255..25076 | + | 822 | WP_073520018.1 | DUF945 domain-containing protein | - |
| IAI02_RS23995 () | 25373..26020 | - | 648 | WP_000614935.1 | hypothetical protein | VF |
| IAI02_RS24000 () | 26297..26680 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| IAI02_RS24005 () | 26871..27557 | + | 687 | WP_073520017.1 | PAS domain-containing protein | - |
| IAI02_RS24010 () | 27651..27878 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| IAI02_RS24015 () | 27912..28277 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| IAI02_RS24020 () | 28292..28603 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IAI02_RS24025 () | 28625..29191 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IAI02_RS24030 () | 29202..29906 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IAI02_RS24035 () | 29906..31333 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| IAI02_RS24040 () | 31323..31895 | + | 573 | WP_024179131.1 | conjugal transfer protein TraP | - |
| IAI02_RS24045 () | 31892..32212 | + | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| IAI02_RS24050 () | 32205..32456 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| IAI02_RS24055 () | 32453..32968 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IAI02_RS24060 () | 33103..33324 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IAI02_RS24065 () | 33484..36111 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| IAI02_RS24070 () | 36108..36494 | + | 387 | WP_029400173.1 | type-F conjugative transfer system protein TrbI | - |
| IAI02_RS24075 () | 36491..37123 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| IAI02_RS24080 () | 37120..38112 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| IAI02_RS24085 () | 38138..38599 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| IAI02_RS24090 () | 38629..39081 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| IAI02_RS24095 () | 39109..39747 | + | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IAI02_RS24100 () | 39744..41552 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IAI02_RS24105 () | 41579..41836 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| IAI02_RS24110 () | 41829..42572 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IAI02_RS24115 () | 42588..42935 | + | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| IAI02_RS24120 () | 43054..43338 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IAI02_RS24125 () | 43325..43870 | + | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IAI02_RS24130 () | 43800..44162 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| IAI02_RS24135 () | 44162..45535 | + | 1374 | WP_173670398.1 | conjugal transfer protein TraH | - |
| IAI02_RS24140 () | 45532..48357 | + | 2826 | WP_187476167.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IAI02_RS24145 () | 48354..48863 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IAI02_RS24150 () | 48877..49608 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| IAI02_RS24155 () | 49861..52077 | + | 2217 | WP_187475411.1 | type IV conjugative transfer system coupling protein TraD | - |
| IAI02_RS24160 () | 52077..57347 | + | 5271 | WP_114213848.1 | Multifunctional conjugation protein TraI | Relaxase |
| IAI02_RS24165 () | 57367..58113 | + | 747 | WP_086660525.1 | conjugal transfer pilus acetylase TraX | - |
| IAI02_RS24170 () | 58167..58727 | + | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| IAI02_RS24175 () | 58863..59069 | + | 207 | WP_072656937.1 | ANR family transcriptional regulator | - |
| IAI02_RS24180 () | 59593..60573 | - | 981 | WP_187475320.1 | IS5 family transposase ISKpn26 | Transposase |
| IAI02_RS24185 () | 60836..61711 | + | 876 | WP_128268235.1 | Beta-lactamase Toho-1 | ARG |
| IAI02_RS24190 () | 61746..62714 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| IAI02_RS24195 () | 62771..63868 | + | 1098 | Protein_78 | TonB-dependent receptor | - |
| IAI02_RS24200 () | 63936..64472 | - | 537 | Protein_79 | PAS domain-containing protein | - |
| IAI02_RS24205 () | 64782..65342 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IAI02_RS24210 () | 65346..68312 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|