MGE detailed information
MGE type: Mobilizable plasmid MGE length: 32368 bp
Accession: NZ_CP060752 Location: 1..32368 Organism: Escherichia coli strain EC96 Replicon: plasmid pEC96-32kb
Accession: NZ_CP060752 Location: 1..32368 Organism: Escherichia coli strain EC96 Replicon: plasmid pEC96-32kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAI02_RS23630 () | 675..1388 | - | 714 | WP_012457107.1 | hypothetical protein | - |
| IAI02_RS23635 () | 1840..2199 | - | 360 | WP_012457108.1 | helix-turn-helix domain-containing protein | - |
| IAI02_RS23640 () | 2453..2908 | + | 456 | WP_009309974.1 | transcriptional antiterminator NusG | - |
| IAI02_RS23645 () | 2980..3195 | + | 216 | WP_004178170.1 | hypothetical protein | - |
| IAI02_RS23650 () | 3200..3418 | + | 219 | WP_032722781.1 | hypothetical protein | - |
| IAI02_RS23655 () | 3536..4246 | + | 711 | WP_004178175.1 | Type IV secretion system protein virB1 | VF |
| IAI02_RS23660 () | 4243..4548 | + | 306 | WP_012457109.1 | Type IV secretion system protein virB2 | VF |
| IAI02_RS23665 () | 4561..7299 | + | 2739 | WP_012457110.1 | Type IV secretion system protein virB4 | VF |
| IAI02_RS23670 () | 7318..8028 | + | 711 | WP_012457111.1 | type IV secretion system protein | - |
| IAI02_RS23675 () | 8038..8265 | + | 228 | WP_004178109.1 | EexN family lipoprotein | - |
| IAI02_RS23680 () | 8277..9353 | + | 1077 | WP_012457112.1 | type IV secretion system protein | - |
| IAI02_RS23685 () | 9575..10258 | + | 684 | WP_094309417.1 | Type IV secretion system protein PtlE | VF |
| IAI02_RS23690 () | 10255..11163 | + | 909 | WP_012457114.1 | P-type conjugative transfer protein VirB9 | - |
| IAI02_RS23695 () | 11210..12478 | + | 1269 | WP_139968916.1 | Type IV secretion system protein virB10 | VF |
| IAI02_RS23700 () | 12468..13493 | + | 1026 | WP_012457116.1 | Type IV secretion system protein VirB11 | VF |
| IAI02_RS23705 () | 13490..13888 | + | 399 | WP_012457117.1 | cag pathogenicity island Cag12 family protein | - |
| IAI02_RS23710 () | 13924..14229 | + | 306 | WP_012457118.1 | hypothetical protein | - |
| IAI02_RS23715 () | 14263..14568 | + | 306 | WP_094309429.1 | dpoa decarboxylase | - |
| IAI02_RS23720 () | 15349..17085 | + | 1737 | WP_094309419.1 | type IV secretion system DNA-binding domain-containing protein | - |
| IAI02_RS23725 () | 17094..17849 | + | 756 | WP_023316386.1 | hypothetical protein | - |
| IAI02_RS23730 () | 17952..18482 | + | 531 | WP_012457122.1 | Phospholipase D | VF |
| IAI02_RS23735 () | 18666..19634 | - | 969 | WP_012457123.1 | DUF1738 domain-containing protein | - |
| IAI02_RS23740 () | 20019..20684 | + | 666 | WP_094309421.1 | hypothetical protein | - |
| IAI02_RS23745 () | 20732..21004 | - | 273 | WP_187476165.1 | hypothetical protein | - |
| IAI02_RS23750 () | 21058..21357 | - | 300 | WP_012457126.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| IAI02_RS23755 () | 21360..21710 | - | 351 | WP_012457127.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IAI02_RS23760 () | 22104..22721 | + | 618 | WP_012457128.1 | ParA family protein | - |
| IAI02_RS23765 () | 22776..23015 | + | 240 | WP_012457129.1 | ParG | - |
| IAI02_RS23770 () | 23634..24890 | - | 1257 | WP_117061474.1 | GIY-YIG nuclease family protein | - |
| IAI02_RS23775 () | 24894..26912 | - | 2019 | WP_117061475.1 | ATP-dependent helicase | - |
| IAI02_RS23780 () | 26952..29618 | - | 2667 | WP_187476166.1 | class I SAM-dependent DNA methyltransferase | - |
| IAI02_RS23785 () | 29710..29898 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| IAI02_RS23790 () | 29908..31107 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| IAI02_RS23795 () | 31587..31868 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| IAI02_RS23800 () | 31849..32178 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|