MGE detailed information
MGE type: Genomic_island MGE length: 22270 bp
Accession: NZ_CP060709 Location: 3428131..3450400 Organism: Escherichia coli strain ST18 Replicon: chromosome
Accession: NZ_CP060709 Location: 3428131..3450400 Organism: Escherichia coli strain ST18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9445_RS16885 () | 3423963..3425294 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| H9445_RS16890 () | 3425316..3426305 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| H9445_RS16895 () | 3426404..3427342 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| H9445_RS16900 () | 3427531..3427875 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| H9445_RS16905 () | 3428131..3428670 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| H9445_RS16910 () | 3428692..3429879 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| H9445_RS16920 () | 3430902..3432047 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| H9445_RS16925 () | 3432144..3433034 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| H9445_RS16930 () | 3433064..3433834 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| H9445_RS16935 () | 3433850..3435184 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| H9445_RS16940 () | 3435559..3437130 | + | 1572 | WP_001273747.1 | galactarate dehydratase | - |
| H9445_RS16945 () | 3437279..3437614 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| H9445_RS16950 () | 3437614..3438078 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| H9445_RS16955 () | 3438133..3438942 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| H9445_RS16960 () | 3439191..3440471 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| H9445_RS16965 () | 3440494..3440967 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H9445_RS16970 () | 3440978..3441349 | + | 372 | Protein_3321 | PTS sugar transporter subunit IIC | - |
| H9445_RS16975 () | 3441345..3441902 | + | 558 | Protein_3322 | amidohydrolase family protein | - |
| H9445_RS16980 () | 3442253..3443407 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| H9445_RS16985 () | 3443420..3444280 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| H9445_RS16990 () | 3444447..3444923 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H9445_RS16995 () | 3444962..3445765 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| H9445_RS17000 () | 3445755..3446546 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| H9445_RS17005 () | 3446547..3447302 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| H9445_RS17010 () | 3447703..3448287 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| H9445_RS17015 () | 3448367..3448495 | + | 129 | Protein_3330 | molecular chaperone | - |
| H9445_RS17020 () | 3448511..3449719 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| H9445_RS17025 () | 3449828..3450400 | + | 573 | Protein_3332 | hypothetical protein | VF |
| H9445_RS17030 () | 3450429..3452945 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| H9445_RS17035 () | 3452956..3454047 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| H9445_RS17040 () | 3454090..3454950 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|