MGE detailed information
MGE type: Prophage MGE length: 50503 bp
Accession: NZ_CP060709 Location: 1544993..1595495 Organism: Escherichia coli strain ST18 Replicon: chromosome
Accession: NZ_CP060709 Location: 1544993..1595495 Organism: Escherichia coli strain ST18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9445_RS07825 () | 1540206..1540994 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| H9445_RS07830 () | 1541004..1542059 | + | 1056 | WP_001395397.1 | Gfo/Idh/MocA family oxidoreductase | - |
| H9445_RS07835 () | 1542056..1544323 | + | 2268 | WP_000198036.1 | kojibiose phosphorylase | - |
| H9445_RS07840 () | 1544320..1544979 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| H9445_RS07845 () | 1544993..1546074 | + | 1082 | Protein_1535 | hypothetical protein | VF |
| H9445_RS07850 () | 1546119..1547024 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| H9445_RS07855 () | 1547135..1548133 | - | 999 | WP_000075375.1 | LacI family transcriptional regulator | - |
| H9445_RS07860 () | 1548289..1549686 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| H9445_RS07865 () | 1549683..1550744 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| H9445_RS07870 () | 1550892..1552433 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| H9445_RS07875 () | 1552477..1552983 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| H9445_RS07880 () | 1553102..1554067 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| H9445_RS07885 () | 1554042..1554770 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| H9445_RS07890 () | 1554897..1555034 | - | 138 | Protein_1544 | NAD-dependent dehydratase | - |
| H9445_RS07895 () | 1555040..1555105 | - | 66 | WP_120795383.1 | uncharacterized protein YmjD | - |
| H9445_RS07900 () | 1555105..1556025 | - | 921 | WP_001300523.1 | alpha/beta hydrolase | - |
| H9445_RS07905 () | 1556163..1557062 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| H9445_RS07910 () | 1557399..1559012 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| H9445_RS07915 () | 1559063..1560094 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| H9445_RS07920 () | 1560248..1561264 | + | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| H9445_RS07925 () | 1561542..1562057 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| H9445_RS07930 () | 1562068..1563594 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| H9445_RS07935 () | 1563631..1565076 | - | 1446 | Protein_1553 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| H9445_RS07940 () | 1565076..1566386 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| H9445_RS07945 () | 1566562..1567470 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| H9445_RS07950 () | 1567800..1568363 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| H9445_RS07955 () | 1568384..1569616 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| H9445_RS07960 () | 1569871..1570854 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| H9445_RS07965 () | 1571332..1572705 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| H9445_RS07970 () | 1572834..1573769 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| H9445_RS07975 () | 1573821..1575056 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| H9445_RS07980 () | 1575058..1575273 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| H9445_RS07985 () | 1575352..1575561 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1575377..1575555 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1575377..1575555 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1575377..1575555 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1575377..1575555 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| H9445_RS07990 () | 1575554..1575748 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| H9445_RS07995 () | 1575805..1576614 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| H9445_RS08000 () | 1576607..1579207 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| H9445_RS08005 () | 1579309..1579584 | - | 276 | WP_000632297.1 | protein RacC | - |
| H9445_RS08010 () | 1579659..1579829 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| H9445_RS08015 () | 1579829..1580050 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| H9445_RS08020 () | 1580492..1580980 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| H9445_RS08025 () | 1580977..1581132 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| H9445_RS08030 () | 1581586..1582062 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| H9445_RS08035 () | 1582186..1582482 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| H9445_RS08040 () | 1582505..1582927 | + | 423 | WP_000693797.1 | phage protein | - |
| H9445_RS08045 () | 1582940..1583797 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| H9445_RS08050 () | 1583804..1584550 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| H9445_RS08055 () | 1584573..1585133 | + | 561 | WP_000450663.1 | DUF1627 domain-containing protein | - |
| H9445_RS08060 () | 1585221..1585406 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| H9445_RS08065 () | 1585603..1587060 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| H9445_RS08070 () | 1587198..1587461 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| H9445_RS08075 () | 1587442..1587801 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| H9445_RS08080 () | 1588275..1589207 | + | 933 | Protein_1582 | phage tail length tape measure family protein | - |
| H9445_RS08085 () | 1589210..1589425 | + | 216 | Protein_1583 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9445_RS08090 () | 1589567..1590547 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| H9445_RS08095 () | 1590617..1590805 | + | 189 | Protein_1585 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9445_RS08100 () | 1590870..1594232 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H9445_RS08105 () | 1594232..1594807 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| H9445_RS08110 () | 1594905..1595495 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9445_RS08115 () | 1595812..1596045 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| H9445_RS08120 () | 1596114..1596227 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| H9445_RS08125 () | 1597006..1597440 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| H9445_RS08130 () | 1597581..1598714 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|