MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 119726 bp
Accession: NZ_CP060700 Location: 2197946..2317671 Organism: Staphylococcus pseudintermedius strain cdc 18-1182 Replicon: chromosome
Accession: NZ_CP060700 Location: 2197946..2317671 Organism: Staphylococcus pseudintermedius strain cdc 18-1182 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q12_RS10380 () | 2193978..2194268 | + | 291 | WP_037541931.1 | lactococcin 972 family bacteriocin | - |
| H9Q12_RS10385 () | 2194294..2196261 | + | 1968 | WP_037541930.1 | DUF1430 domain-containing protein | - |
| H9Q12_RS10390 () | 2196265..2196594 | + | 330 | WP_037541929.1 | YxeA family protein | - |
| H9Q12_RS10395 () | 2196591..2197247 | + | 657 | WP_037541928.1 | ATP-binding cassette domain-containing protein | - |
| H9Q12_RS10400 () | 2197680..2199071 | - | 1392 | WP_014614904.1 | L-cystine transporter | - |
| H9Q12_RS10405 () | 2199146..2200252 | - | 1107 | WP_015728532.1 | glycine oxidase ThiO | - |
| H9Q12_RS10410 () | 2200526..2201125 | - | 600 | WP_014614902.1 | hypothetical protein | - |
| H9Q12_RS10415 () | 2201239..2201913 | - | 675 | WP_115807382.1 | hypothetical protein | - |
| H9Q12_RS10420 () | 2202109..2202531 | - | 423 | WP_014614900.1 | general stress protein | - |
| H9Q12_RS10425 () | 2202992..2203576 | + | 585 | WP_096533335.1 | xanthine phosphoribosyltransferase | - |
| H9Q12_RS10430 () | 2203573..2204841 | + | 1269 | WP_014614898.1 | purine permease | - |
| H9Q12_RS10435 () | 2204879..2206345 | + | 1467 | WP_110165414.1 | IMP dehydrogenase | - |
| H9Q12_RS10440 () | 2206368..2207909 | + | 1542 | WP_014614896.1 | glutamine-hydrolyzing GMP synthase | - |
| H9Q12_RS10445 () | 2208568..2208861 | + | 294 | WP_096533768.1 | hypothetical protein | - |
| H9Q12_RS10450 () | 2208858..2210195 | + | 1338 | WP_096533769.1 | hypothetical protein | VF |
| H9Q12_RS10455 () | 2211818..2212732 | - | 915 | WP_014614890.1 | TDT family transporter | - |
| H9Q12_RS10460 () | 2213153..2213983 | - | 831 | WP_014614889.1 | thermonuclease family protein | - |
| H9Q12_RS10465 () | 2214998..2216950 | + | 1953 | WP_063279061.1 | YSIRK-type signal peptide-containing protein | - |
| H9Q12_RS10470 () | 2217610..2219664 | + | 2055 | WP_143566154.1 | Lipase 2 | VF |
| H9Q12_RS10475 () | 2219908..2221293 | - | 1386 | WP_014614886.1 | APC family permease | - |
| H9Q12_RS10480 () | 2221299..2222021 | - | 723 | WP_014614885.1 | Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD | VF |
| H9Q12_RS10485 () | 2222380..2223102 | + | 723 | WP_014614884.1 | hypothetical protein | - |
| H9Q12_RS10490 () | 2223468..2224277 | + | 810 | WP_014614883.1 | histidine racemase CntK | - |
| H9Q12_RS10495 () | 2224287..2225105 | + | 819 | WP_037541900.1 | staphylopine biosynthesis enzyme CntL | - |
| H9Q12_RS10500 () | 2225108..2226403 | + | 1296 | WP_014614881.1 | staphylopine biosynthesis dehydrogenase | - |
| H9Q12_RS10505 () | 2226641..2228239 | + | 1599 | WP_037544074.1 | nickel ABC transporter substrate-binding protein | - |
| H9Q12_RS10510 () | 2228252..2229184 | + | 933 | WP_014614879.1 | ABC transporter permease | - |
| H9Q12_RS10515 () | 2229186..2230049 | + | 864 | WP_014614878.1 | ABC transporter permease subunit | - |
| H9Q12_RS10520 () | 2230049..2230867 | + | 819 | WP_014614877.1 | ABC transporter ATP-binding protein | - |
| H9Q12_RS10525 () | 2230861..2231601 | + | 741 | WP_014614876.1 | ABC transporter ATP-binding protein | - |
| H9Q12_RS10530 () | 2231613..2232803 | + | 1191 | WP_014614875.1 | MFS transporter | - |
| H9Q12_RS10535 () | 2233055..2233870 | - | 816 | WP_000164963.1 | AAA family ATPase | - |
| H9Q12_RS10540 () | 2233863..2235305 | - | 1443 | WP_000790705.1 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| H9Q12_RS10545 () | 2235277..2235870 | - | 594 | WP_000690628.1 | Tn3 family transposase TnBth3 | Transposase |
| H9Q12_RS10550 () | 2236134..2236514 | - | 381 | WP_001284656.1 | penicillinase repressor BlaI | - |
| H9Q12_RS10555 () | 2236504..2238261 | - | 1758 | WP_001096374.1 | beta-lactam sensor/signal transducer BlaR1 | - |
| H9Q12_RS10560 () | 2238368..2239213 | + | 846 | WP_000733283.1 | Beta-lactamase | ARG |
| H9Q12_RS10565 () | 2239980..2241266 | + | 1287 | WP_014613984.1 | group II intron reverse transcriptase/maturase | - |
| H9Q12_RS10570 () | 2241418..2241846 | - | 429 | WP_014614873.1 | antibiotic biosynthesis monooxygenase | - |
| H9Q12_RS10575 () | 2242090..2243262 | - | 1173 | WP_187470741.1 | MFS transporter | - |
| H9Q12_RS10580 () | 2243455..2244204 | - | 750 | WP_014614871.1 | sulfite exporter TauE/SafE family protein | - |
| H9Q12_RS10585 () | 2244204..2244464 | - | 261 | WP_014614870.1 | persulfide-sensing transcriptional repressor CstR | - |
| H9Q12_RS10590 () | 2244604..2245680 | + | 1077 | WP_014614869.1 | DsrE/DsrF/DrsH-like family protein | - |
| H9Q12_RS10595 () | 2245699..2247048 | + | 1350 | WP_014614868.1 | persulfide dioxygenase-sulfurtransferase CstB | - |
| H9Q12_RS10600 () | 2247180..2247740 | + | 561 | WP_014614867.1 | hypothetical protein | - |
| H9Q12_RS10605 () | 2247866..2248621 | - | 756 | WP_014614866.1 | MurR/RpiR family transcriptional regulator | - |
| H9Q12_RS10610 () | 2248890..2250476 | + | 1587 | WP_041613302.1 | alpha-glucoside-specific PTS transporter subunit IIBC | - |
| H9Q12_RS10615 () | 2250477..2251802 | + | 1326 | WP_187470742.1 | 6-phospho-alpha-glucosidase | - |
| H9Q12_RS10620 () | 2251893..2252753 | - | 861 | WP_014614863.1 | oxidoreductase | - |
| H9Q12_RS10625 () | 2253005..2253817 | + | 813 | WP_014614862.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| H9Q12_RS10630 () | 2253814..2254674 | + | 861 | WP_187470743.1 | pantoate--beta-alanine ligase | - |
| H9Q12_RS10635 () | 2254671..2255054 | + | 384 | WP_014614860.1 | aspartate 1-decarboxylase | - |
| H9Q12_RS10640 () | 2255378..2255614 | + | 237 | WP_001159903.1 | hypothetical protein | - |
| H9Q12_RS10645 () | 2255621..2257573 | + | 1953 | WP_000163792.1 | hypothetical protein | - |
| H9Q12_RS10650 () | 2257645..2258142 | - | 498 | WP_000868795.1 | Dihydrofolate reductase | ARG |
| H9Q12_RS10655 () | 2258457..2259161 | - | 705 | WP_099997331.1 | hypothetical protein | VF |
| H9Q12_RS10660 () | 2259355..2260854 | - | 1500 | WP_037544060.1 | Staphylocoagulase | VF |
| H9Q12_RS10665 () | 2261422..2261721 | - | 300 | Protein_2081 | NAD(P)-dependent oxidoreductase | - |
| H9Q12_RS10670 () | 2261849..2264473 | + | 2625 | WP_110165513.1 | pyruvate, phosphate dikinase | - |
| H9Q12_RS10675 () | 2264475..2265290 | + | 816 | WP_015728561.1 | kinase/pyrophosphorylase | - |
| H9Q12_RS10680 () | 2265556..2266195 | + | 640 | Protein_2084 | NAD(P)H-dependent oxidoreductase | - |
| H9Q12_RS10685 () | 2266312..2266872 | - | 561 | WP_096536602.1 | K(+)-transporting ATPase subunit C | - |
| H9Q12_RS10690 () | 2266883..2268907 | - | 2025 | WP_096536600.1 | potassium-transporting ATPase subunit KdpB | - |
| H9Q12_RS10695 () | 2268923..2270599 | - | 1677 | WP_015728565.1 | potassium-transporting ATPase subunit A | - |
| H9Q12_RS10700 () | 2270625..2270705 | - | 81 | WP_064485063.1 | K(+)-transporting ATPase subunit F | - |
| H9Q12_RS10705 () | 2270872..2273496 | + | 2625 | WP_096538150.1 | sensor histidine kinase KdpD | - |
| H9Q12_RS10710 () | 2273510..2274199 | + | 690 | WP_100002652.1 | Transcriptional regulatory protein KdpE | VF |
| H9Q12_RS10715 () | 2274392..2274580 | - | 189 | WP_014614849.1 | hypothetical protein | - |
| H9Q12_RS10720 () | 2274764..2276092 | + | 1329 | WP_187470744.1 | sodium-dependent transporter | - |
| H9Q12_RS10725 () | 2276242..2277567 | - | 1326 | WP_187470745.1 | carboxylesterase family protein | - |
| H9Q12_RS10730 () | 2277850..2278755 | + | 906 | WP_014614845.1 | cysteine synthase family protein | - |
| H9Q12_RS10735 () | 2278748..2279890 | + | 1143 | WP_014614844.1 | bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase | - |
| H9Q12_RS10740 () | 2280486..2280692 | + | 207 | WP_014614842.1 | hypothetical protein | - |
| H9Q12_RS10745 () | 2281030..2282037 | + | 1008 | WP_096536594.1 | LysM peptidoglycan-binding domain-containing protein | - |
| H9Q12_RS10750 () | 2282274..2282954 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| H9Q12_RS10755 () | 2283110..2283394 | + | 285 | WP_002326770.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| H9Q12_RS10760 () | 2283497..2283739 | + | 243 | Protein_2100 | AAA family ATPase | - |
| H9Q12_RS10765 () | 2283815..2284495 | + | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| H9Q12_RS10770 () | 2284569..2284763 | + | 195 | WP_071623318.1 | single-stranded DNA-binding protein | - |
| H9Q12_RS10775 () | 2284866..2285735 | + | 870 | WP_000228166.1 | nucleotidyltransferase domain-containing protein | - |
| H9Q12_RS10780 () | 2285716..2286450 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| H9Q12_RS10785 () | 2286483..2287391 | + | 909 | WP_001255866.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| H9Q12_RS10790 () | 2287388..2287930 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| H9Q12_RS10795 () | 2288023..2288817 | + | 795 | WP_001096887.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| H9Q12_RS10800 () | 2289093..2289665 | + | 573 | WP_187470746.1 | HTH domain-containing protein | - |
| H9Q12_RS10805 () | 2289963..2290859 | + | 897 | WP_002334978.1 | ParA family protein | - |
| H9Q12_RS10810 () | 2290958..2291167 | + | 210 | WP_000527318.1 | peptide-binding protein | - |
| H9Q12_RS10815 () | 2291184..2291456 | + | 273 | WP_002331065.1 | antitoxin | Antitoxin Detail |
| H9Q12_RS10820 () | 2291458..2291880 | + | 423 | WP_002334977.1 | zeta toxin family protein | Toxin Detail |
| H9Q12_RS10825 () | 2291934..2292614 | + | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| H9Q12_RS10830 () | 2292644..2292796 | - | 153 | WP_029682262.1 | hypothetical protein | - |
| H9Q12_RS10835 () | 2292741..2293478 | - | 738 | WP_002292226.1 | rRNA adenine N-6-methyltransferase | ARG |
| H9Q12_RS10840 () | 2293603..2293686 | - | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| H9Q12_RS10845 () | 2293735..2293976 | - | 242 | Protein_2117 | peptide-binding protein | - |
| H9Q12_RS10850 () | 2294110..2295327 | - | 1218 | Protein_2118 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| H9Q12_RS10855 () | 2295843..2296754 | + | 912 | Protein_2119 | replication initiation factor domain-containing protein | - |
| H9Q12_RS10860 () | 2296884..2297531 | + | 648 | WP_002331392.1 | Chloramphenicol acetyltransferase | ARG |
| H9Q12_RS10865 () | 2297836..2299098 | + | 1263 | WP_000119405.1 | plasmid recombination protein | - |
| H9Q12_RS10870 () | 2299343..2299999 | + | 657 | WP_096533712.1 | protein rep | - |
| H9Q12_RS10875 () | 2300037..2300717 | + | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| H9Q12_RS10880 () | 2300845..2301804 | + | 960 | WP_000222577.1 | IS30 family transposase IS1252 | Transposase |
| H9Q12_RS10885 () | 2302237..2302809 | - | 573 | WP_000170424.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| H9Q12_RS10890 () | 2302825..2303430 | - | 606 | WP_000599739.1 | cell filamentation protein | - |
| H9Q12_RS10895 () | 2303771..2304046 | - | 276 | WP_015728571.1 | hypothetical protein | - |
| H9Q12_RS10900 () | 2304351..2304866 | + | 516 | WP_096536641.1 | hypothetical protein | - |
| H9Q12_RS10905 () | 2305328..2305936 | - | 609 | WP_037544039.1 | hypothetical protein | - |
| H9Q12_RS10910 () | 2305933..2306889 | - | 957 | WP_015728573.1 | insulinase family protein | - |
| H9Q12_RS10915 () | 2306892..2307989 | - | 1098 | WP_037544036.1 | insulinase family protein | - |
| H9Q12_RS10920 () | 2307976..2308767 | - | 792 | WP_129821147.1 | hypothetical protein | - |
| H9Q12_RS10925 () | 2309237..2309935 | - | 699 | WP_015728576.1 | ABC transporter ATP-binding protein | - |
| H9Q12_RS10930 () | 2309913..2310086 | - | 174 | WP_075773653.1 | DUF308 domain-containing protein | - |
| H9Q12_RS10935 () | 2310100..2311434 | - | 1335 | WP_063284953.1 | radical SAM protein | - |
| H9Q12_RS10940 () | 2311512..2311643 | - | 132 | WP_037544023.1 | subtilosin A family bacteriocin | - |
| H9Q12_RS10945 () | 2311769..2312407 | + | 639 | WP_015728579.1 | Crp/Fnr family transcriptional regulator | - |
| H9Q12_RS10950 () | 2312865..2313464 | + | 600 | WP_037544021.1 | IS1182 family transposase ISSep1 | Transposase |
| H9Q12_RS10955 () | 2313468..2313788 | + | 321 | WP_037544019.1 | transposase | - |
| H9Q12_RS10960 () | 2313855..2316116 | - | 2262 | WP_037544007.1 | UvrABC system protein A | VF |
| H9Q12_RS10965 () | 2316165..2316938 | - | 774 | WP_037544005.1 | YibE/F family protein | - |
| H9Q12_RS10970 () | 2316935..2318044 | - | 1110 | WP_037544001.1 | YibE/F family protein | - |
| H9Q12_RS10975 () | 2318057..2318935 | - | 879 | WP_037543997.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|