MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110273 bp
Accession: NZ_CP060667 Location: 1..110273 Organism: Salmonella enterica strain 190821_1 Replicon: plasmid unnamed
Accession: NZ_CP060667 Location: 1..110273 Organism: Salmonella enterica strain 190821_1 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q88_RS22755 (H9Q88_22630) | 173..250 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| H9Q88_RS22760 (H9Q88_22635) | 231..1112 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| H9Q88_RS22765 (H9Q88_22640) | 1995..2189 | + | 195 | Protein_2 | SdiA-regulated domain-containing protein | - |
| H9Q88_RS22770 (H9Q88_22645) | 2286..3032 | - | 747 | WP_263923268.1 | AraC family transcriptional regulator | - |
| H9Q88_RS22775 (H9Q88_22650) | 3298..3855 | - | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| H9Q88_RS22780 (H9Q88_22655) | 3945..4790 | - | 846 | WP_001701740.1 | YjiK family protein | - |
| H9Q88_RS22785 (H9Q88_22660) | 4841..4987 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| H9Q88_RS22790 (H9Q88_22665) | 4977..5633 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| H9Q88_RS22795 (H9Q88_22670) | 5877..6227 | - | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| H9Q88_RS22800 (H9Q88_22675) | 6212..6424 | - | 213 | WP_000004289.1 | hypothetical protein | VF |
| H9Q88_RS22805 (H9Q88_22680) | 6684..7625 | - | 942 | WP_223156944.1 | hypothetical protein | - |
| H9Q88_RS22810 (H9Q88_22685) | 7721..8299 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| H9Q88_RS22815 (H9Q88_22690) | 8296..8988 | - | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| H9Q88_RS22820 (H9Q88_22695) | 8981..11389 | - | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| H9Q88_RS22825 (H9Q88_22700) | 11616..12140 | - | 525 | WP_000748204.1 | hypothetical protein | VF |
| H9Q88_RS22830 (H9Q88_22705) | 12415..12717 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H9Q88_RS22835 (H9Q88_22710) | 12746..13057 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| H9Q88_RS22840 (H9Q88_22715) | 13424..13810 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| H9Q88_RS22845 (H9Q88_22720) | 13863..13982 | + | 120 | Protein_18 | recombinase | - |
| H9Q88_RS22850 (H9Q88_22725) | 14351..15340 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| H9Q88_RS22855 (H9Q88_22730) | 15834..16129 | - | 296 | Protein_20 | cytoplasmic protein | - |
| H9Q88_RS22860 (H9Q88_22735) | 16141..16569 | + | 429 | Protein_21 | hypothetical protein | - |
| H9Q88_RS22865 (H9Q88_22740) | 16613..17134 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| H9Q88_RS22870 (H9Q88_22745) | 17810..18028 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H9Q88_RS22875 (H9Q88_22750) | 18030..18335 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9Q88_RS22880 (H9Q88_22755) | 18337..18627 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| H9Q88_RS22885 (H9Q88_22760) | 18624..19145 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| H9Q88_RS22890 (H9Q88_22765) | 19180..19962 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| H9Q88_RS22895 (H9Q88_22770) | 19971..20684 | + | 714 | WP_000545756.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| H9Q88_RS22900 (H9Q88_22775) | 20709..21197 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q88_RS22905 (H9Q88_22780) | 21191..21676 | + | 486 | WP_000905606.1 | membrane protein | - |
| H9Q88_RS22910 (H9Q88_22785) | 21953..22240 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| H9Q88_RS22915 (H9Q88_22790) | 22396..22956 | + | 561 | WP_000900095.1 | Invasin | VF |
| H9Q88_RS22920 (H9Q88_22795) | 23023..23373 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| H9Q88_RS22925 (H9Q88_22800) | 23430..23855 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| H9Q88_RS22930 (H9Q88_22805) | 23982..24632 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| H9Q88_RS22935 (H9Q88_22810) | 24894..25619 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| H9Q88_RS22940 (H9Q88_22815) | 25900..27675 | - | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| H9Q88_RS22945 (H9Q88_22820) | 27727..27894 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| H9Q88_RS22950 (H9Q88_22825) | 27857..28624 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| H9Q88_RS22955 (H9Q88_22830) | 28798..28962 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| H9Q88_RS22960 (H9Q88_22835) | 29136..30029 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| H9Q88_RS22965 (H9Q88_22840) | 30637..31674 | + | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| H9Q88_RS22970 (H9Q88_22845) | 31863..32888 | - | 1026 | WP_077907510.1 | ExeA family protein | - |
| H9Q88_RS22975 (H9Q88_22850) | 32821..34485 | - | 1665 | WP_000098781.1 | IS481 family transposase ISAzs36 | Transposase |
| H9Q88_RS22980 (H9Q88_22855) | 34469..34735 | - | 267 | Protein_45 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H9Q88_RS22985 (H9Q88_22860) | 34788..35492 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9Q88_RS22990 (H9Q88_22865) | 36155..36895 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| H9Q88_RS22995 (H9Q88_22870) | 37102..37407 | + | 306 | Protein_48 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| H9Q88_RS23000 (H9Q88_22875) | 37467..38171 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9Q88_RS23005 (H9Q88_22880) | 38224..38895 | - | 672 | Protein_50 | hypothetical protein | - |
| H9Q88_RS23010 (H9Q88_22885) | 38946..39173 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| H9Q88_RS23015 (H9Q88_22890) | 39197..39388 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| H9Q88_RS23020 (H9Q88_22895) | 39870..40412 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| H9Q88_RS23025 (H9Q88_22900) | 40425..41285 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| H9Q88_RS23030 (H9Q88_22905) | 41428..41655 | + | 228 | Protein_55 | IS4 family transposase | - |
| H9Q88_RS23035 (H9Q88_22910) | 41709..42413 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| H9Q88_RS23040 (H9Q88_22915) | 42568..42849 | - | 282 | WP_000077926.1 | hypothetical protein | - |
| H9Q88_RS23045 (H9Q88_22920) | 42899..43090 | - | 192 | WP_000398480.1 | hypothetical protein | - |
| H9Q88_RS23050 (H9Q88_22925) | 43182..43523 | - | 342 | WP_001151575.1 | hypothetical protein | - |
| H9Q88_RS23055 (H9Q88_22930) | 43896..44288 | + | 393 | WP_000341066.1 | hypothetical protein | - |
| H9Q88_RS23060 (H9Q88_22935) | 44920..45213 | + | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| H9Q88_RS23065 (H9Q88_22940) | 45218..46543 | + | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| H9Q88_RS23070 (H9Q88_22945) | 46604..46810 | + | 207 | WP_000134171.1 | hypothetical protein | - |
| H9Q88_RS23075 (H9Q88_22950) | 46912..47322 | + | 411 | WP_000985911.1 | hypothetical protein | - |
| H9Q88_RS23080 (H9Q88_22955) | 47335..48150 | + | 816 | WP_001572439.1 | HNH endonuclease signature motif containing protein | - |
| H9Q88_RS23085 (H9Q88_22960) | 48404..48829 | + | 426 | WP_001043843.1 | hypothetical protein | - |
| H9Q88_RS23090 (H9Q88_22965) | 49283..49519 | + | 237 | Protein_67 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| H9Q88_RS23095 (H9Q88_22970) | 49574..49873 | + | 300 | WP_001572440.1 | hypothetical protein | - |
| H9Q88_RS23100 (H9Q88_22975) | 50186..52225 | - | 2040 | WP_032192809.1 | ATP-dependent helicase | - |
| H9Q88_RS23105 (H9Q88_22980) | 52222..53076 | - | 855 | WP_074149649.1 | hypothetical protein | - |
| H9Q88_RS23110 (H9Q88_22985) | 53839..54177 | + | 339 | WP_223231361.1 | HNH endonuclease signature motif containing protein | - |
| H9Q88_RS23115 (H9Q88_22990) | 54239..54442 | + | 204 | WP_001194555.1 | hypothetical protein | - |
| H9Q88_RS23120 (H9Q88_22995) | 54784..55188 | - | 405 | WP_001287392.1 | H-NS family nucleoid-associated regulatory protein | - |
| H9Q88_RS23125 (H9Q88_23000) | 55686..55922 | - | 237 | WP_000175476.1 | hypothetical protein | - |
| H9Q88_RS23130 (H9Q88_23005) | 55964..56419 | - | 456 | WP_001572344.1 | hypothetical protein | - |
| H9Q88_RS23135 (H9Q88_23010) | 56479..57144 | - | 666 | WP_000490638.1 | hypothetical protein | - |
| H9Q88_RS23140 (H9Q88_23015) | 57202..57582 | - | 381 | WP_001426317.1 | hypothetical protein | - |
| H9Q88_RS23145 (H9Q88_23020) | 58225..59043 | + | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
| H9Q88_RS23150 (H9Q88_23025) | 59040..60245 | + | 1206 | WP_001572381.1 | hypothetical protein | - |
| H9Q88_RS23155 (H9Q88_23030) | 60525..61040 | - | 516 | WP_232456356.1 | DUF1173 family protein | - |
| H9Q88_RS23160 (H9Q88_23040) | 61447..61794 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| H9Q88_RS23165 (H9Q88_23045) | 61844..63379 | + | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| H9Q88_RS23170 (H9Q88_23050) | 63417..64289 | - | 873 | WP_152933450.1 | DUF1173 family protein | - |
| H9Q88_RS23175 (H9Q88_23055) | 64312..64479 | - | 168 | WP_000220758.1 | hypothetical protein | - |
| H9Q88_RS23180 (H9Q88_23060) | 64540..65967 | - | 1428 | WP_000833382.1 | DNA cytosine methyltransferase | - |
| H9Q88_RS23185 (H9Q88_23065) | 66182..66697 | + | 516 | WP_001572389.1 | thermonuclease family protein | - |
| H9Q88_RS23190 (H9Q88_23070) | 66700..67596 | + | 897 | WP_000975182.1 | hypothetical protein | - |
| H9Q88_RS23195 | 67644..68051 | + | 408 | WP_001572392.1 | hypothetical protein | - |
| H9Q88_RS23200 (H9Q88_23080) | 68746..68943 | + | 198 | WP_000710701.1 | hypothetical protein | - |
| H9Q88_RS23205 (H9Q88_23085) | 69280..69741 | + | 462 | WP_000185304.1 | hypothetical protein | - |
| H9Q88_RS23210 (H9Q88_23090) | 69771..70178 | + | 408 | WP_000074418.1 | hypothetical protein | - |
| H9Q88_RS23215 (H9Q88_23095) | 70229..70522 | - | 294 | WP_062873134.1 | hypothetical protein | - |
| H9Q88_RS23220 (H9Q88_23100) | 70515..70757 | - | 243 | WP_066038544.1 | hypothetical protein | - |
| H9Q88_RS23225 (H9Q88_23105) | 70981..72243 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H9Q88_RS23230 (H9Q88_23110) | 72499..73374 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| H9Q88_RS23235 (H9Q88_23115) | 73421..73714 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| H9Q88_RS23240 (H9Q88_23120) | 73979..74365 | - | 387 | WP_181728339.1 | hypothetical protein | - |
| H9Q88_RS23245 (H9Q88_23125) | 74439..76190 | - | 1752 | Protein_98 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9Q88_RS23250 (H9Q88_23130) | 76194..76586 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| H9Q88_RS23255 (H9Q88_23135) | 76724..77608 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| H9Q88_RS23260 (H9Q88_23140) | 77640..78839 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| H9Q88_RS23265 (H9Q88_23145) | 78945..79595 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9Q88_RS23270 (H9Q88_23150) | 79627..79869 | - | 243 | WP_000844627.1 | transposase | - |
| H9Q88_RS23275 (H9Q88_23155) | 80656..81090 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| H9Q88_RS23280 (H9Q88_23160) | 81162..81512 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| H9Q88_RS23285 (H9Q88_23165) | 81526..81801 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| H9Q88_RS23290 (H9Q88_23170) | 81837..82259 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| H9Q88_RS23295 (H9Q88_23175) | 82311..84005 | + | 1695 | WP_032193845.1 | mercury(II) reductase | - |
| H9Q88_RS23300 (H9Q88_23180) | 84023..84385 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| H9Q88_RS23305 (H9Q88_23185) | 84382..84618 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| H9Q88_RS23310 (H9Q88_23190) | 84654..85322 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| H9Q88_RS23315 (H9Q88_23195) | 85397..86647 | + | 1251 | Protein_112 | transposase | - |
| H9Q88_RS23320 (H9Q88_23200) | 86712..87416 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9Q88_RS23325 (H9Q88_23205) | 87532..88020 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| H9Q88_RS23330 (H9Q88_23210) | 88278..89393 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| H9Q88_RS23335 (H9Q88_23215) | 89479..89895 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| H9Q88_RS23340 (H9Q88_23220) | 89998..90414 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| H9Q88_RS23345 (H9Q88_23225) | 90471..91076 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| H9Q88_RS23350 (H9Q88_23230) | 91073..92014 | - | 942 | WP_000728919.1 | Recombination-promoting nuclease RpnA | VF |
| H9Q88_RS23355 (H9Q88_23235) | 92429..93634 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| H9Q88_RS23360 (H9Q88_23240) | 93634..94608 | + | 975 | WP_000064277.1 | ParB family protein | - |
| H9Q88_RS23365 (H9Q88_23245) | 94690..95964 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| H9Q88_RS23370 (H9Q88_23250) | 95964..96386 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9Q88_RS23375 (H9Q88_23255) | 96687..98408 | + | 1722 | Protein_124 | ParB/RepB/Spo0J family partition protein | - |
| H9Q88_RS23380 | 98448..98549 | + | 102 | Protein_125 | conjugation system SOS inhibitor PsiB | - |
| H9Q88_RS23385 (H9Q88_23265) | 98552..99208 | + | 657 | Protein_126 | plasmid SOS inhibition protein A | - |
| H9Q88_RS23390 | 99243..99371 | + | 129 | WP_000372430.1 | hypothetical protein | - |
| H9Q88_RS23395 (H9Q88_23270) | 99457..99615 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| H9Q88_RS23400 (H9Q88_23275) | 99718..100536 | + | 819 | Protein_129 | DUF945 domain-containing protein | - |
| H9Q88_RS23405 (H9Q88_23280) | 100847..101317 | - | 471 | WP_015056628.1 | hypothetical protein | VF |
| H9Q88_RS23410 (H9Q88_23285) | 101733..102113 | + | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H9Q88_RS23415 (H9Q88_23290) | 102307..102992 | + | 686 | Protein_132 | PAS domain-containing protein | - |
| H9Q88_RS23420 (H9Q88_23295) | 103086..103313 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| H9Q88_RS23425 (H9Q88_23300) | 103355..103717 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| H9Q88_RS23430 (H9Q88_23305) | 103732..104043 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| H9Q88_RS23435 (H9Q88_23310) | 104065..104631 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| H9Q88_RS23440 (H9Q88_23315) | 104618..105358 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| H9Q88_RS23445 (H9Q88_23320) | 105358..106779 | + | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H9Q88_RS23450 (H9Q88_23325) | 106769..107365 | + | 597 | WP_000527901.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| H9Q88_RS23455 (H9Q88_23330) | 107343..107567 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| H9Q88_RS23460 (H9Q88_23335) | 107564..108078 | + | 515 | Protein_141 | type IV conjugative transfer system lipoprotein TraV | - |
| H9Q88_RS23465 (H9Q88_23340) | 108158..108580 | + | 423 | Protein_142 | fertility inhibition protein FinO | - |
| H9Q88_RS23470 | 108697..108978 | + | 282 | Protein_143 | disulfide bond formation protein DsbA | - |
| H9Q88_RS23475 | 109259..109819 | + | 561 | Protein_144 | phospholipase D family protein | - |
| H9Q88_RS23480 (H9Q88_23360) | 109930..110196 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|