MGE detailed information
MGE type: Prophage MGE length: 75915 bp
Accession: NZ_CP060666 Location: 2280689..2356603 Organism: Salmonella enterica strain 190821_1 Replicon: chromosome
Accession: NZ_CP060666 Location: 2280689..2356603 Organism: Salmonella enterica strain 190821_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q88_RS11270 () | 2276418..2276876 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| H9Q88_RS11275 () | 2277286..2277852 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| H9Q88_RS11280 () | 2277849..2278658 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| H9Q88_RS11285 () | 2278724..2280469 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| H9Q88_RS11290 () | 2280689..2280898 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| H9Q88_RS11295 () | 2280911..2281054 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| H9Q88_RS11300 () | 2281703..2281990 | - | 288 | WP_001000660.1 | YebO family protein | - |
| H9Q88_RS11305 () | 2282061..2282204 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| H9Q88_RS11310 () | 2282362..2282601 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| H9Q88_RS11315 () | 2282813..2283604 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| H9Q88_RS11320 () | 2283780..2285153 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| H9Q88_RS11325 () | 2285201..2286082 | - | 882 | WP_000984498.1 | protease HtpX | - |
| H9Q88_RS11330 () | 2286276..2288324 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| H9Q88_RS11335 () | 2288344..2289030 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| H9Q88_RS11340 () | 2289128..2289625 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| H9Q88_RS11345 () | 2289754..2291037 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| H9Q88_RS11350 () | 2291006..2293639 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| H9Q88_RS11355 () | 2293717..2295156 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| H9Q88_RS11360 () | 2295274..2295510 | + | 237 | WP_024131108.1 | YebV family protein | - |
| H9Q88_RS11365 () | 2295621..2295812 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| H9Q88_RS11370 () | 2295831..2296481 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| H9Q88_RS11375 () | 2296705..2296869 | - | 165 | WP_001134856.1 | membrane protein | - |
| H9Q88_RS11380 () | 2297154..2297876 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| H9Q88_RS11385 () | 2298560..2298955 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| H9Q88_RS11390 () | 2299285..2299761 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| H9Q88_RS11395 () | 2300134..2300553 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| H9Q88_RS11400 () | 2300926..2301195 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| H9Q88_RS11405 () | 2301361..2301501 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| H9Q88_RS11410 () | 2301647..2302854 | - | 1208 | Protein_2229 | IS256 family transposase ISEc39 | Transposase |
| H9Q88_RS11415 () | 2302924..2303390 | + | 467 | Protein_2230 | tyrosine-type recombinase/integrase | - |
| H9Q88_RS11420 () | 2304640..2305554 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| H9Q88_RS11425 () | 2305687..2305845 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| H9Q88_RS11430 () | 2305855..2306469 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| H9Q88_RS11435 () | 2306796..2307028 | - | 233 | Protein_2234 | helix-turn-helix domain-containing protein | - |
| H9Q88_RS11440 () | 2307637..2307738 | - | 102 | Protein_2235 | arsenic transporter | - |
| H9Q88_RS11445 () | 2307729..2307909 | + | 181 | Protein_2236 | IS3 family transposase | - |
| H9Q88_RS11450 () | 2308299..2308499 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| H9Q88_RS11455 () | 2308596..2309107 | - | 512 | Protein_2238 | tail fiber assembly protein | - |
| H9Q88_RS11460 () | 2309120..2309407 | - | 288 | Protein_2239 | macro domain-containing protein | - |
| H9Q88_RS11465 () | 2309417..2310648 | - | 1232 | Protein_2240 | tail fiber protein | - |
| H9Q88_RS11470 () | 2310647..2311214 | - | 568 | Protein_2241 | phage terminase large subunit family protein | - |
| H9Q88_RS11475 () | 2311201..2311692 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| H9Q88_RS11480 () | 2311747..2311935 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| H9Q88_RS11485 () | 2312000..2312167 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| H9Q88_RS11490 () | 2312424..2312957 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| H9Q88_RS11495 () | 2313011..2313202 | - | 192 | Protein_2246 | glycoside hydrolase family 19 protein | - |
| H9Q88_RS11500 () | 2313191..2313652 | + | 462 | Protein_2247 | DNA breaking-rejoining protein | - |
| H9Q88_RS11505 () | 2313916..2314838 | + | 923 | Protein_2248 | hypothetical protein ; Integrase | Integrase |
| H9Q88_RS11510 () | 2315783..2316583 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| H9Q88_RS11515 () | 2316612..2316853 | - | 242 | Protein_2250 | recombinase family protein | - |
| H9Q88_RS11520 () | 2317063..2317785 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| H9Q88_RS11525 () | 2317987..2318331 | - | 345 | Protein_2252 | tail fiber assembly protein | - |
| H9Q88_RS11530 () | 2318336..2319199 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| H9Q88_RS11535 () | 2319239..2321570 | - | 2332 | Protein_2254 | host specificity protein J | - |
| H9Q88_RS11540 () | 2321570..2321830 | - | 261 | Protein_2255 | C40 family peptidase | - |
| H9Q88_RS11545 () | 2321840..2322535 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| H9Q88_RS11550 () | 2322625..2323158 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| H9Q88_RS11555 () | 2323275..2323454 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9Q88_RS11560 () | 2323534..2323845 | - | 312 | Protein_2259 | DUF1441 family protein | - |
| H9Q88_RS11565 () | 2324053..2324532 | - | 480 | WP_001541990.1 | lysis protein | - |
| H9Q88_RS11570 () | 2324550..2325002 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| H9Q88_RS11575 () | 2324986..2325315 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| H9Q88_RS11580 () | 2325591..2326277 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| H9Q88_RS11585 () | 2326638..2327087 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| H9Q88_RS11590 () | 2327461..2327988 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| H9Q88_RS11595 () | 2328082..2328771 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| H9Q88_RS11600 () | 2328768..2328904 | - | 137 | Protein_2267 | YlcG family protein | - |
| H9Q88_RS11605 () | 2328901..2329041 | - | 141 | Protein_2268 | recombination protein NinG | - |
| H9Q88_RS11610 () | 2329125..2329724 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| H9Q88_RS11615 () | 2329788..2330006 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| H9Q88_RS11620 () | 2330308..2330406 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| H9Q88_RS11625 () | 2330725..2332704 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| H9Q88_RS11630 () | 2333118..2333396 | + | 279 | WP_001575998.1 | excisionase | - |
| H9Q88_RS11635 () | 2333371..2334450 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2334588..2334733 | + | 146 | - | - | Antitoxin Detail |
| - | 2334590..2334693 | - | 104 | - | - | Toxin Detail |
| H9Q88_RS11640 () | 2334833..2335186 | - | 354 | WP_000722370.1 | YebY family protein | - |
| H9Q88_RS11645 () | 2335203..2336078 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| H9Q88_RS11650 () | 2336079..2336453 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| H9Q88_RS11655 () | 2336591..2336821 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| H9Q88_RS11660 () | 2336929..2337585 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| H9Q88_RS11665 () | 2337609..2338307 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| H9Q88_RS11670 () | 2338344..2340395 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| H9Q88_RS11675 () | 2340608..2341267 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| H9Q88_RS11680 () | 2341361..2341714 | - | 354 | WP_001042123.1 | protein YebF | - |
| H9Q88_RS11685 () | 2341782..2342072 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| H9Q88_RS11690 () | 2342203..2343381 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| H9Q88_RS11695 () | 2343481..2344122 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| H9Q88_RS11700 () | 2344160..2345971 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| H9Q88_RS11705 () | 2346206..2347681 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| H9Q88_RS11710 () | 2348023..2348892 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| H9Q88_RS11715 () | 2349016..2350458 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| H9Q88_RS11720 () | 2350531..2351502 | - | 972 | WP_000448401.1 | hypothetical protein | VF |
| H9Q88_RS11725 () | 2351619..2352938 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| H9Q88_RS11730 () | 2352954..2353898 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| H9Q88_RS11735 () | 2353977..2354732 | + | 756 | WP_000203023.1 | hypothetical protein | VF |
| H9Q88_RS11740 () | 2354729..2355514 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| H9Q88_RS11745 () | 2355593..2356603 | - | 1011 | WP_000568508.1 | hypothetical protein | VF |
| H9Q88_RS11750 () | 2356612..2357223 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| H9Q88_RS11755 () | 2357583..2358275 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| H9Q88_RS11760 () | 2358484..2359083 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| H9Q88_RS11765 () | 2359085..2359606 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| H9Q88_RS11770 () | 2359643..2360383 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| H9Q88_RS11775 () | 2360413..2360865 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|