MGE detailed information
MGE type: Prophage MGE length: 45744 bp
Accession: NZ_CP060528 Location: 1842002..1887745 Organism: Staphylococcus epidermidis strain LM087 Replicon: chromosome
Accession: NZ_CP060528 Location: 1842002..1887745 Organism: Staphylococcus epidermidis strain LM087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATM22_RS08665 () | 1837690..1838628 | + | 939 | WP_002474052.1 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | - |
| ATM22_RS08670 () | 1838980..1839537 | - | 558 | WP_001831688.1 | GNAT family N-acetyltransferase | - |
| ATM22_RS08675 () | 1839767..1839982 | + | 216 | WP_001831694.1 | NINE protein | - |
| ATM22_RS08680 () | 1840458..1841192 | + | 735 | WP_002493350.1 | hypothetical protein | - |
| ATM22_RS08685 () | 1842002..1842439 | - | 438 | WP_002493351.1 | hypothetical protein | - |
| ATM22_RS08690 () | 1842919..1844127 | - | 1209 | WP_002493352.1 | Fic family protein | - |
| ATM22_RS08695 () | 1844539..1845942 | - | 1404 | WP_002493353.1 | N-acetylmuramoyl-L-alanine amidase | - |
| ATM22_RS08700 () | 1845942..1846211 | - | 270 | WP_002493354.1 | phage holin | - |
| ATM22_RS08705 () | 1846267..1846797 | - | 531 | WP_002493355.1 | hypothetical protein | - |
| ATM22_RS08710 () | 1846797..1847306 | - | 510 | WP_002493356.1 | hypothetical protein | - |
| ATM22_RS08715 () | 1847359..1847577 | - | 219 | Protein_1683 | CHAP domain-containing protein | - |
| ATM22_RS08720 () | 1847572..1847820 | - | 249 | Protein_1684 | phage holin | - |
| ATM22_RS08725 () | 1847884..1848282 | - | 399 | WP_002493358.1 | YxeA family protein | - |
| ATM22_RS08730 () | 1848410..1848556 | - | 147 | WP_002493359.1 | XkdX family protein | - |
| ATM22_RS08735 () | 1848549..1848884 | - | 336 | WP_002493360.1 | hypothetical protein | - |
| ATM22_RS08740 () | 1848896..1850554 | - | 1659 | WP_002493361.1 | BppU family phage baseplate upper protein | - |
| ATM22_RS08745 () | 1850607..1852484 | - | 1878 | WP_002493362.1 | Bifunctional autolysin | VF |
| ATM22_RS08750 () | 1852539..1852937 | - | 399 | WP_002493363.1 | hypothetical protein | - |
| ATM22_RS08755 () | 1852918..1853340 | - | 423 | WP_002493364.1 | hypothetical protein | - |
| ATM22_RS08760 () | 1853354..1854541 | - | 1188 | WP_002493365.1 | BppU family phage baseplate upper protein | - |
| ATM22_RS08765 () | 1854557..1856440 | - | 1884 | WP_002493366.1 | DUF2817 domain-containing protein | - |
| ATM22_RS08770 () | 1856443..1857903 | - | 1461 | WP_002493367.1 | hypothetical protein | - |
| ATM22_RS08775 () | 1857915..1858871 | - | 957 | WP_002493368.1 | phage tail family protein | - |
| ATM22_RS08780 () | 1858883..1862602 | - | 3720 | WP_002493369.1 | hypothetical protein | - |
| ATM22_RS08785 () | 1862617..1862961 | - | 345 | WP_033862682.1 | hypothetical protein | - |
| ATM22_RS08790 () | 1863003..1863362 | - | 360 | WP_002493371.1 | hypothetical protein | - |
| ATM22_RS08795 () | 1863427..1863981 | - | 555 | WP_002493372.1 | phage major tail protein, TP901-1 family | - |
| ATM22_RS08800 () | 1864024..1864413 | - | 390 | WP_002493373.1 | hypothetical protein | - |
| ATM22_RS08805 () | 1864413..1864775 | - | 363 | WP_002493374.1 | HK97 gp10 family phage protein | - |
| ATM22_RS08810 () | 1864775..1865077 | - | 303 | WP_002493375.1 | hypothetical protein | - |
| ATM22_RS08815 () | 1865074..1865403 | - | 330 | WP_002493376.1 | phage head-tail connector protein | - |
| ATM22_RS08820 () | 1865405..1865674 | - | 270 | WP_002493377.1 | hypothetical protein | - |
| ATM22_RS08825 () | 1865696..1866622 | - | 927 | WP_002493378.1 | phage major capsid protein | - |
| ATM22_RS08830 () | 1866639..1867244 | - | 606 | WP_002493379.1 | DUF4355 domain-containing protein | - |
| ATM22_RS08835 () | 1867498..1867641 | - | 144 | WP_002493380.1 | hypothetical protein | - |
| ATM22_RS08840 () | 1867634..1868182 | - | 549 | WP_002493381.1 | hypothetical protein | - |
| ATM22_RS08845 () | 1868196..1869134 | - | 939 | WP_002493382.1 | minor capsid protein | - |
| ATM22_RS08850 () | 1869141..1870670 | - | 1530 | WP_002493383.1 | phage portal protein | - |
| ATM22_RS08855 () | 1870682..1871980 | - | 1299 | WP_002493384.1 | PBSX family phage terminase large subunit | - |
| ATM22_RS08860 () | 1871983..1872408 | - | 426 | WP_002493385.1 | terminase small subunit | - |
| ATM22_RS08865 () | 1872492..1872980 | - | 489 | WP_002493386.1 | hypothetical protein | - |
| ATM22_RS08870 () | 1873290..1873706 | - | 417 | WP_002493387.1 | hypothetical protein | - |
| ATM22_RS08875 () | 1873706..1874158 | - | 453 | WP_002493388.1 | hypothetical protein | - |
| ATM22_RS08880 () | 1874306..1874476 | - | 171 | WP_002493390.1 | hypothetical protein | - |
| ATM22_RS08885 () | 1874482..1874694 | - | 213 | WP_002493391.1 | DUF1381 domain-containing protein | - |
| ATM22_RS08890 () | 1874734..1875261 | - | 528 | WP_002493392.1 | dUTP diphosphatase | - |
| ATM22_RS08895 () | 1875262..1875468 | - | 207 | WP_002493393.1 | hypothetical protein | - |
| ATM22_RS08900 () | 1875461..1875805 | - | 345 | WP_002493394.1 | hypothetical protein | - |
| ATM22_RS08905 () | 1875847..1876110 | - | 264 | WP_002493395.1 | hypothetical protein | - |
| ATM22_RS08910 () | 1876299..1876775 | - | 477 | WP_002493397.1 | DUF3310 domain-containing protein | - |
| ATM22_RS08915 () | 1876772..1877131 | - | 360 | WP_002493398.1 | hypothetical protein | - |
| ATM22_RS08920 () | 1877132..1877539 | - | 408 | WP_002493399.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ATM22_RS08925 () | 1877578..1878465 | - | 888 | WP_002493400.1 | DnaD domain protein | - |
| ATM22_RS08930 () | 1878495..1878965 | - | 471 | WP_002493401.1 | single-stranded DNA-binding protein | - |
| ATM22_RS08935 () | 1878966..1879598 | - | 633 | WP_080035305.1 | MBL fold metallo-hydrolase | - |
| ATM22_RS08940 () | 1879664..1880599 | - | 936 | WP_002493403.1 | recombinase RecT | - |
| ATM22_RS08945 () | 1880601..1882553 | - | 1953 | WP_002493404.1 | AAA family ATPase | - |
| ATM22_RS08950 () | 1882622..1882798 | - | 177 | WP_002493405.1 | hypothetical protein | - |
| ATM22_RS08955 () | 1882864..1883073 | - | 210 | WP_001830281.1 | hypothetical protein | - |
| ATM22_RS08960 () | 1883086..1883805 | - | 720 | WP_002493406.1 | phage repressor protein | - |
| ATM22_RS08965 () | 1883855..1884094 | + | 240 | WP_002475580.1 | hypothetical protein | - |
| ATM22_RS08970 () | 1884084..1884263 | - | 180 | WP_002475588.1 | hypothetical protein | - |
| ATM22_RS08975 () | 1884277..1884516 | - | 240 | WP_002493407.1 | helix-turn-helix domain-containing protein | - |
| ATM22_RS08980 () | 1884710..1885039 | + | 330 | WP_002493408.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| ATM22_RS08985 () | 1885051..1885512 | + | 462 | WP_002493409.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| ATM22_RS08990 () | 1885544..1886050 | + | 507 | WP_033862683.1 | hypothetical protein | - |
| ATM22_RS08995 () | 1886052..1886633 | + | 582 | WP_002493411.1 | hypothetical protein | - |
| ATM22_RS09000 () | 1886696..1887745 | + | 1050 | WP_002493412.1 | IS91 family transposase ISCARN110 | Transposase |
| ATM22_RS09015 () | 1888147..1888722 | - | 576 | WP_002493413.1 | competence protein ComK | - |
| ATM22_RS09020 () | 1888937..1889155 | + | 219 | WP_001829292.1 | IDEAL domain-containing protein | - |
| ATM22_RS09025 () | 1889233..1890219 | - | 987 | WP_002493414.1 | lipoate--protein ligase | - |
| ATM22_RS09030 () | 1890424..1890609 | + | 186 | WP_001829339.1 | DUF2187 family protein | - |
| ATM22_RS09035 () | 1890615..1891217 | + | 603 | WP_001829312.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|