MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 141689 bp
Accession: NZ_CP060493 Location: 757636..899324 Organism: Bifidobacterium longum strain BIM B-813D Replicon: chromosome
Accession: NZ_CP060493 Location: 757636..899324 Organism: Bifidobacterium longum strain BIM B-813D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8S96_RS03110 () | 752869..756159 | + | 3291 | WP_007054413.1 | Ig-like domain-containing protein | - |
| H8S96_RS03115 () | 756401..757510 | + | 1110 | WP_016462844.1 | LacI family transcriptional regulator | - |
| H8S96_RS03120 () | 757622..758857 | - | 1236 | WP_187330835.1 | AGE family epimerase/isomerase | - |
| H8S96_RS03125 () | 758924..760222 | - | 1299 | WP_059280626.1 | glycoside hydrolase family 125 protein | - |
| H8S96_RS03130 () | 760497..760799 | - | 303 | WP_007054417.1 | hypothetical protein | - |
| H8S96_RS03135 () | 760866..760976 | - | 111 | WP_007054418.1 | hypothetical protein | - |
| H8S96_RS03140 () | 761084..761473 | - | 390 | WP_007054419.1 | VOC family protein | - |
| H8S96_RS03145 () | 761551..762447 | - | 897 | WP_007054420.1 | carbohydrate kinase | - |
| H8S96_RS03150 () | 762520..763734 | - | 1215 | WP_007052560.1 | ROK family transcriptional regulator | - |
| H8S96_RS03155 () | 763961..764875 | + | 915 | WP_187330836.1 | ROK family protein | - |
| H8S96_RS03160 () | 765025..766149 | - | 1125 | WP_007054423.1 | ROK family transcriptional regulator | - |
| H8S96_RS03165 () | 766487..767299 | + | 813 | WP_007052563.1 | glucosamine-6-phosphate deaminase | - |
| H8S96_RS03170 () | 767355..768638 | + | 1284 | WP_059280625.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| H8S96_RS03175 () | 768918..770552 | + | 1635 | WP_007057390.1 | ABC transporter substrate-binding protein | - |
| H8S96_RS03180 () | 770719..771810 | + | 1092 | WP_007052566.1 | ABC transporter permease | - |
| H8S96_RS03185 () | 771812..772981 | + | 1170 | WP_007052567.1 | ABC transporter permease | - |
| H8S96_RS03190 () | 772985..774694 | + | 1710 | WP_007052568.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| H8S96_RS03195 () | 774744..775265 | - | 522 | WP_007057255.1 | NUDIX domain-containing protein | - |
| H8S96_RS03200 () | 775314..776909 | - | 1596 | WP_011068002.1 | aminopeptidase P family protein | - |
| H8S96_RS03205 () | 777213..778064 | - | 852 | WP_007057256.1 | hypothetical protein | - |
| H8S96_RS03210 () | 779319..780923 | + | 1605 | WP_007052575.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| H8S96_RS03215 () | 780984..784661 | + | 3678 | WP_187330837.1 | chromosome segregation protein SMC | - |
| H8S96_RS03220 () | 784780..785775 | - | 996 | WP_187330838.1 | GNAT family N-acetyltransferase | - |
| H8S96_RS03225 () | 785897..787450 | - | 1554 | WP_007055255.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| H8S96_RS03230 () | 787625..788377 | + | 753 | WP_038426465.1 | sigma-70 family RNA polymerase sigma factor | - |
| H8S96_RS03235 () | 788377..788697 | + | 321 | WP_059280624.1 | hypothetical protein | - |
| H8S96_RS03240 () | 788963..789907 | - | 945 | WP_007055250.1 | aldose 1-epimerase family protein | - |
| H8S96_RS03245 () | 790032..790988 | - | 957 | WP_007054437.1 | aldose 1-epimerase family protein | - |
| H8S96_RS03250 () | 791213..792277 | + | 1065 | WP_187330839.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| H8S96_RS03255 () | 792711..793871 | - | 1161 | WP_080746366.1 | IS256 family transposase ISBibr1 | Transposase |
| H8S96_RS03260 () | 793996..795014 | - | 1019 | Protein_626 | IS30 family transposase ISBlo4 | Transposase |
| H8S96_RS03265 () | 795355..795816 | + | 462 | WP_124917273.1 | hypothetical protein | - |
| H8S96_RS03270 () | 795832..796542 | + | 711 | WP_131205542.1 | hypothetical protein | - |
| H8S96_RS03275 () | 796580..797041 | + | 462 | WP_131205543.1 | hypothetical protein | - |
| H8S96_RS03280 () | 797191..797700 | - | 510 | WP_059280504.1 | Cys-tRNA(Pro) deacylase | - |
| H8S96_RS03285 () | 797794..798852 | - | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| H8S96_RS03290 () | 799093..799818 | - | 726 | WP_007054441.1 | thiamine diphosphokinase | - |
| H8S96_RS03295 () | 800050..801054 | + | 1005 | WP_007054442.1 | fused MFS/spermidine synthase | - |
| H8S96_RS03300 () | 801339..802061 | + | 723 | WP_032735802.1 | translation initiation factor IF-3 | - |
| H8S96_RS03305 () | 802042..802236 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| H8S96_RS03310 () | 802289..802672 | + | 384 | WP_007052594.1 | 50S ribosomal protein L20 | - |
| H8S96_RS03315 () | 802742..803668 | + | 927 | WP_012471804.1 | Tyrosine recombinase XerD | VF |
| H8S96_RS03320 () | 803796..806642 | + | 2847 | WP_007054447.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| H8S96_RS03325 () | 806904..807743 | + | 840 | WP_007052597.1 | Nitrogenase iron protein | VF |
| H8S96_RS03330 () | 807762..808676 | + | 915 | WP_007052598.1 | segregation/condensation protein A | - |
| H8S96_RS03335 () | 808689..809405 | + | 717 | WP_007055260.1 | SMC-Scp complex subunit ScpB | - |
| H8S96_RS03340 () | 809537..810364 | + | 828 | WP_007052600.1 | NUDIX hydrolase | - |
| H8S96_RS03345 () | 810424..811704 | + | 1281 | WP_007052601.1 | quinolinate synthase NadA | - |
| H8S96_RS03350 () | 811796..813427 | + | 1632 | WP_007054450.1 | L-aspartate oxidase | - |
| H8S96_RS03355 () | 813431..814324 | + | 894 | WP_007052603.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| H8S96_RS03360 () | 814327..815574 | + | 1248 | WP_007054451.1 | cysteine desulfurase | - |
| H8S96_RS03365 () | 815606..816955 | + | 1350 | WP_007052605.1 | MFS transporter | - |
| H8S96_RS03370 () | 817206..819137 | + | 1932 | WP_007052606.1 | Elongation factor 4 | VF |
| H8S96_RS03375 () | 819237..819683 | + | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| H8S96_RS03380 () | 819763..820740 | + | 978 | WP_008783121.1 | chorismate mutase | - |
| H8S96_RS03385 () | 820698..821798 | + | 1101 | WP_077384343.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| H8S96_RS03390 () | 822008..822265 | + | 258 | WP_007052610.1 | hypothetical protein | - |
| H8S96_RS03395 () | 822300..823367 | + | 1068 | WP_007058378.1 | Tyrosine recombinase XerC | VF |
| H8S96_RS03400 () | 823619..825259 | + | 1641 | WP_007054457.1 | ABC transporter substrate-binding protein | - |
| H8S96_RS03405 () | 825560..826486 | + | 927 | WP_003832137.1 | ABC transporter permease | - |
| H8S96_RS03410 () | 826505..827509 | + | 1005 | WP_003832139.1 | ABC transporter permease | - |
| H8S96_RS03415 () | 827532..829541 | + | 2010 | WP_187330840.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| H8S96_RS03420 () | 829851..830711 | - | 861 | WP_007052617.1 | exodeoxyribonuclease III | - |
| H8S96_RS03425 () | 830836..831690 | + | 855 | WP_007055261.1 | DUF3710 domain-containing protein | - |
| H8S96_RS03430 () | 831706..832464 | + | 759 | WP_007055265.1 | DUF3159 domain-containing protein | - |
| H8S96_RS03435 () | 832454..833722 | + | 1269 | WP_187330864.1 | class I SAM-dependent RNA methyltransferase | - |
| H8S96_RS03440 () | 833734..834429 | + | 696 | WP_007055252.1 | hypothetical protein | - |
| H8S96_RS03445 () | 834520..837033 | + | 2514 | Protein_663 | HAD-IC family P-type ATPase | - |
| H8S96_RS03450 () | 837154..839853 | + | 2700 | WP_013582802.1 | aconitate hydratase AcnA | - |
| H8S96_RS03455 () | 839998..840360 | + | 363 | WP_007056210.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H8S96_RS03460 () | 840360..840851 | + | 492 | WP_007056214.1 | PIN domain-containing protein | Toxin Detail |
| H8S96_RS03465 () | 840913..843018 | - | 2106 | WP_013582801.1 | DUF262 domain-containing protein | - |
| H8S96_RS03470 () | 843108..843749 | - | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| H8S96_RS03475 () | 843789..844514 | - | 726 | WP_007056206.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| H8S96_RS03480 () | 844549..845781 | - | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| H8S96_RS03485 () | 846116..846961 | + | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| H8S96_RS03490 () | 847142..848041 | + | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| H8S96_RS03495 () | 848181..849197 | + | 1017 | WP_007052632.1 | DMT family transporter | - |
| H8S96_RS03500 () | 849230..849970 | - | 741 | WP_007056209.1 | hypothetical protein | VF |
| H8S96_RS03505 () | 850102..851556 | + | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| H8S96_RS03510 () | 851567..852553 | + | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| H8S96_RS03515 () | 852587..853336 | - | 750 | WP_007056215.1 | hypothetical protein | VF |
| H8S96_RS03520 () | 853548..856457 | + | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| H8S96_RS03525 () | 856634..857269 | + | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| H8S96_RS03530 () | 857281..857814 | + | 534 | WP_007052640.1 | CinA family protein | - |
| H8S96_RS03535 () | 857874..858389 | + | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| H8S96_RS03540 () | 858501..858734 | + | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| H8S96_RS03545 () | 859035..860228 | + | 1194 | WP_187330841.1 | recombinase RecA | - |
| H8S96_RS03550 () | 860231..860824 | + | 594 | WP_013140878.1 | RecX family transcriptional regulator | - |
| H8S96_RS03560 () | 861702..862364 | + | 663 | WP_187330842.1 | ribosome-associated translation inhibitor RaiA | - |
| H8S96_RS03565 () | 862526..865420 | + | 2895 | WP_049136979.1 | preprotein translocase subunit SecA | - |
| H8S96_RS03570 () | 865830..866967 | - | 1138 | Protein_687 | transposase | - |
| H8S96_RS03575 () | 867168..868214 | + | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
| H8S96_RS03580 () | 868455..869150 | - | 696 | WP_007058765.1 | hypothetical protein | - |
| H8S96_RS03585 () | 869211..869915 | + | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| H8S96_RS03590 () | 869967..872240 | - | 2274 | WP_011068042.1 | Serine/threonine-protein kinase PknD | VF |
| H8S96_RS03595 () | 872384..873466 | - | 1083 | WP_007058720.1 | polyprenyl synthetase family protein | - |
| H8S96_RS03600 () | 873673..874335 | + | 663 | WP_007052659.1 | DUF4192 family protein | - |
| H8S96_RS03605 () | 874538..875962 | + | 1425 | WP_007055162.1 | RNA polymerase sigma factor RpoD | VF |
| H8S96_RS03610 () | 876020..878296 | + | 2277 | WP_010080760.1 | type IIA DNA topoisomerase subunit B | - |
| H8S96_RS03615 () | 878656..879882 | + | 1227 | WP_007056778.1 | MFS transporter | - |
| H8S96_RS03620 () | 879926..880918 | + | 993 | WP_007056771.1 | ribokinase | - |
| H8S96_RS03625 () | 880934..885667 | + | 4734 | WP_058062643.1 | DEAD/DEAH box helicase | - |
| H8S96_RS03630 () | 885678..886466 | - | 789 | WP_007054494.1 | hypothetical protein | VF |
| H8S96_RS03635 () | 886611..889340 | - | 2730 | WP_187330843.1 | DNA topoisomerase IV subunit A | - |
| H8S96_RS03640 () | 889591..890859 | + | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| H8S96_RS03645 () | 890869..891960 | - | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| H8S96_RS03650 () | 892119..892412 | + | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| H8S96_RS03655 () | 892412..892888 | + | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| H8S96_RS03660 () | 893022..895346 | + | 2325 | WP_059280508.1 | hypothetical protein | VF |
| H8S96_RS03665 () | 895464..896318 | - | 855 | WP_081049826.1 | IS3 family transposase ISBlo3 | Transposase |
| H8S96_RS03670 () | 896318..896833 | - | 516 | WP_007054376.1 | IS3 family transposase ISBlo3 | Transposase |
| H8S96_RS03675 () | 896930..897469 | - | 540 | WP_059280506.1 | hypothetical protein | VF |
| H8S96_RS03680 () | 897542..898510 | - | 969 | WP_059280502.1 | hypothetical protein | - |
| H8S96_RS03685 () | 898894..899829 | - | 936 | WP_007052677.1 | DMT family transporter | - |
| H8S96_RS03690 () | 900108..900512 | + | 405 | WP_007052678.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| H8S96_RS03695 () | 900540..901835 | - | 1296 | WP_007057625.1 | hypothetical protein | - |
| H8S96_RS03700 () | 901904..902749 | + | 846 | WP_007052680.1 | histidine phosphatase family protein | - |
| H8S96_RS03705 () | 902896..903813 | + | 918 | WP_059280501.1 | magnesium transporter CorA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|