MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 28106 bp
Accession: NZ_CP060463 Location: 1..28106 Organism: Xanthomonas citri pv. citri strain DAR84832 Replicon: plasmid pXAS28
Accession: NZ_CP060463 Location: 1..28106 Organism: Xanthomonas citri pv. citri strain DAR84832 Replicon: plasmid pXAS28
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z70_RS23065 () | 1208..2029 | - | 822 | WP_033838015.1 | hypothetical protein | - |
| H8Z70_RS23070 () | 2534..2863 | - | 330 | WP_017159849.1 | hypothetical protein | - |
| H8Z70_RS23075 () | 3376..3657 | + | 282 | WP_017158359.1 | hypothetical protein | - |
| H8Z70_RS23080 () | 3686..4063 | + | 378 | WP_040245303.1 | TrbC/VirB2 family protein | - |
| H8Z70_RS23085 () | 4060..4359 | + | 300 | WP_007968751.1 | VirB3 family type IV secretion system protein | - |
| H8Z70_RS23090 () | 4382..7015 | + | 2634 | WP_017161281.1 | Type IV secretion system protein virB4 | VF |
| H8Z70_RS23095 () | 7012..7677 | + | 666 | WP_017161282.1 | hypothetical protein | - |
| H8Z70_RS23100 () | 7728..7943 | + | 216 | WP_017161283.1 | hypothetical protein | - |
| H8Z70_RS23105 () | 7936..8343 | + | 408 | WP_017161284.1 | hypothetical protein | - |
| H8Z70_RS23110 () | 8331..9197 | + | 867 | WP_017161285.1 | type IV secretion system protein | - |
| H8Z70_RS23115 () | 9194..9868 | + | 675 | WP_017161286.1 | type IV secretion system protein | - |
| H8Z70_RS23120 () | 9893..10675 | + | 783 | WP_017157765.1 | Type IV secretion system protein virB9 | VF |
| H8Z70_RS23125 () | 10677..11897 | + | 1221 | WP_017168840.1 | Type IV secretion system protein virB10 | VF |
| H8Z70_RS23130 () | 11908..12930 | + | 1023 | WP_045123784.1 | Type IV secretion system protein VirB11 | VF |
| H8Z70_RS23135 () | 12941..13828 | + | 888 | WP_039577931.1 | Type IV secretion system protein virB1 | VF |
| H8Z70_RS23140 () | 13874..14461 | + | 588 | WP_017161637.1 | hypothetical protein | - |
| H8Z70_RS23145 () | 14507..15082 | + | 576 | WP_039582731.1 | Phospholipase D | VF |
| H8Z70_RS23150 () | 15093..15506 | + | 414 | WP_039582729.1 | hypothetical protein | - |
| H8Z70_RS23155 () | 15560..15976 | + | 417 | WP_017159868.1 | hypothetical protein | - |
| H8Z70_RS23160 () | 16113..16340 | + | 228 | WP_039582726.1 | antitoxin MazE family protein | Antitoxin Detail |
| H8Z70_RS23165 () | 16327..16653 | + | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z70_RS23170 () | 16699..17343 | - | 645 | WP_039580900.1 | Abi family protein | - |
| H8Z70_RS23175 () | 17875..18177 | + | 303 | WP_017168787.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H8Z70_RS23180 () | 18247..21222 | - | 2976 | WP_045123782.1 | Multifunctional conjugation protein TraI | Relaxase |
| H8Z70_RS23185 () | 21236..22810 | - | 1575 | WP_045123781.1 | type IV secretion system DNA-binding domain-containing protein | - |
| H8Z70_RS23190 () | 22814..22987 | - | 174 | WP_162886871.1 | hypothetical protein | - |
| H8Z70_RS23195 () | 22987..23382 | - | 396 | WP_039447651.1 | hypothetical protein | - |
| H8Z70_RS23200 () | 23772..24218 | + | 447 | WP_033483209.1 | hypothetical protein | - |
| H8Z70_RS23205 () | 24215..24922 | + | 708 | WP_045123792.1 | hypothetical protein | - |
| H8Z70_RS23210 () | 24968..25321 | + | 354 | WP_033481414.1 | hypothetical protein | - |
| H8Z70_RS23215 () | 25459..25740 | - | 282 | WP_040245198.1 | type II toxin-antitoxin system YafQ family toxin | - |
| H8Z70_RS23220 () | 25727..25996 | - | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| H8Z70_RS23225 () | 26105..27073 | - | 969 | WP_040245200.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| H8Z70_RS23230 () | 27625..27906 | - | 282 | WP_017161425.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|