MGE detailed information
MGE type: Genomic_island MGE length: 21478 bp
Accession: NZ_CP060460 Location: 2438233..2459710 Organism: Xanthomonas citri pv. citri strain DAR84832 Replicon: chromosome
Accession: NZ_CP060460 Location: 2438233..2459710 Organism: Xanthomonas citri pv. citri strain DAR84832 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z70_RS10385 () | 2434513..2437131 | - | 2619 | WP_015472106.1 | DNA ligase D | - |
| H8Z70_RS10390 () | 2437147..2437323 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| H8Z70_RS10395 () | 2437543..2437944 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| H8Z70_RS10405 () | 2438233..2439324 | + | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H8Z70_RS10410 () | 2440217..2442388 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| H8Z70_RS10415 () | 2442398..2442919 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| H8Z70_RS10420 () | 2443784..2444740 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| H8Z70_RS10425 () | 2444807..2445940 | - | 1134 | Protein_2044 | IS5 family transposase ISXo4 | Transposase |
| H8Z70_RS10430 () | 2445980..2447067 | - | 1088 | Protein_2045 | IS3 family transposase ISXcd1 | Transposase |
| H8Z70_RS10435 () | 2447280..2447459 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| H8Z70_RS10440 () | 2447730..2448044 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| H8Z70_RS10445 () | 2448047..2448337 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H8Z70_RS10450 () | 2448325..2448603 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| H8Z70_RS10455 () | 2448773..2450041 | - | 1269 | Protein_2050 | Tn3 family transposase ISPsy42 | Transposase |
| H8Z70_RS10460 () | 2450090..2451315 | + | 1226 | Protein_2051 | IS3 family transposase ISJsp1 | Transposase |
| H8Z70_RS10465 () | 2451934..2452890 | + | 957 | WP_197707729.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| H8Z70_RS10470 () | 2453080..2455188 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| H8Z70_RS10475 () | 2455239..2455427 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| H8Z70_RS10480 () | 2455424..2457010 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| H8Z70_RS10485 () | 2457007..2457924 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| H8Z70_RS10490 () | 2457933..2458262 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| H8Z70_RS10495 () | 2458366..2458780 | + | 415 | Protein_2058 | plasmid pRiA4b ORF-3 family protein | - |
| H8Z70_RS10500 () | 2458803..2459135 | - | 333 | WP_203165057.1 | hypothetical protein | - |
| H8Z70_RS10505 () | 2459179..2459373 | + | 195 | Protein_2060 | IS4 family transposase ISXac1 | Transposase |
| H8Z70_RS10510 () | 2459444..2460531 | + | 1088 | WP_087944898.1 | IS3 family transposase | - |
| H8Z70_RS10515 () | 2460570..2461592 | + | 1023 | Protein_2062 | IS4-like element ISXac1 family transposase | - |
| H8Z70_RS10520 () | 2461978..2463807 | - | 1830 | WP_045123452.1 | hypothetical protein | - |
| H8Z70_RS10525 () | 2463821..2464420 | - | 600 | WP_003489210.1 | NfuA family Fe-S biogenesis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|